RNA–Protein interactions for RNA: ENSMUST00000053932.6

Gm28230-201, Transcript of Predicted gene 28230, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gm28230, Length 3,527 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28230-201ENSMUST00000053932 Zc3h13E9Q784 1729 aaKnown RBP17.09■□□□□ 0.33
Gm28230-201ENSMUST00000053932 Kif24Q6NWW5 1356 aa17.09■□□□□ 0.33
Gm28230-201ENSMUST00000053932 Pik3r4Q8VD65 1358 aa17.09■□□□□ 0.33
Gm28230-201ENSMUST00000053932 Kcna6Q61923 529 aa17.08■□□□□ 0.33
Gm28230-201ENSMUST00000053932 Lmod3E9QA62 571 aa17.08■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Swt1Q9DBQ9 907 aa17.08■□□□□ 0.32
Gm28230-201ENSMUST00000053932 DnmbpQ6TXD4 1580 aa17.08■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Rreb1Q3UH06 1700 aaKnown RBP17.08■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Tmem2Q5FWI3 1383 aa17.08■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Cavin4A2AMM0 362 aa17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Ppp2r3aB2RXC8 1150 aa17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 G3bp1P97855 465 aaKnown RBP17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Gimap6Q8K349 305 aa17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Cog6Q8R3I3 657 aa17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Tex14Q7M6U3 1450 aa17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Q3TQI7 289 aaKnown RBP17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Ppp1r9bQ6R891 817 aaKnown RBP17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Speer4bQ9D9F7 267 aa17.07■□□□□ 0.32
Gm28230-201ENSMUST00000053932 NktrP30415 1453 aa17.06■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Maco1Q7TQE6 664 aaKnown RBP17.06■□□□□ 0.32
Gm28230-201ENSMUST00000053932 OptnQ8K3K8 584 aa17.06■□□□□ 0.32
Gm28230-201ENSMUST00000053932 MaddQ80U28 1577 aa17.06■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Plcd3Q8K2J0 785 aa17.05■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Ripk4Q9ERK0 786 aa17.05■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Trim28Q62318 834 aa17.05■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Chmp4bQ9D8B3 224 aaKnown RBP17.05■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Usp19Q3UJD6 1360 aa17.05■□□□□ 0.32
Gm28230-201ENSMUST00000053932 PtpruB1AUH1 1446 aa17.05■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Gm21680A0A0G2JGR8 267 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 VgfQ0VGU4 617 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Eif2ak4Q9QZ05 1648 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Gprasp1Q5U4C1 1347 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Setd1aE9PYH6 1716 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Fkbp4P30416 458 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Mcm4P49717 862 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Brwd3A2AHJ4 1799 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Ift172Q6VH22 1749 aa17.04■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Sf3b2Q3UJB0 878 aaKnown RBP17.03■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Slc5a4bQ91ZP4 660 aa17.03■□□□□ 0.32
Gm28230-201ENSMUST00000053932 AU019823E9PUQ3 292 aa17.03■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Gys2Q8VCB3 704 aa17.02■□□□□ 0.32
Gm28230-201ENSMUST00000053932 Zpr1Q62384 459 aa17.02■□□□□ 0.31
Gm28230-201ENSMUST00000053932 C3P01027 1663 aa17.02■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Lekr1B2RVN1 116 aa17.01■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Cdc37l1Q9CZP7 335 aa17.01■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Map7O88735 730 aa17.01■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Tmem132aQ922P8 1018 aa17.01■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Usp32F8VPZ3 1604 aa17.01■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Abcc10Q8R4P9 1501 aa17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Bcl9Q9D219 1425 aa17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Sptbn5F6UCX4 1208 aa17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 HdgfP51859 237 aaKnown RBP17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 RgmbQ7TQ33 436 aa17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Nol11Q8BJW5 723 aaKnown RBP17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Kcnh5Q920E3 988 aa17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Sugp2Q8CH09 1067 aa17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Gemin5Q8BX17 1502 aaKnown RBP17■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Sgsm1Q8BPQ7 1093 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 HypkQ9CR41 129 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Astn2Q80Z10 1352 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 CrklP47941 303 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Tfip11Q9ERA6 838 aaKnown RBP16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Sipa1l1Q8C0T5 1782 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Rabep1O35551 862 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Dmrt2Q8BG36 561 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Kif18aQ91WD7 886 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Rimbp3Q3V0F0 1606 aa16.99■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Dnajc14Q921R4 703 aa16.98■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Erbb4Q61527 1308 aa16.98■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Triml2E9PW10 424 aa16.98■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Map4k4P97820 1233 aaKnown RBP16.98■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Larp1Q6ZQ58 1072 aaKnown RBP16.97■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Cps1Q8C196 1500 aa16.97■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Gm21663A0A0G2JE01 267 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Gm7361D3Z6R1 267 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 5031410I06RikE9Q4E0 267 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Gm1979E9QAN3 267 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Gm5862K7N5V5 267 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Gm10220K7N660 267 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Ssh1Q76I79 1042 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Nek4Q9Z1J2 792 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Erich6bQ9D4S6 220 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Nyap1Q6PFX7 833 aa16.96■□□□□ 0.31
Gm28230-201ENSMUST00000053932 Aifm3Q3TY86 605 aa16.95■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Catsper2A2ARP9 588 aa16.95■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Nrxn3Q6P9K9 1571 aa16.95■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Dhx16G3X8X0 1044 aaKnown RBP16.95■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Chmp7Q8R1T1 451 aa16.95■□□□□ 0.3
Gm28230-201ENSMUST00000053932 KnstrnQ9D9Z1 312 aaKnown RBP16.95■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Chd4Q6PDQ2 1915 aaKnown RBP16.94■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Nrxn1Q9CS84 1514 aa16.94■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Znf326O88291 580 aa16.93■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Zhx1P70121 873 aa16.93■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Gse1Q3U3C9 1213 aa16.93■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Ltbp4Q8K4G1 1666 aa16.93■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Cers3Q1A3B0 383 aa16.93■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Nkx2-3P97334 362 aa16.92■□□□□ 0.3
Gm28230-201ENSMUST00000053932 TkfcQ8VC30 578 aa16.92■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Bcl2l12Q9D3J3 255 aa16.92■□□□□ 0.3
Gm28230-201ENSMUST00000053932 Atf7ipQ7TT18 1306 aa16.92■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms