RNA–Protein interactions for RNA: ENSMUST00000053716.7

Clrn3-201, Transcript of Clarin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn3, Length 3,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3-201ENSMUST00000053716 Aldh8a1Q8BH00 487 aa8.16□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Ppp1r37Q8BKR5 712 aa8.16□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Smarca5Q91ZW3 1051 aaKnown RBP8.16□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Ppp6r3Q922D4 844 aa8.16□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Yeats2Q3TUF7 1407 aa8.16□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Kif24Q6NWW5 1356 aa8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Chd4Q6PDQ2 1915 aaKnown RBP8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Anapc15-psA0A140T8L6 141 aa8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Aifm3Q3TY86 605 aa8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 MarsQ68FL6 902 aaKnown RBP8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 HnrnpuQ8VEK3 800 aaKnown RBP8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 CatipB9EKE5 520 aa8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Dhx16G3X8X0 1044 aaKnown RBP8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Ddrgk1Q80WW9 315 aa8.15□□□□□ -1.1
Clrn3-201ENSMUST00000053716 Kif1aP33173 1695 aa8.15□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Erich6bQ9D4S6 220 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Synj2Q9D2G5 1434 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Pdia3P27773 505 aaKnown RBP8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Nucb1Q02819 459 aaKnown RBP8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Zkscan1Q8BGS3 561 aaKnown RBP8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Gcc1Q9D4H2 778 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Nwd1A6H603 1563 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 1700019A02RikA0A087WPV9 146 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 PtmaP26350 111 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Fam13aQ8BGI4 693 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Rsph6aQ8CDR2 708 aa8.14□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Cavin2Q63918 418 aaKnown RBP8.13□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Rab11fip3Q8CHD8 1047 aa8.13□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Sos1Q62245 1319 aa8.13□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Plekhg1F6S200 1446 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Tm6sf1P58749 370 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Cyp27a1Q9DBG1 533 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Gdpd2Q9ESM6 539 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Mcm2P97310 904 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Clcn1Q64347 994 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Aldh1l2Q8K009 923 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Asxl2Q8BZ32 1370 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Itsn1Q9Z0R4 1714 aa8.12□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Pibf1E9Q6K3 756 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 ImpactO55091 318 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Zdhhc9P59268 364 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 4930407I10RikD3Z5T8 1512 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Erbb4Q61527 1308 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Elp1Q7TT37 1333 aaKnown RBP8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Gm9992B2RWK3 458 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Prkar2bP31324 416 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 CalcaP70160 136 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Unc93aQ710D3 458 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Q9D2X8 372 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Atg4a-psA0A0G2JFS9 396 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 MpripP97434 1024 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Atg4aQ8C9S8 396 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 4931400O07RikQ9D4M5 137 aa8.11□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Tpm2P58774 284 aa8.1□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Rbm10Q99KG3 930 aaKnown RBP8.1□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Stk31Q99MW1 1018 aa8.1□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Chmp4cQ9D7F7 232 aa8.1□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Cyp46a1Q9WVK8 500 aa8.1□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Cc2d1aQ8K1A6 943 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Zkscan16A2ALW2 728 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Pdia4P08003 638 aaKnown RBP8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Chl1P70232 1209 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Idi2Q8BFZ6 227 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 NpatQ8BMA5 1420 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Syce3B5KM66 88 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Eif4a2P10630 407 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Erc2Q6PH08 957 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 NgefQ8CHT1 710 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Bcar3Q9QZK2 820 aa8.09□□□□□ -1.11
Clrn3-201ENSMUST00000053716 Zc3h13E9Q784 1729 aaKnown RBP8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Nkx1-1G3UXB3 402 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 VgfQ0VGU4 617 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Rbm27Q5SFM8 1060 aaKnown RBP8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 ScaperF8VQ70 1398 aaKnown RBP8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Gadd45bP22339 160 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Pank2Q3U4S0 443 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Ggnbp2Q5SV77 696 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Afap1Q80YS6 731 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Prune1Q8BIW1 454 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Ripk4Q9ERK0 786 aa8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Mrps27Q8BK72 415 aaKnown RBP8.08□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Adgrb1Q3UHD1 1582 aa8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Tex2Q6ZPJ0 1128 aaKnown RBP8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Ush1cQ9ES64 910 aa8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Parp14Q2EMV9 1817 aa8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Tnrc6bQ8BKI2 1810 aaKnown RBP8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 NexnQ7TPW1 607 aa8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Rnf214Q8BFU3 668 aaKnown RBP8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Fez1Q8K0X8 392 aa8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Gemin5Q8BX17 1502 aaKnown RBP8.07□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Mknk2Q8CDB0 459 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Vwa3bJ9JI28 736 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 RestQ8VIG1 1082 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 PtmsQ9D0J8 101 aaKnown RBP8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 PtpruB1AUH1 1446 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Phactr2B1AVP0 632 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Zfp777B9EKF4 885 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Pdcl2Q78Y63 240 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Tet3Q8BG87 1668 aa8.06□□□□□ -1.12
Clrn3-201ENSMUST00000053716 Cdk12Q14AX6 1484 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms