RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Uggt2E9Q4X2 1504 aa18.24■□□□□ 0.51
Usp38-201ENSMUST00000042724 Ppp1r42Q8R1Z4 357 aa18.24■□□□□ 0.51
Usp38-201ENSMUST00000042724 Kif3aP28741 701 aa18.24■□□□□ 0.51
Usp38-201ENSMUST00000042724 Tmem132eQ6IEE6 982 aa18.24■□□□□ 0.51
Usp38-201ENSMUST00000042724 Ccdc155Q80VJ8 648 aa18.24■□□□□ 0.51
Usp38-201ENSMUST00000042724 Plcd4Q8K3R3 807 aa18.23■□□□□ 0.51
Usp38-201ENSMUST00000042724 Top1mtQ8R4U6 593 aa18.23■□□□□ 0.51
Usp38-201ENSMUST00000042724 Edc4Q3UJB9 1406 aaKnown RBP18.23■□□□□ 0.51
Usp38-201ENSMUST00000042724 Rec8Q8C5S7 591 aa18.23■□□□□ 0.51
Usp38-201ENSMUST00000042724 Ankrd44B2RXR6 993 aa18.23■□□□□ 0.51
Usp38-201ENSMUST00000042724 Tubb6Q922F4 447 aa18.23■□□□□ 0.51
Usp38-201ENSMUST00000042724 Eif4a2P10630 407 aa18.22■□□□□ 0.51
Usp38-201ENSMUST00000042724 Nlrp3Q8R4B8 1033 aa18.22■□□□□ 0.51
Usp38-201ENSMUST00000042724 FosbP13346 338 aa18.22■□□□□ 0.51
Usp38-201ENSMUST00000042724 Washc4Q3UMB9 1173 aa18.22■□□□□ 0.51
Usp38-201ENSMUST00000042724 Ppip5k2Q6ZQB6 1129 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 A0A1L1SQF0 893 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 Sytl4Q9R0Q1 673 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 Polr3gQ6NXY9 223 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 Mical1Q8VDP3 1048 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 NgdnQ9DB96 315 aaKnown RBP18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 Ush1cQ9ES64 910 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 Jmjd4Q8BFT6 427 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 Gimap5Q8BWF2 308 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 BccipQ9CWI3 316 aa18.21■□□□□ 0.51
Usp38-201ENSMUST00000042724 PzpQ61838 1495 aa18.21■□□□□ 0.5
Usp38-201ENSMUST00000042724 Gpatch3Q8BIY1 525 aa18.2■□□□□ 0.5
Usp38-201ENSMUST00000042724 Kdm5cP41230 1554 aa18.2■□□□□ 0.5
Usp38-201ENSMUST00000042724 Ddx58Q6Q899 926 aa18.19■□□□□ 0.5
Usp38-201ENSMUST00000042724 Smarca5Q91ZW3 1051 aaKnown RBP18.19■□□□□ 0.5
Usp38-201ENSMUST00000042724 Calcoco2A2A6M5 331 aa18.19■□□□□ 0.5
Usp38-201ENSMUST00000042724 Irf9Q61179 399 aa18.19■□□□□ 0.5
Usp38-201ENSMUST00000042724 Tfip11Q9ERA6 838 aaKnown RBP18.19■□□□□ 0.5
Usp38-201ENSMUST00000042724 Abl1P00520 1123 aa18.18■□□□□ 0.5
Usp38-201ENSMUST00000042724 Map3k19E9Q3S4 1311 aa18.18■□□□□ 0.5
Usp38-201ENSMUST00000042724 Ehmt1Q5DW34 1296 aa18.18■□□□□ 0.5
Usp38-201ENSMUST00000042724 Rbm28Q8CGC6 750 aaKnown RBP18.18■□□□□ 0.5
Usp38-201ENSMUST00000042724 Slc26a8Q8R0C3 999 aa18.18■□□□□ 0.5
Usp38-201ENSMUST00000042724 Pde4dQ01063 747 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Amotl2Q8K371 772 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Amotl1Q9D4H4 968 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 GpkowQ56A08 488 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 NaspQ99MD9 773 aaKnown RBP18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Pik3r4Q8VD65 1358 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Pde4bB1AWC9 736 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Slc5a4bQ91ZP4 660 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Gpatch11Q3UFS4 262 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Vps53Q8CCB4 832 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Echdc1Q9D9V3 322 aa18.17■□□□□ 0.5
Usp38-201ENSMUST00000042724 Znf608Q56A10 1511 aa18.16■□□□□ 0.5
Usp38-201ENSMUST00000042724 Klhdc4Q921I2 584 aa18.16■□□□□ 0.5
Usp38-201ENSMUST00000042724 Trim29Q8R2Q0 587 aa18.16■□□□□ 0.5
Usp38-201ENSMUST00000042724 Kri1Q8VDQ9 704 aaKnown RBP18.16■□□□□ 0.5
Usp38-201ENSMUST00000042724 Trim30aP15533 496 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Aplp1Q03157 653 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Soga3Q6NZL0 945 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Brf1Q8CFK2 676 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Erc1Q99MI1 1120 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Gtf3c3Q3TMP1 882 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Dnajc10Q9DC23 793 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Klc3Q91W40 508 aa18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Rrs1Q9CYH6 365 aaKnown RBP18.15■□□□□ 0.5
Usp38-201ENSMUST00000042724 Phlpp2Q8BXA7 1320 aa18.14■□□□□ 0.5
Usp38-201ENSMUST00000042724 Cavin2Q63918 418 aaKnown RBP18.14■□□□□ 0.5
Usp38-201ENSMUST00000042724 Ankle2Q6P1H6 964 aa18.14■□□□□ 0.49
Usp38-201ENSMUST00000042724 Usp54Q8BL06 1588 aaKnown RBP18.14■□□□□ 0.49
Usp38-201ENSMUST00000042724 Exoc5Q3TPX4 708 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 Duxf3A0A0N4SV92 674 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 Map3k2Q61083 619 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 AnkarA2RT91 1465 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 Kiaa0754Q69ZZ9 979 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 Dmrt2Q8BG36 561 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 Hook1Q8BIL5 728 aa18.13■□□□□ 0.49
Usp38-201ENSMUST00000042724 Plch2A2AP18 1501 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Tpm1P58771 284 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Cers3Q1A3B0 383 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Hnrnpul1Q8VDM6 859 aaKnown RBP18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Tpm3P21107 285 aaKnown RBP18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Ubxn4Q8VCH8 506 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Riok1Q922Q2 567 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Sugp2Q8CH09 1067 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Gm16486A0A1D5RMD1 1434 aa18.12■□□□□ 0.49
Usp38-201ENSMUST00000042724 Kdm6bQ5NCY0 1641 aa18.11■□□□□ 0.49
Usp38-201ENSMUST00000042724 Hmgn5Q9JL35 406 aa18.11■□□□□ 0.49
Usp38-201ENSMUST00000042724 Kif1bQ60575 1816 aaKnown RBP18.11■□□□□ 0.49
Usp38-201ENSMUST00000042724 Tpm2P58774 284 aa18.11■□□□□ 0.49
Usp38-201ENSMUST00000042724 Bag3Q9JLV1 577 aaKnown RBP18.11■□□□□ 0.49
Usp38-201ENSMUST00000042724 Ccdc173A0JLY1 547 aa18.11■□□□□ 0.49
Usp38-201ENSMUST00000042724 Myd88P22366 296 aa18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Strn4P58404 760 aa18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Gabpb2P81069 414 aa18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Ell2Q3UKU1 639 aa18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Bicdl1A0JNT9 577 aa18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Rnf214Q8BFU3 668 aaKnown RBP18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Smc2Q8CG48 1191 aaKnown RBP18.1■□□□□ 0.49
Usp38-201ENSMUST00000042724 Fam83gQ5SWY7 812 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 Tmem87bQ8BKU8 555 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 Col17a1Q07563 1470 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 Eya1P97767 591 aa18.09■□□□□ 0.49
Usp38-201ENSMUST00000042724 Gnat3Q3V3I2 354 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms