RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Txndc2Q6P902 515 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Lrrc45Q8CIM1 670 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Tceal9Q9DD24 104 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Atp2b2Q9R0K7 1198 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Mybbp1aQ7TPV4 1344 aaKnown RBP5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Kiaa0556Q8C753 1610 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 HmmrQ00547 794 aaKnown RBP5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Usp54Q8BL06 1588 aaKnown RBP5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Tulp4Q9JIL5 1547 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Pcmtd1P59913 357 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Sass6Q80UK7 654 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 PogkQ80TC5 607 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Erlin2Q8BFZ9 340 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Dbr1Q923B1 550 aa5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Psma5Q9Z2U1 241 aaKnown RBP5.42□□□□□ -1.54
Prkdc-201ENSMUST00000023352 AppP12023 770 aa5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Morc2aQ69ZX6 1030 aa5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Rhot2Q8JZN7 620 aa5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Zkscan2G3X952 960 aa5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Ppp1r9bQ6R891 817 aaKnown RBP5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Cluap1Q8R3P7 413 aa5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 MicalclQ9D5U9 680 aa5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Fam193aQ8CGI1 1231 aaKnown RBP5.41□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Tubb5P99024 444 aaKnown RBP5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Rassf4Q8CB96 322 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Akap12Q9WTQ5 1684 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 ItpripQ3TNL8 555 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Nucb2P81117 420 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Cep112Q5PR68 954 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Phldb2Q8K1N2 1249 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Adgrb3Q80ZF8 1522 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Mctp2Q5RJH2 878 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Apbb1Q9QXJ1 710 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Arhgap23Q69ZH9 1483 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Tshz1Q5DTH5 1084 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Ddx19aQ61655 478 aaKnown RBP5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Usp19Q3UJD6 1360 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Hvcn1Q3U2S8 269 aa5.4□□□□□ -1.54
Prkdc-201ENSMUST00000023352 Nat10Q8K224 1024 aaKnown RBP5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 MaddQ80U28 1577 aa5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ccdc146E9Q9F7 977 aa5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 CgnP59242 1191 aa5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 HypkQ9CR41 129 aa5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Rbm25B2RY56 838 aaKnown RBP5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 U2surpQ6NV83 1029 aaKnown RBP5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Itgb1bp2Q9R000 350 aa5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Pik3r4Q8VD65 1358 aa5.4□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Shq1Q7TMX5 569 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 4930407I10RikD3Z5T8 1512 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Tecpr2Q3UH45 1423 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Lmtk3Q5XJV6 1424 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Utp3Q9JI13 469 aaKnown RBP5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Gabpb2P81069 414 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Mterf4Q8BVN4 346 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Vps53Q8CCB4 832 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Aldh1l2Q8K009 923 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ktn1Q61595 1327 aaKnown RBP5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Arid4aF8VPQ2 1261 aaKnown RBP5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Vgll3P85442 326 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Paf1Q8K2T8 535 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Bicd2Q921C5 820 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Col17a1Q07563 1470 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Lrrc7Q80TE7 1490 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Dixdc1Q80Y83 711 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Iqca1Q9CUL5 857 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ercc3P49135 783 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Gpatch11Q3UFS4 262 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ggt6Q6PDE7 497 aa5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ccdc43Q9CR29 222 aaKnown RBP5.39□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Rbm27Q5SFM8 1060 aaKnown RBP5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ncbp1Q3UYV9 790 aaKnown RBP5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ssh1Q76I79 1042 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ints3Q7TPD0 1041 aaKnown RBP5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Calcoco1Q8CGU1 691 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Clstn1Q9EPL2 979 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 MvpQ9EQK5 861 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Tmco5bQ80X59 307 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Krt82Q99M74 516 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Gpatch3Q8BIY1 525 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Rbm10Q99KG3 930 aaKnown RBP5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Tmco3Q8BH01 678 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Hook3Q8BUK6 718 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 NexnQ7TPW1 607 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 ZgpatQ8VDM1 511 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 DesP31001 469 aaKnown RBP5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Spata24Q6P926 205 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 StambpQ9CQ26 424 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Sirt1Q923E4 737 aa5.38□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Arid3cA6PWV5 409 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cplx1P63040 134 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ppp1r1bQ60829 194 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 CenpqQ9CPQ5 267 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Naip7Q9JIB3 1402 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Irx4Q9QY61 515 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Uspl1Q3ULM6 1089 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Tnpo1Q8BFY9 898 aaKnown RBP5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Kcnh5Q920E3 988 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Lrrfip1Q3UZ39 729 aaKnown RBP5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 MyclP10166 368 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Paxbp1P58501 919 aa5.37□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms