RNA–Protein interactions for RNA: ENSMUST00000002678.9

Tgfb1-201, Transcript of Transforming growth factor beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tgfb1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1-201ENSMUST00000002678 Senp3Q9EP97 568 aaKnown RBP22.38■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Ubr1O70481 1757 aa22.38■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Triml2E9PW10 424 aa22.37■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 TmpoQ61033 693 aaKnown RBP22.37■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Frmpd2A0A140LI67 1392 aa22.37■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Q3UJC8 639 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 FanclQ9CR14 375 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Col16a1Q8BLX7 1580 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Pik3c2aQ61194 1686 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Ccdc146E9Q9F7 977 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Aifm3Q3TY86 605 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Plin1Q8CGN5 517 aa22.36■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Kif20aP97329 887 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 GorabQ8BRM2 368 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Dnttip2Q8R2M2 758 aaKnown RBP22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Trpm3Q5F4S9 1721 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Mon2Q80TL7 1715 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Ptpn23Q6PB44 1692 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 AU015836B2RUM3 263 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 EngaseQ8BX80 734 aa22.35■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Bcl9Q9D219 1425 aa22.34■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Scn7aB1AYL1 1681 aa22.34■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Spryd3E9Q9B3 442 aa22.34■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Ppp6r3Q922D4 844 aa22.34■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Plcb2A3KGF7 1181 aa22.33■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Ppip5k2Q6ZQB6 1129 aa22.33■■□□□ 1.17
Tgfb1-201ENSMUST00000002678 Nucb1Q02819 459 aaKnown RBP22.33■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Abcc10Q8R4P9 1501 aa22.32■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 MyclP10166 368 aa22.32■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Prkar2bP31324 416 aa22.32■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Igsf1Q7TQA1 1317 aa22.32■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 D430041D05RikF6ZGR6 1678 aa22.32■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Elp1Q7TT37 1333 aaKnown RBP22.32■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Fgd1P52734 960 aa22.31■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Map2P20357 1828 aa22.31■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Rad17Q6NXW6 688 aa22.31■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Casq1O09165 405 aa22.3■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Pdia3P27773 505 aaKnown RBP22.3■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 ScaperF8VQ70 1398 aaKnown RBP22.29■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Camta1A2A891 1682 aa22.29■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Rnf123Q5XPI3 1314 aa22.29■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Rtf1A2AQ19 715 aaKnown RBP22.28■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Msh6P54276 1358 aaKnown RBP22.28■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 1700019A02RikA0A087WPV9 146 aa22.28■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 Lmtk3Q5XJV6 1424 aa22.27■■□□□ 1.16
Tgfb1-201ENSMUST00000002678 FancaQ9JL70 1439 aa22.27■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Atg4a-psA0A0G2JFS9 396 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Ggnbp2Q5SV77 696 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 GphnQ8BUV3 769 aaKnown RBP22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Atg4aQ8C9S8 396 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 C5P06684 1680 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Als2Q920R0 1651 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Parp14Q2EMV9 1817 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Sv2bQ8BG39 683 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Cyp46a1Q9WVK8 500 aa22.26■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Scaf1Q5U4C3 1256 aaKnown RBP22.24■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Smarca5Q91ZW3 1051 aaKnown RBP22.24■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 PtprvP70289 1705 aa22.24■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Dennd6aQ8BH65 605 aa22.23■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Pdcl3Q8BVF2 240 aa22.23■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Il4rP16382 810 aa22.23■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Prim1P20664 417 aa22.23■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Eya1P97767 591 aa22.22■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Ap3b2Q9JME5 1082 aa22.22■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Hoxa7P02830 229 aa22.22■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Nlgn1Q99K10 843 aa22.22■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Amer1Q7TS75 1132 aa22.21■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Zkscan1Q8BGS3 561 aaKnown RBP22.21■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Foxp4Q9DBY0 795 aaKnown RBP22.21■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Topaz1E5FYH1 1653 aa22.2■■□□□ 1.15
Tgfb1-201ENSMUST00000002678 Pibf1E9Q6K3 756 aa22.2■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Gnai2P08752 355 aaKnown RBP22.2■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Mrps27Q8BK72 415 aaKnown RBP22.2■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Bag4Q8CI61 457 aa22.19■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Alpk3Q924C5 1678 aa22.19■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Erc2Q6PH08 957 aa22.19■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 NgefQ8CHT1 710 aa22.19■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 MlecQ6ZQI3 291 aaKnown RBP22.18■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Bloc1s4Q8VED2 215 aa22.18■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Cyp27a1Q9DBG1 533 aa22.18■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Dmrtc1Q9D9R7 182 aa22.18■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Zkscan2G3X952 960 aa22.17■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Idi1P58044 227 aa22.17■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 PtmsQ9D0J8 101 aaKnown RBP22.17■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Stk36Q69ZM6 1316 aa22.17■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Nphp1Q9QY53 687 aa22.16■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Cabp4Q8VHC5 271 aa22.16■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Q9D2X8 372 aa22.16■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Atf5O70191 283 aa22.15■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Fam83gQ5SWY7 812 aa22.15■■□□□ 1.14
Tgfb1-201ENSMUST00000002678 Snap23O09044 210 aa22.14■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 HypkQ9CR41 129 aa22.14■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Gm21190A0A0G2JGJ6 266 aa22.14■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Mmp8O70138 465 aa22.14■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 DekQ7TNV0 380 aaKnown RBP22.14■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Gtf2a1Q99PM3 378 aa22.14■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Ahnak2E9PYB0 1738 aaKnown RBP22.13■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Arfgef2A2A5R2 1792 aa22.13■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Q3TQI7 289 aaKnown RBP22.13■■□□□ 1.13
Tgfb1-201ENSMUST00000002678 Ano8Q6PB70 1060 aa22.13■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms