RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 TRIM23P36406 574 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 GNPDA1P46926 289 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 POLR2LP62875 67 aaKnown RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 NFKB2Q00653 900 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 SLC10A7Q0GE19 358 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 RFTN1Q14699 578 aaPredicted RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 C16orf72Q14CZ0 275 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 CNGA3Q16281 694 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 PLEKHA7Q6IQ23 1121 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 RBM43Q6ZSC3 357 aaKnown RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 APTXQ7Z2E3 356 aaKnown RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 IRF2BP2Q7Z5L9 587 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 HEATR4Q86WZ0 1026 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 ZDHHC1Q8WTX9 485 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 PTCD2Q8WV60 388 aaKnown RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 JPH3Q8WXH2 748 aaPredicted RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 COQ10AQ96MF6 247 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 CMKLR1Q99788 373 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 SYT11Q9BT88 431 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 FAM117AQ9C073 453 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 CLMPQ9H6B4 373 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 PHPT1Q9NRX4 125 aaPredicted RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 CWC15Q9P013 229 aaKnown RBP17.13■□□□□ 0.33
FAM20B-202ENST00000440702 ACSL6Q9UKU0 697 aa17.13■□□□□ 0.33
FAM20B-202ENST00000440702 TLN1Q9Y490 2541 aaKnown RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 ZFC3H1O60293 1989 aaKnown RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 C9orf172C9J069 976 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 NUDT21O43809 227 aaKnown RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 HOXC4P09017 264 aaPredicted RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 FAM87AP0C7U9 286 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 MYCLP1P12525 358 aaPredicted RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 ATP1A3P13637 1013 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 CCNB1P14635 433 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 PNLIPP16233 465 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 VIPR1P32241 457 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 ETV3P41162 512 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 RENBPP51606 427 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 B4GALNT1Q00973 533 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 BIRC2Q13490 618 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 DPYSQ14117 519 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 PTPRRQ15256 657 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 TSR1Q2NL82 804 aaKnown RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 SMTNL2Q2TAL5 461 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 DOK6Q6PKX4 331 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 SLC30A9Q6PML9 568 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 NRROSQ86YC3 692 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 AOPEPQ8N6M6 819 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 RCBTB1Q8NDN9 531 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 PATE1Q8WXA2 126 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 ZNF653Q96CK0 615 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
FAM20B-202ENST00000440702 NUDT22Q9BRQ3 303 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 TAAR2Q9P1P5 351 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 MYO1AQ9UBC5 1043 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 PCDHGA4Q9Y5G9 962 aa17.12■□□□□ 0.33
FAM20B-202ENST00000440702 A0A0U1RQS6 177 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.11■□□□□ 0.33
FAM20B-202ENST00000440702 TMEM191CA6NGB0 347 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 PDE2AO00408 941 aaPredicted RBP17.11■□□□□ 0.33
FAM20B-202ENST00000440702 B4GAT1O43505 415 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 CCL4P13236 92 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 WT1P19544 449 aaPredicted RBP17.11■□□□□ 0.33
FAM20B-202ENST00000440702 MAXP61244 160 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 CYP4F2P78329 520 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 ILF3Q12906 894 aaKnown RBP eCLIP17.11■□□□□ 0.33
FAM20B-202ENST00000440702 ASIC2Q16515 512 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 RAET1GQ6H3X3 334 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 HSD11B1LQ7Z5J1 315 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 PIM3Q86V86 326 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 PGBD5Q8N414 524 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 GPBAR1Q8TDU6 330 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 TMEM159Q96B96 161 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 PSKH2Q96QS6 385 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 GSDMCQ9BYG8 508 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 NOD2Q9HC29 1040 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 ETNK2Q9NVF9 386 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 CNOT8Q9UFF9 292 aaKnown RBP17.11■□□□□ 0.33
FAM20B-202ENST00000440702 SUFUQ9UMX1 484 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 PCDHB11Q9Y5F2 797 aa17.11■□□□□ 0.33
FAM20B-202ENST00000440702 HECTD1Q9ULT8 2610 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 NPIPB15A6NHN6 443 aaPredicted RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 H3BRJ5 948 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 HTRA2O43464 458 aaPredicted RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 LRCH4O75427 683 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 HEXIM1O94992 359 aaKnown RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 ECEL1O95672 775 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 FTLP02792 175 aaPredicted RBP17.1■□□□□ 0.33
FAM20B-202ENST00000440702 FUCA1P04066 466 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 FGF1P05230 155 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 CEACAM5P06731 702 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 LHCGRP22888 699 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 AMPD1P23109 780 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 POLD2P49005 469 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 KCNC4Q03721 635 aa17.1■□□□□ 0.33
FAM20B-202ENST00000440702 TRAF2Q12933 501 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms