RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 MSH4P40965 878 aaPredicted RBP3.55□□□□□ -1.84
snR55snR55 PRP5P21372 849 aaPredicted RBP3.54□□□□□ -1.84
snR55snR55 NPR1P22211 790 aa3.54□□□□□ -1.84
snR55snR55 ADP1P25371 1049 aa3.54□□□□□ -1.84
snR55snR55 SSY1Q03770 852 aa3.54□□□□□ -1.84
snR55snR55 YLL054CQ12244 843 aa3.54□□□□□ -1.84
snR55snR55 YVC1Q12324 675 aa3.54□□□□□ -1.84
snR55snR55 MEC3Q02574 474 aa3.53□□□□□ -1.84
snR55snR55 TRE1Q08919 783 aa3.53□□□□□ -1.84
snR55snR55 ALG6Q12001 544 aaKnown RBP3.53□□□□□ -1.84
snR55snR55 YDL177CQ12257 170 aa3.53□□□□□ -1.84
snR55snR55 SSA4P22202 642 aaKnown RBP3.52□□□□□ -1.85
snR55snR55 HDA2Q06629 674 aa3.52□□□□□ -1.85
snR55snR55 FUR4P05316 633 aaKnown RBP3.51□□□□□ -1.85
snR55snR55 AIM3P38266 947 aaKnown RBP3.51□□□□□ -1.85
snR55snR55 RSC4Q02206 625 aa3.51□□□□□ -1.85
snR55snR55 MSH6Q03834 1242 aa3.51□□□□□ -1.85
snR55snR55 PRO1P32264 428 aa3.5□□□□□ -1.85
snR55snR55 REI1P38344 393 aaPredicted RBP3.5□□□□□ -1.85
snR55snR55 LEO1P38439 464 aa3.5□□□□□ -1.85
snR55snR55 UTP22P53254 1237 aaPredicted RBP3.5□□□□□ -1.85
snR55snR55 TY1A-LR4P0C2I8 440 aaKnown RBP3.49□□□□□ -1.85
snR55snR55 TY1A-DR6P0CX70 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-ER1P0CX71 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-LR2P0CX72 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-PLP0CX73 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-JR1P0CX74 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-LR3P0CX75 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-ML2P0CX76 440 aa3.49□□□□□ -1.85
snR55snR55 SAP155P43612 1002 aa3.49□□□□□ -1.85
snR55snR55 YGR045CP53229 120 aa3.49□□□□□ -1.85
snR55snR55 TY1A-GR1Q12085 440 aa3.49□□□□□ -1.85
snR55snR55 TY1A-PR3Q6Q5H1 440 aaKnown RBP3.49□□□□□ -1.85
snR55snR55 TY1A-OLQ92392 440 aaKnown RBP3.49□□□□□ -1.85
snR55snR55 NFS1P25374 497 aa3.48□□□□□ -1.85
snR55snR55 SMY2P32909 740 aaKnown RBP3.48□□□□□ -1.85
snR55snR55 PTC7P38797 343 aa3.48□□□□□ -1.85
snR55snR55 ELA1P53861 379 aaPredicted RBP3.48□□□□□ -1.85
snR55snR55 MRPL22P53881 309 aa3.48□□□□□ -1.85
snR55snR55 GIS1Q03833 894 aa3.48□□□□□ -1.85
snR55snR55 RIM8P53179 542 aa3.47□□□□□ -1.85
snR55snR55 ETP1P38748 585 aaKnown RBP3.46□□□□□ -1.86
snR55snR55 GTS1P40956 396 aa3.46□□□□□ -1.86
snR55snR55 UFD2P54860 961 aa3.46□□□□□ -1.86
snR55snR55 MNL2Q12205 849 aa3.46□□□□□ -1.86
snR55snR55 FLP1P03870 423 aa3.45□□□□□ -1.86
snR55snR55 NNK1P36003 928 aa3.45□□□□□ -1.86
snR55snR55 GLO3P38682 493 aaKnown RBP3.45□□□□□ -1.86
snR55snR55 QDR1P40475 563 aa3.45□□□□□ -1.86
snR55snR55 PUS7Q08647 676 aaKnown RBP3.45□□□□□ -1.86
snR55snR55 SOD2P00447 233 aa3.44□□□□□ -1.86
snR55snR55 SAM35P14693 329 aa3.44□□□□□ -1.86
snR55snR55 TOD6P34219 525 aa3.44□□□□□ -1.86
snR55snR55 ARL1P38116 183 aaKnown RBP3.44□□□□□ -1.86
snR55snR55 ECM2P38241 364 aaKnown RBP3.44□□□□□ -1.86
snR55snR55 NUT1P53114 1132 aa3.44□□□□□ -1.86
snR55snR55 YAF9P53930 226 aa3.44□□□□□ -1.86
snR55snR55 YPL277CQ08989 487 aa3.44□□□□□ -1.86
snR55snR55 EXO5P38289 585 aa3.43□□□□□ -1.86
snR55snR55 NEM1P38757 446 aa3.43□□□□□ -1.86
snR55snR55 SLS1P42900 643 aa3.43□□□□□ -1.86
snR55snR55 TPP1Q03796 238 aa3.43□□□□□ -1.86
snR55snR55 BSC2Q05611 235 aa3.43□□□□□ -1.86
snR55snR55 AVO1Q08236 1176 aa3.43□□□□□ -1.86
snR55snR55 YNL011CP53980 444 aa3.42□□□□□ -1.86
snR55snR55 PMT7Q06644 662 aa3.42□□□□□ -1.86
snR55snR55 RPS13P05756 151 aaKnown RBP3.41□□□□□ -1.86
snR55snR55 NMD3P38861 518 aaKnown RBP3.41□□□□□ -1.86
snR55snR55 ATG1P53104 897 aa3.41□□□□□ -1.86
snR55snR55 CDC55Q00362 526 aa3.41□□□□□ -1.86
snR55snR55 CLU1Q03690 1277 aaKnown RBP3.41□□□□□ -1.86
snR55snR55 TRS120Q04183 1289 aa3.41□□□□□ -1.86
snR55snR55 KAR5Q04746 504 aa3.41□□□□□ -1.86
snR55snR55 CTS1P29029 562 aa3.4□□□□□ -1.87
snR55snR55 MCM5P29496 775 aaKnown RBP3.4□□□□□ -1.87
snR55snR55 SUB2Q07478 446 aaKnown RBP3.4□□□□□ -1.87
snR55snR55 ABZ1P37254 787 aaPredicted RBP3.39□□□□□ -1.87
snR55snR55 YHL012WP38709 493 aa3.39□□□□□ -1.87
snR55snR55 ACF4P47129 309 aa3.39□□□□□ -1.87
snR55snR55 MON1P53129 644 aa3.39□□□□□ -1.87
snR55snR55 GSF2Q04697 403 aaKnown RBP3.39□□□□□ -1.87
snR55snR55 YLR257WQ06146 321 aaKnown RBP3.39□□□□□ -1.87
snR55snR55 INP54Q08227 384 aaKnown RBP3.39□□□□□ -1.87
snR55snR55 PRE10P21242 288 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
snR55snR55 SHM2P37291 469 aaKnown RBP3.38□□□□□ -1.87
snR55snR55 YAR028WP39548 234 aa3.38□□□□□ -1.87
snR55snR55 SNO2P53823 222 aa3.38□□□□□ -1.87
snR55snR55 YDR132CQ03900 495 aa3.38□□□□□ -1.87
snR55snR55 RET1P22276 1149 aaKnown RBP3.37□□□□□ -1.87
snR55snR55 YKL077WP36081 392 aa3.37□□□□□ -1.87
snR55snR55 RVS167P39743 482 aaKnown RBP3.37□□□□□ -1.87
snR55snR55 RSA3Q05942 220 aaKnown RBP3.37□□□□□ -1.87
snR55snR55 GPI13Q07830 1017 aa3.37□□□□□ -1.87
snR55snR55 TAD3Q9URQ3 322 aa3.37□□□□□ -1.87
snR55snR55 TRL1P09880 827 aaKnown RBP3.36□□□□□ -1.87
snR55snR55 MDL2P33311 773 aa3.36□□□□□ -1.87
snR55snR55 NOG1Q02892 647 aaKnown RBP3.36□□□□□ -1.87
snR55snR55 UTP5Q04177 643 aaKnown RBP3.36□□□□□ -1.87
snR55snR55 YLR358CO13565 187 aa3.35□□□□□ -1.87
snR55snR55 AIM26P32858 118 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms