RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	RPB10	P22139	70 aa		3.1	□□□□□ -1.91
snR46	snR46	TOD6	P34219	525 aa		3.1	□□□□□ -1.91
snR46	snR46	PEX7	P39108	375 aa		3.1	□□□□□ -1.91
snR46	snR46	FOL2	P51601	243 aa	Known RBP	3.1	□□□□□ -1.91
snR46	snR46	ALT1	P52893	592 aa		3.1	□□□□□ -1.91
snR46	snR46	RIM8	P53179	542 aa		3.1	□□□□□ -1.91
snR46	snR46	MEC3	Q02574	474 aa		3.1	□□□□□ -1.91
snR46	snR46	CWC15	Q03772	175 aa	Known RBP	3.1	□□□□□ -1.91
snR46	snR46	AVO1	Q08236	1176 aa		3.1	□□□□□ -1.91
snR46	snR46	YIG1	Q08956	461 aa		3.1	□□□□□ -1.91
snR46	snR46	APC11	Q12157	165 aa		3.1	□□□□□ -1.91
snR46	snR46	LPX1	Q12405	387 aa	Known RBP	3.1	□□□□□ -1.91
snR46	snR46	FUR4	P05316	633 aa	Known RBP	3.09	□□□□□ -1.91
snR46	snR46	HTS1	P07263	546 aa	Known RBP	3.09	□□□□□ -1.91
snR46	snR46	ETP1	P38748	585 aa	Known RBP	3.09	□□□□□ -1.91
snR46	snR46	ELA1	P53861	379 aa	Predicted RBP	3.09	□□□□□ -1.91
snR46	snR46	NPR1	P22211	790 aa		3.08	□□□□□ -1.92
snR46	snR46	KTR2	P33550	425 aa		3.08	□□□□□ -1.92
snR46	snR46	ABZ1	P37254	787 aa	Predicted RBP	3.08	□□□□□ -1.92
snR46	snR46	UTP22	P53254	1237 aa	Predicted RBP	3.08	□□□□□ -1.92
snR46	snR46	TUB2	P02557	457 aa	Known RBP	3.07	□□□□□ -1.92
snR46	snR46	RPS13	P05756	151 aa	Known RBP	3.07	□□□□□ -1.92
snR46	snR46	SMY2	P32909	740 aa	Known RBP	3.07	□□□□□ -1.92
snR46	snR46	NNK1	P36003	928 aa		3.07	□□□□□ -1.92
snR46	snR46	PNS1	Q12412	539 aa		3.07	□□□□□ -1.92
snR46	snR46	YLR358C	O13565	187 aa		3.06	□□□□□ -1.92
snR46	snR46	SOD2	P00447	233 aa		3.06	□□□□□ -1.92
snR46	snR46	YGR045C	P53229	120 aa		3.06	□□□□□ -1.92
snR46	snR46	YOR352W	Q08816	343 aa		3.06	□□□□□ -1.92
snR46	snR46	YPL277C	Q08989	487 aa		3.06	□□□□□ -1.92
snR46	snR46	YDL177C	Q12257	170 aa		3.06	□□□□□ -1.92
snR46	snR46	LSO1	Q3E827	93 aa		3.06	□□□□□ -1.92
snR46	snR46	SHM2	P37291	469 aa	Known RBP	3.05	□□□□□ -1.92
snR46	snR46	SNO2	P53823	222 aa		3.05	□□□□□ -1.92
snR46	snR46	CTR9	P89105	1077 aa		3.05	□□□□□ -1.92
snR46	snR46	YML083C	Q04526	418 aa		3.05	□□□□□ -1.92
snR46	snR46	CMR1	Q12510	522 aa	Known RBP	3.05	□□□□□ -1.92
snR46	snR46	TAD3	Q9URQ3	322 aa		3.05	□□□□□ -1.92
snR46	snR46	TPP1	Q03796	238 aa		3.04	□□□□□ -1.92
snR46	snR46	RIM11	P38615	370 aa		3.03	□□□□□ -1.92
snR46	snR46	CLU1	Q03690	1277 aa	Known RBP	3.03	□□□□□ -1.92
snR46	snR46	PUS7	Q08647	676 aa	Known RBP	3.03	□□□□□ -1.92
snR46	snR46	SSA4	P22202	642 aa	Known RBP	3.02	□□□□□ -1.93
snR46	snR46	YKL077W	P36081	392 aa		3.02	□□□□□ -1.93
snR46	snR46	COB	P00163	385 aa		3.01	□□□□□ -1.93
snR46	snR46	PRP5	P21372	849 aa	Predicted RBP	3.01	□□□□□ -1.93
snR46	snR46	AIM26	P32858	118 aa		3.01	□□□□□ -1.93
snR46	snR46	DUR3	P33413	735 aa		3.01	□□□□□ -1.93
snR46	snR46	YHL012W	P38709	493 aa		3.01	□□□□□ -1.93
snR46	snR46	NMD3	P38861	518 aa	Known RBP	3.01	□□□□□ -1.93
snR46	snR46	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
snR46	snR46	MCM5	P29496	775 aa	Known RBP	3	□□□□□ -1.93
snR46	snR46	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
snR46	snR46	NOB1	Q08444	459 aa	Known RBP	3	□□□□□ -1.93
snR46	snR46	RET1	P22276	1149 aa	Known RBP	2.99	□□□□□ -1.93
snR46	snR46	MDL2	P33311	773 aa		2.99	□□□□□ -1.93
snR46	snR46	ARL1	P38116	183 aa	Known RBP	2.99	□□□□□ -1.93
snR46	snR46	ATG14	P38270	344 aa		2.99	□□□□□ -1.93
snR46	snR46	GLO3	P38682	493 aa	Known RBP	2.99	□□□□□ -1.93
snR46	snR46	SPT20	P50875	604 aa		2.99	□□□□□ -1.93
snR46	snR46	UFD2	P54860	961 aa		2.99	□□□□□ -1.93
snR46	snR46	RSC4	Q02206	625 aa		2.99	□□□□□ -1.93
snR46	snR46	PMT7	Q06644	662 aa		2.99	□□□□□ -1.93
snR46	snR46	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
snR46	snR46	CTS1	P29029	562 aa		2.98	□□□□□ -1.93
snR46	snR46	BOL3	P39724	118 aa		2.98	□□□□□ -1.93
snR46	snR46	YLR257W	Q06146	321 aa	Known RBP	2.98	□□□□□ -1.93
snR46	snR46	TY1A-LR4	P0C2I8	440 aa	Known RBP	2.97	□□□□□ -1.93
snR46	snR46	TY1A-DR6	P0CX70	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-ER1	P0CX71	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-LR2	P0CX72	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-PL	P0CX73	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-JR1	P0CX74	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-LR3	P0CX75	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-ML2	P0CX76	440 aa		2.97	□□□□□ -1.93
snR46	snR46	YPT53	P36019	220 aa		2.97	□□□□□ -1.93
snR46	snR46	HSE1	P38753	452 aa		2.97	□□□□□ -1.93
snR46	snR46	TAT2	P38967	592 aa		2.97	□□□□□ -1.93
snR46	snR46	YAR028W	P39548	234 aa		2.97	□□□□□ -1.93
snR46	snR46	SLS1	P42900	643 aa		2.97	□□□□□ -1.93
snR46	snR46	DMA2	P53924	522 aa		2.97	□□□□□ -1.93
snR46	snR46	YAF9	P53930	226 aa		2.97	□□□□□ -1.93
snR46	snR46	YNL011C	P53980	444 aa		2.97	□□□□□ -1.93
snR46	snR46	LAP2	Q10740	671 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-GR1	Q12085	440 aa		2.97	□□□□□ -1.93
snR46	snR46	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	2.97	□□□□□ -1.93
snR46	snR46	TY1A-OL	Q92392	440 aa	Known RBP	2.97	□□□□□ -1.93
snR46	snR46	SAM35	P14693	329 aa		2.96	□□□□□ -1.94
snR46	snR46	SHU2	P38957	223 aa		2.96	□□□□□ -1.94
snR46	snR46	RVS167	P39743	482 aa	Known RBP	2.96	□□□□□ -1.94
snR46	snR46	NUT1	P53114	1132 aa		2.96	□□□□□ -1.94
snR46	snR46	BSC2	Q05611	235 aa		2.96	□□□□□ -1.94
snR46	snR46	FLP1	P03870	423 aa		2.95	□□□□□ -1.94
snR46	snR46	SPS1	P08458	490 aa		2.95	□□□□□ -1.94
snR46	snR46	TRM2	P33753	639 aa		2.95	□□□□□ -1.94
snR46	snR46	QDR1	P40475	563 aa		2.95	□□□□□ -1.94
snR46	snR46	MTR4	P47047	1073 aa	Known RBP	2.95	□□□□□ -1.94
snR46	snR46	MON1	P53129	644 aa		2.95	□□□□□ -1.94
snR46	snR46	YNR063W	P53749	607 aa		2.95	□□□□□ -1.94
snR46	snR46	NBA1	Q08229	501 aa	Known RBP	2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms