RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 KIN1P13185 1064 aa0.11□□□□□ -2.39
snR40snR40 LSB5P25369 354 aa0.11□□□□□ -2.39
snR40snR40 FLO10P36170 1169 aa0.11□□□□□ -2.39
snR40snR40 RIX1P38883 763 aaPredicted RBP0.11□□□□□ -2.39
snR40snR40 UTP13Q05946 817 aaKnown RBP0.11□□□□□ -2.39
snR40snR40 SRS2P12954 1174 aa0.1□□□□□ -2.39
snR40snR40 KTR1P27810 393 aaKnown RBP0.1□□□□□ -2.39
snR40snR40 PPZ2P33329 710 aa0.1□□□□□ -2.39
snR40snR40 SDS24P38314 527 aa0.1□□□□□ -2.39
snR40snR40 NEO1P40527 1151 aa0.1□□□□□ -2.39
snR40snR40 MSH4P40965 878 aaPredicted RBP0.1□□□□□ -2.39
snR40snR40 STB4P50104 949 aa0.1□□□□□ -2.39
snR40snR40 YMR074CQ04773 145 aa0.1□□□□□ -2.39
snR40snR40 CBC2Q08920 208 aaKnown RBP RIP-Chip data0.1□□□□□ -2.39not detected
snR40snR40 HRR25P29295 494 aaKnown RBP0.09□□□□□ -2.4
snR40snR40 ISF1P32488 338 aa0.09□□□□□ -2.4
snR40snR40 SPC42P36094 363 aa0.09□□□□□ -2.4
snR40snR40 SOH1P38633 127 aa0.09□□□□□ -2.4
snR40snR40 ALD3P54114 506 aa0.09□□□□□ -2.4
snR40snR40 HAS1Q03532 505 aaKnown RBP0.09□□□□□ -2.4
snR40snR40 ACK1Q07622 623 aaPredicted RBP0.09□□□□□ -2.4
snR40snR40 MSL5Q12186 476 aaKnown RBP RIP-Chip data0.09□□□□□ -2.4not detected
snR40snR40 ILV6P25605 309 aaKnown RBP0.08□□□□□ -2.4
snR40snR40 QDR2P40474 542 aa0.08□□□□□ -2.4
snR40snR40 ENV11P53246 860 aa0.08□□□□□ -2.4
snR40snR40 GND2P53319 492 aa0.08□□□□□ -2.4
snR40snR40 OMS1Q06668 471 aa0.08□□□□□ -2.4
snR40snR40 YOR296WQ08748 1289 aa0.08□□□□□ -2.4
snR40snR40 SUT2Q12286 268 aa0.08□□□□□ -2.4
snR40snR40 SCD5P34758 872 aa0.07□□□□□ -2.4
snR40snR40 AIM9P40053 627 aaKnown RBP0.07□□□□□ -2.4
snR40snR40 RAT1Q02792 1006 aaKnown RBP0.07□□□□□ -2.4
snR40snR40 AIM39Q08223 395 aa0.07□□□□□ -2.4
snR40snR40 CDC6P09119 513 aa0.06□□□□□ -2.4
snR40snR40 DIT2P21595 489 aa0.06□□□□□ -2.4
snR40snR40 YIL165CP40446 119 aa0.06□□□□□ -2.4
snR40snR40 PLB2Q03674 706 aa0.06□□□□□ -2.4
snR40snR40 ROT1Q03691 256 aa0.06□□□□□ -2.4
snR40snR40 RXT3Q07458 294 aa0.06□□□□□ -2.4
snR40snR40 GEP3Q08622 556 aa0.06□□□□□ -2.4
snR40snR40 YLL054CQ12244 843 aa0.06□□□□□ -2.4
snR40snR40 TIF6Q12522 245 aaKnown RBP0.06□□□□□ -2.4
snR40snR40 HVG1P0CE11 249 aa0.05□□□□□ -2.4
snR40snR40 FUS1P11710 512 aa0.05□□□□□ -2.4
snR40snR40 TIM44Q01852 431 aa0.05□□□□□ -2.4
snR40snR40 YLR224WQ05947 369 aa0.05□□□□□ -2.4
snR40snR40 NEW1Q08972 1196 aaKnown RBP0.05□□□□□ -2.4
snR40snR40 SAM35P14693 329 aa0.04□□□□□ -2.4
snR40snR40 BSD2P38356 321 aa0.04□□□□□ -2.4
snR40snR40 ATG3P40344 310 aa0.04□□□□□ -2.4
snR40snR40 YJR124CP47159 448 aa0.04□□□□□ -2.4
snR40snR40 SCW10Q04951 389 aa0.04□□□□□ -2.4
snR40snR40 YOL073CQ08232 322 aa0.04□□□□□ -2.4
snR40snR40 ACF2Q12168 779 aa0.04□□□□□ -2.4
snR40snR40 CYC1P00044 109 aaPredicted RBP0.03□□□□□ -2.4
snR40snR40 EFT1P32324 842 aaKnown RBP0.03□□□□□ -2.4
snR40snR40 SMY2P32909 740 aaKnown RBP0.03□□□□□ -2.4
snR40snR40 NTH2P35172 780 aa0.03□□□□□ -2.4
snR40snR40 GIP1P38229 639 aa0.03□□□□□ -2.4
snR40snR40 HXT5P38695 592 aa0.03□□□□□ -2.4
snR40snR40 UBP7P40453 1071 aa0.03□□□□□ -2.4
snR40snR40 HNT2P49775 206 aa0.03□□□□□ -2.4
snR40snR40 ARO10Q06408 635 aa0.03□□□□□ -2.4
snR40snR40 AIM26P32858 118 aa0.02□□□□□ -2.41
snR40snR40 BNA3P47039 444 aaKnown RBP0.02□□□□□ -2.41
snR40snR40 GCV1P48015 400 aa0.02□□□□□ -2.41
snR40snR40 ACS2P52910 683 aaKnown RBP0.02□□□□□ -2.41
snR40snR40 YPL068CQ02749 293 aa0.02□□□□□ -2.41
snR40snR40 HFD1Q04458 532 aa0.02□□□□□ -2.41
snR40snR40 GPB1Q08886 897 aa0.02□□□□□ -2.41
snR40snR40 MDL2P33311 773 aa0.01□□□□□ -2.41
snR40snR40 YFL034WP43564 1073 aa0.01□□□□□ -2.41
snR40snR40 VPS62P53285 467 aa0.01□□□□□ -2.41
snR40snR40 YAP6Q03935 383 aa0.01□□□□□ -2.41
snR40snR40 YLR040CQ07988 224 aa0.01□□□□□ -2.41
snR40snR40 YOX1P34161 385 aa0□□□□□ -2.41
snR40snR40 YHL012WP38709 493 aa0□□□□□ -2.41
snR40snR40 SDS3P40505 327 aa0□□□□□ -2.41
snR40snR40 FET4P40988 552 aa0□□□□□ -2.41
snR40snR40 MAF1P41910 395 aa0□□□□□ -2.41
snR40snR40 RIM13Q03792 727 aa0□□□□□ -2.41
snR40snR40 PUS7Q08647 676 aaKnown RBP0□□□□□ -2.41
snR40snR40 CYT1P07143 309 aa-0.01□□□□□ -2.41
snR40snR40 PFK1P16861 987 aaKnown RBP-0.01□□□□□ -2.41
snR40snR40 CKB1P43639 278 aa-0.01□□□□□ -2.41
snR40snR40 MUK1Q02866 612 aa-0.01□□□□□ -2.41
snR40snR40 YMR206WQ03695 313 aa-0.01□□□□□ -2.41
snR40snR40 MRH1Q12117 320 aaPredicted RBP-0.01□□□□□ -2.41
snR40snR40 SPS1P08458 490 aa-0.02□□□□□ -2.41
snR40snR40 GFA1P14742 717 aaKnown RBP-0.02□□□□□ -2.41
snR40snR40 PTP1P25044 335 aa-0.02□□□□□ -2.41
snR40snR40 ORC2P32833 620 aa-0.02□□□□□ -2.41
snR40snR40 NNK1P36003 928 aa-0.02□□□□□ -2.41
snR40snR40 ISW1P38144 1129 aa-0.02□□□□□ -2.41
snR40snR40 TDP1P38319 544 aa-0.02□□□□□ -2.41
snR40snR40 NET1P47035 1189 aa-0.02□□□□□ -2.41
snR40snR40 TAH11P47112 604 aa-0.02□□□□□ -2.41
snR40snR40 APJ1P53940 528 aa-0.02□□□□□ -2.41
snR40snR40 MRI1Q06489 411 aaKnown RBP-0.02□□□□□ -2.41
snR40snR40 SUL1P38359 859 aa-0.03□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms