RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W PSY2P40164 858 aa1.32□□□□□ -2.2
RDS3YPR094W GTS1P40956 396 aa1.32□□□□□ -2.2
RDS3YPR094W SUT1P53032 299 aaKnown RBP1.32□□□□□ -2.2
RDS3YPR094W CTR9P89105 1077 aa1.32□□□□□ -2.2
RDS3YPR094W PUN1Q06991 263 aa1.32□□□□□ -2.2
RDS3YPR094W YLR358CO13565 187 aa1.31□□□□□ -2.2
RDS3YPR094W COBP00163 385 aa1.31□□□□□ -2.2
RDS3YPR094W HTS1P07263 546 aaKnown RBP1.31□□□□□ -2.2
RDS3YPR094W PRE10P21242 288 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
RDS3YPR094W DUR3P33413 735 aa1.31□□□□□ -2.2
RDS3YPR094W SIS2P36024 562 aa1.31□□□□□ -2.2
RDS3YPR094W RAD55P38953 406 aa1.31□□□□□ -2.2
RDS3YPR094W GCV1P48015 400 aa1.31□□□□□ -2.2
RDS3YPR094W YIG1Q08956 461 aa1.31□□□□□ -2.2
RDS3YPR094W APC11Q12157 165 aa1.31□□□□□ -2.2
RDS3YPR094W RPB10P22139 70 aa1.3□□□□□ -2.2
RDS3YPR094W TTI1P36097 1038 aa1.3□□□□□ -2.2
RDS3YPR094W IRS4P36115 615 aaKnown RBP1.3□□□□□ -2.2
RDS3YPR094W REI1P38344 393 aaPredicted RBP1.3□□□□□ -2.2
RDS3YPR094W MPT5P39016 859 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
RDS3YPR094W YGR045CP53229 120 aa1.3□□□□□ -2.2
RDS3YPR094W ELA1P53861 379 aaPredicted RBP1.3□□□□□ -2.2
RDS3YPR094W MEC3Q02574 474 aa1.3□□□□□ -2.2
RDS3YPR094W PUS9Q12069 462 aa1.3□□□□□ -2.2
RDS3YPR094W YLL054CQ12244 843 aa1.3□□□□□ -2.2
RDS3YPR094W SRS2P12954 1174 aa1.29□□□□□ -2.2
RDS3YPR094W NPR1P22211 790 aa1.29□□□□□ -2.2
RDS3YPR094W SMY2P32909 740 aaKnown RBP1.29□□□□□ -2.2
RDS3YPR094W RIM11P38615 370 aa1.29□□□□□ -2.2
RDS3YPR094W TAT2P38967 592 aa1.29□□□□□ -2.2
RDS3YPR094W UTP22P53254 1237 aaPredicted RBP1.29□□□□□ -2.2
RDS3YPR094W YDR132CQ03900 495 aa1.29□□□□□ -2.2
RDS3YPR094W PUF6Q04373 656 aaKnown RBP1.29□□□□□ -2.2
RDS3YPR094W CMR1Q12510 522 aaKnown RBP1.29□□□□□ -2.2
RDS3YPR094W SAM35P14693 329 aa1.28□□□□□ -2.2
RDS3YPR094W PRP5P21372 849 aaPredicted RBP1.28□□□□□ -2.2
RDS3YPR094W PUP1P25043 261 aa1.28□□□□□ -2.2
RDS3YPR094W NMD3P38861 518 aaKnown RBP1.28□□□□□ -2.2
RDS3YPR094W MSE1P48525 536 aa1.28□□□□□ -2.2
RDS3YPR094W SUN4P53616 420 aa1.28□□□□□ -2.2
RDS3YPR094W SNO2P53823 222 aa1.28□□□□□ -2.2
RDS3YPR094W CWC15Q03772 175 aaKnown RBP1.28□□□□□ -2.2
RDS3YPR094W TPP1Q03796 238 aa1.28□□□□□ -2.2
RDS3YPR094W PUS7Q08647 676 aaKnown RBP1.28□□□□□ -2.2
RDS3YPR094W TY1A-LR4P0C2I8 440 aaKnown RBP1.27□□□□□ -2.21
RDS3YPR094W TY1A-DR6P0CX70 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-ER1P0CX71 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-LR2P0CX72 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-PLP0CX73 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-JR1P0CX74 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-LR3P0CX75 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-ML2P0CX76 440 aa1.27□□□□□ -2.21
RDS3YPR094W CPS1P27614 576 aa1.27□□□□□ -2.21
RDS3YPR094W SMC1P32908 1225 aa1.27□□□□□ -2.21
RDS3YPR094W TRM2P33753 639 aa1.27□□□□□ -2.21
RDS3YPR094W NNK1P36003 928 aa1.27□□□□□ -2.21
RDS3YPR094W SNM1P40993 198 aa1.27□□□□□ -2.21
RDS3YPR094W SPT20P50875 604 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-GR1Q12085 440 aa1.27□□□□□ -2.21
RDS3YPR094W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.27□□□□□ -2.21
RDS3YPR094W TY1A-OLQ92392 440 aaKnown RBP1.27□□□□□ -2.21
RDS3YPR094W RAD53P22216 821 aa1.26□□□□□ -2.21
RDS3YPR094W YHL012WP38709 493 aa1.26□□□□□ -2.21
RDS3YPR094W MEF2P39677 819 aa1.26□□□□□ -2.21
RDS3YPR094W FOL2P51601 243 aaKnown RBP1.26□□□□□ -2.21
RDS3YPR094W CTF4Q01454 927 aa1.26□□□□□ -2.21
RDS3YPR094W PNP1Q05788 311 aa1.26□□□□□ -2.21
RDS3YPR094W AVO1Q08236 1176 aa1.26□□□□□ -2.21
RDS3YPR094W LSO1Q3E827 93 aa1.26□□□□□ -2.21
RDS3YPR094W RRN6P32786 894 aa1.25□□□□□ -2.21
RDS3YPR094W AIM26P32858 118 aa1.25□□□□□ -2.21
RDS3YPR094W CHS7P38843 316 aa1.25□□□□□ -2.21
RDS3YPR094W LAM1P38851 1228 aa1.25□□□□□ -2.21
RDS3YPR094W SLS1P42900 643 aa1.25□□□□□ -2.21
RDS3YPR094W GCN5Q03330 439 aa1.25□□□□□ -2.21
RDS3YPR094W YML083CQ04526 418 aa1.25□□□□□ -2.21
RDS3YPR094W SGD1Q06132 899 aa1.25□□□□□ -2.21
RDS3YPR094W RET1P22276 1149 aaKnown RBP1.24□□□□□ -2.21
RDS3YPR094W HCM1P25364 564 aa1.24□□□□□ -2.21
RDS3YPR094W MDL2P33311 773 aa1.24□□□□□ -2.21
RDS3YPR094W LST4P34239 828 aa1.24□□□□□ -2.21
RDS3YPR094W PHO23P50947 330 aa1.24□□□□□ -2.21
RDS3YPR094W RSC4Q02206 625 aa1.24□□□□□ -2.21
RDS3YPR094W PLB2Q03674 706 aa1.24□□□□□ -2.21
RDS3YPR094W ROT1Q03691 256 aa1.24□□□□□ -2.21
RDS3YPR094W DUS4Q06063 367 aa1.24□□□□□ -2.21
RDS3YPR094W YLR257WQ06146 321 aaKnown RBP1.24□□□□□ -2.21
RDS3YPR094W NTO1Q12311 748 aa1.24□□□□□ -2.21
RDS3YPR094W CYC1P00044 109 aaPredicted RBP1.23□□□□□ -2.21
RDS3YPR094W ARL1P38116 183 aaKnown RBP1.23□□□□□ -2.21
RDS3YPR094W EXO5P38289 585 aa1.23□□□□□ -2.21
RDS3YPR094W NEM1P38757 446 aa1.23□□□□□ -2.21
RDS3YPR094W BOL3P39724 118 aa1.23□□□□□ -2.21
RDS3YPR094W AIM21P40563 679 aa1.23□□□□□ -2.21
RDS3YPR094W SAP155P43612 1002 aa1.23□□□□□ -2.21
RDS3YPR094W YAF9P53930 226 aa1.23□□□□□ -2.21
RDS3YPR094W RCL1Q08096 367 aaPredicted RBP1.23□□□□□ -2.21
RDS3YPR094W FLP1P03870 423 aa1.22□□□□□ -2.21
RDS3YPR094W SPS1P08458 490 aa1.22□□□□□ -2.21
RDS3YPR094W SRO9P25567 434 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms