RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W RPS26AP39938 119 aaKnown RBP1.68□□□□□ -2.14
SEC8YPR055W RPS26BP39939 119 aaKnown RBP1.68□□□□□ -2.14
SEC8YPR055W RSM26P47141 266 aa1.68□□□□□ -2.14
SEC8YPR055W YAF9P53930 226 aa1.68□□□□□ -2.14
SEC8YPR055W NOP8Q08287 484 aaPredicted RBP1.68□□□□□ -2.14
SEC8YPR055W DED1P06634 604 aaKnown RBP1.68□□□□□ -2.14
SEC8YPR055W SPO74P45819 413 aa1.68□□□□□ -2.14
SEC8YPR055W GUP1P53154 560 aa1.68□□□□□ -2.14
SEC8YPR055W ULP1Q02724 621 aa1.68□□□□□ -2.14
SEC8YPR055W YPL034WQ03083 165 aa1.68□□□□□ -2.14
SEC8YPR055W SPO71Q03868 1245 aa1.68□□□□□ -2.14
SEC8YPR055W YCS4Q06156 1176 aa1.68□□□□□ -2.14
SEC8YPR055W SLD2P34252 453 aa1.67□□□□□ -2.14
SEC8YPR055W GPT2P36148 743 aa1.67□□□□□ -2.14
SEC8YPR055W CIC1P38779 376 aaKnown RBP1.67□□□□□ -2.14
SEC8YPR055W SLS1P42900 643 aa1.67□□□□□ -2.14
SEC8YPR055W REC8Q12188 680 aa1.67□□□□□ -2.14
SEC8YPR055W MSH3P25336 1018 aa1.67□□□□□ -2.14
SEC8YPR055W SEC20P28791 383 aa1.67□□□□□ -2.14
SEC8YPR055W SEC8P32855 1065 aa1.67□□□□□ -2.14
SEC8YPR055W YGR130CP53278 816 aa1.67□□□□□ -2.14
SEC8YPR055W DSE4P53753 1117 aa1.67□□□□□ -2.14
SEC8YPR055W ELA1P53861 379 aaPredicted RBP1.67□□□□□ -2.14
SEC8YPR055W OYE2Q03558 400 aaKnown RBP1.67□□□□□ -2.14
SEC8YPR055W MSH6Q03834 1242 aa1.67□□□□□ -2.14
SEC8YPR055W SLP1Q12232 587 aa1.67□□□□□ -2.14
SEC8YPR055W TRP3P00937 484 aa1.67□□□□□ -2.14
SEC8YPR055W GCD6P32501 712 aaKnown RBP1.67□□□□□ -2.14
SEC8YPR055W PEP7P32609 515 aa1.67□□□□□ -2.14
SEC8YPR055W WHI3P34761 661 aaKnown RBP1.67□□□□□ -2.14
SEC8YPR055W REI1P38344 393 aaPredicted RBP1.67□□□□□ -2.14
SEC8YPR055W NCE103P53615 221 aa1.67□□□□□ -2.14
SEC8YPR055W DOT1Q04089 582 aaKnown RBP1.67□□□□□ -2.14
SEC8YPR055W PMT7Q06644 662 aa1.67□□□□□ -2.14
SEC8YPR055W HEM13P11353 328 aaKnown RBP1.66□□□□□ -2.14
SEC8YPR055W RSC6P25632 483 aa1.66□□□□□ -2.14
SEC8YPR055W COQ2P32378 372 aa1.66□□□□□ -2.14
SEC8YPR055W SQT1P35184 431 aa1.66□□□□□ -2.14
SEC8YPR055W EXO5P38289 585 aa1.66□□□□□ -2.14
SEC8YPR055W RVS167P39743 482 aaKnown RBP1.66□□□□□ -2.14
SEC8YPR055W ARI1P53111 347 aaKnown RBP1.66□□□□□ -2.14
SEC8YPR055W EAR1Q03212 550 aa1.66□□□□□ -2.14
SEC8YPR055W OXR1Q08952 273 aa1.66□□□□□ -2.14
SEC8YPR055W NEM1P38757 446 aa1.66□□□□□ -2.14
SEC8YPR055W PIC2P40035 300 aa1.66□□□□□ -2.14
SEC8YPR055W UTP22P53254 1237 aaPredicted RBP1.66□□□□□ -2.14
SEC8YPR055W SDH1Q00711 640 aa1.66□□□□□ -2.14
SEC8YPR055W PUF3Q07807 879 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SEC8YPR055W YLR122CQ12312 125 aa1.66□□□□□ -2.14
SEC8YPR055W HXK1P04806 485 aaKnown RBP1.65□□□□□ -2.14
SEC8YPR055W VPS35P34110 944 aa1.65□□□□□ -2.14
SEC8YPR055W YKR073CP36153 106 aa1.65□□□□□ -2.14
SEC8YPR055W SEA4P38164 1038 aa1.65□□□□□ -2.14
SEC8YPR055W PEX28P38848 579 aa1.65□□□□□ -2.14
SEC8YPR055W XKS1P42826 600 aa1.65□□□□□ -2.14
SEC8YPR055W RRP15Q06511 250 aaPredicted RBP1.65□□□□□ -2.14
SEC8YPR055W YIG1Q08956 461 aa1.65□□□□□ -2.14
SEC8YPR055W PRP5P21372 849 aaPredicted RBP1.65□□□□□ -2.15
SEC8YPR055W SFA1P32771 386 aa1.65□□□□□ -2.15
SEC8YPR055W YKL077WP36081 392 aa1.65□□□□□ -2.15
SEC8YPR055W SAP155P43612 1002 aa1.65□□□□□ -2.15
SEC8YPR055W YGR045CP53229 120 aa1.65□□□□□ -2.15
SEC8YPR055W YOR223WQ12015 292 aa1.65□□□□□ -2.15
SEC8YPR055W CHS2P14180 963 aa1.65□□□□□ -2.15
SEC8YPR055W MGE1P38523 228 aa1.65□□□□□ -2.15
SEC8YPR055W LEM3P42838 414 aa1.65□□□□□ -2.15
SEC8YPR055W FAR11P53917 953 aa1.65□□□□□ -2.15
SEC8YPR055W GIC2Q06648 383 aa1.65□□□□□ -2.15
SEC8YPR055W RAD2P07276 1031 aa1.64□□□□□ -2.15
SEC8YPR055W GCD1P09032 578 aaPredicted RBP1.64□□□□□ -2.15
SEC8YPR055W CYC8P14922 966 aa1.64□□□□□ -2.15
SEC8YPR055W PGM1P33401 570 aaKnown RBP1.64□□□□□ -2.15
SEC8YPR055W SAF1P38352 637 aa1.64□□□□□ -2.15
SEC8YPR055W MSH4P40965 878 aaPredicted RBP1.64□□□□□ -2.15
SEC8YPR055W MEC3Q02574 474 aa1.64□□□□□ -2.15
SEC8YPR055W YPL109CQ02981 657 aa1.64□□□□□ -2.15
SEC8YPR055W UTP5Q04177 643 aaKnown RBP1.64□□□□□ -2.15
SEC8YPR055W MRL1Q06815 381 aa1.64□□□□□ -2.15
SEC8YPR055W AVO1Q08236 1176 aa1.64□□□□□ -2.15
SEC8YPR055W CYC7P00045 113 aa1.64□□□□□ -2.15
SEC8YPR055W HEM3P28789 327 aa1.64□□□□□ -2.15
SEC8YPR055W OMA1P36163 345 aa1.64□□□□□ -2.15
SEC8YPR055W TOS1P38288 455 aa1.64□□□□□ -2.15
SEC8YPR055W YGL140CP53120 1219 aa1.64□□□□□ -2.15
SEC8YPR055W ADI1Q03677 179 aa1.64□□□□□ -2.15
SEC8YPR055W PRE9P23638 258 aaKnown RBP1.63□□□□□ -2.15
SEC8YPR055W LIP5P32875 414 aa1.63□□□□□ -2.15
SEC8YPR055W MAC1P35192 417 aa1.63□□□□□ -2.15
SEC8YPR055W KAE1P36132 386 aa1.63□□□□□ -2.15
SEC8YPR055W GPB2P39717 880 aa1.63□□□□□ -2.15
SEC8YPR055W GCV1P48015 400 aa1.63□□□□□ -2.15
SEC8YPR055W YGR122WP53272 402 aa1.63□□□□□ -2.15
SEC8YPR055W RAT1Q02792 1006 aaKnown RBP1.63□□□□□ -2.15
SEC8YPR055W ROD1Q02805 837 aa1.63□□□□□ -2.15
SEC8YPR055W GCR1P07261 785 aa1.63□□□□□ -2.15
SEC8YPR055W RPS4AP0CX35 261 aaKnown RBP1.63□□□□□ -2.15
SEC8YPR055W RPS4BP0CX36 261 aaKnown RBP1.63□□□□□ -2.15
SEC8YPR055W NFS1P25374 497 aa1.63□□□□□ -2.15
SEC8YPR055W MRPS18P42847 217 aa1.63□□□□□ -2.15
SEC8YPR055W HDA2Q06629 674 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms