RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	CLF1	Q12309	687 aa	Predicted RBP	11.98	□□□□□ -0.49
HHO1	YPL127C	RXT2	P38255	430 aa		11.97	□□□□□ -0.49
HHO1	YPL127C	NPR3	P38742	1146 aa		11.97	□□□□□ -0.49
HHO1	YPL127C	PES4	P39684	611 aa		11.97	□□□□□ -0.49
HHO1	YPL127C	VPS8	P39702	1274 aa		11.97	□□□□□ -0.49
HHO1	YPL127C	YPT11	P48559	417 aa		11.97	□□□□□ -0.49
HHO1	YPL127C	DCS2	Q12123	353 aa		11.97	□□□□□ -0.49
HHO1	YPL127C	MSM1	P22438	575 aa		11.96	□□□□□ -0.49
HHO1	YPL127C	PRE8	P23639	250 aa		11.96	□□□□□ -0.49
HHO1	YPL127C	AAD16	Q02895	342 aa		11.96	□□□□□ -0.49
HHO1	YPL127C	CEX1	Q12453	761 aa		11.96	□□□□□ -0.49
HHO1	YPL127C	YOR111W	Q99210	232 aa		11.96	□□□□□ -0.49
HHO1	YPL127C	TOP1	P04786	769 aa		11.95	□□□□□ -0.5
HHO1	YPL127C	HXK1	P04806	485 aa	Known RBP	11.95	□□□□□ -0.5
HHO1	YPL127C	CDC6	P09119	513 aa		11.95	□□□□□ -0.5
HHO1	YPL127C	PRO3	P32263	286 aa	Known RBP	11.95	□□□□□ -0.5
HHO1	YPL127C	CSM2	P40465	213 aa		11.95	□□□□□ -0.5
HHO1	YPL127C	PCI8	P40512	444 aa		11.95	□□□□□ -0.5
HHO1	YPL127C	TRS33	Q99394	268 aa		11.95	□□□□□ -0.5
HHO1	YPL127C	FLO11	P08640	1367 aa		11.94	□□□□□ -0.5
HHO1	YPL127C	RPL22A	P05749	121 aa	Known RBP	11.94	□□□□□ -0.5
HHO1	YPL127C	GPA1	P08539	472 aa		11.94	□□□□□ -0.5
HHO1	YPL127C	SRM1	P21827	482 aa		11.94	□□□□□ -0.5
HHO1	YPL127C	RPL8B	P29453	256 aa	Known RBP	11.94	□□□□□ -0.5
HHO1	YPL127C	YKT6	P36015	200 aa	Known RBP	11.94	□□□□□ -0.5
HHO1	YPL127C	TOM71	P38825	639 aa	Known RBP	11.94	□□□□□ -0.5
HHO1	YPL127C	ATG20	Q07528	640 aa		11.94	□□□□□ -0.5
HHO1	YPL127C	GET3	Q12154	354 aa	Known RBP	11.94	□□□□□ -0.5
HHO1	YPL127C	RGP1	P16664	663 aa		11.93	□□□□□ -0.5
HHO1	YPL127C	YDR341C	Q05506	607 aa	Known RBP	11.93	□□□□□ -0.5
HHO1	YPL127C	SKG3	Q06315	1026 aa		11.93	□□□□□ -0.5
HHO1	YPL127C	MET6	P05694	767 aa	Known RBP	11.92	□□□□□ -0.5
HHO1	YPL127C	VPS1	P21576	704 aa	Known RBP	11.92	□□□□□ -0.5
HHO1	YPL127C	MCM3	P24279	971 aa	Known RBP	11.92	□□□□□ -0.5
HHO1	YPL127C	MIC60	P36112	540 aa		11.92	□□□□□ -0.5
HHO1	YPL127C	YER130C	P39959	443 aa		11.92	□□□□□ -0.5
HHO1	YPL127C	MTC3	P53077	123 aa		11.92	□□□□□ -0.5
HHO1	YPL127C	CUE3	P53137	624 aa	Known RBP	11.92	□□□□□ -0.5
HHO1	YPL127C	FOL1	P53848	824 aa		11.92	□□□□□ -0.5
HHO1	YPL127C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.92	□□□□□ -0.5	not detected
HHO1	YPL127C	NBL1	Q3E7Y6	73 aa		11.92	□□□□□ -0.5
HHO1	YPL127C	KIN1	P13185	1064 aa		11.91	□□□□□ -0.5
HHO1	YPL127C	MPE1	P35728	441 aa	Known RBP	11.91	□□□□□ -0.5
HHO1	YPL127C	MRPL10	P36520	322 aa		11.91	□□□□□ -0.5
HHO1	YPL127C	UTP7	P40055	554 aa	Known RBP	11.91	□□□□□ -0.5
HHO1	YPL127C	NAF1	P53919	492 aa	Known RBP	11.91	□□□□□ -0.5
HHO1	YPL127C	SGD1	Q06132	899 aa		11.91	□□□□□ -0.5
HHO1	YPL127C	DSE3	Q08729	430 aa		11.91	□□□□□ -0.5
HHO1	YPL127C	ATE1	P16639	503 aa		11.9	□□□□□ -0.5
HHO1	YPL127C	EBP2	P36049	427 aa	Known RBP	11.9	□□□□□ -0.5
HHO1	YPL127C	RRM3	P38766	723 aa		11.9	□□□□□ -0.5
HHO1	YPL127C	YGL138C	P53122	345 aa		11.9	□□□□□ -0.5
HHO1	YPL127C	MDM1	Q01846	1127 aa		11.9	□□□□□ -0.5
HHO1	YPL127C	SEN54	Q02825	467 aa	Predicted RBP	11.9	□□□□□ -0.5
HHO1	YPL127C	CSC1	Q06538	782 aa		11.9	□□□□□ -0.5
HHO1	YPL127C	NUC1	P08466	329 aa		11.89	□□□□□ -0.51
HHO1	YPL127C	URA1	P28272	314 aa	Predicted RBP	11.89	□□□□□ -0.51
HHO1	YPL127C	CCT3	P39077	534 aa	Known RBP	11.89	□□□□□ -0.51
HHO1	YPL127C	FPK1	P53739	893 aa		11.89	□□□□□ -0.51
HHO1	YPL127C	RTC4	P53850	401 aa		11.89	□□□□□ -0.51
HHO1	YPL127C	VPS30	Q02948	557 aa		11.89	□□□□□ -0.51
HHO1	YPL127C	YDL124W	Q07551	312 aa	Known RBP	11.89	□□□□□ -0.51
HHO1	YPL127C	ADP1	P25371	1049 aa		11.88	□□□□□ -0.51
HHO1	YPL127C	BMH1	P29311	267 aa	Known RBP	11.88	□□□□□ -0.51
HHO1	YPL127C	MCM4	P30665	933 aa	Known RBP	11.88	□□□□□ -0.51
HHO1	YPL127C	GLC3	P32775	704 aa		11.88	□□□□□ -0.51
HHO1	YPL127C	TIP41	Q12199	356 aa		11.88	□□□□□ -0.51
HHO1	YPL127C	TUS1	Q06412	1307 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	CIT1	P00890	479 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	SRP54	P20424	541 aa	Known RBP	11.87	□□□□□ -0.51
HHO1	YPL127C	ACE2	P21192	770 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	GSY2	P27472	705 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	CHS3	P29465	1165 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	YBL028C	P38202	106 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	CST26	P38226	397 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	SNU71	P53207	620 aa	Known RBP	11.87	□□□□□ -0.51
HHO1	YPL127C	TRM44	Q02648	567 aa	Known RBP	11.87	□□□□□ -0.51
HHO1	YPL127C	EIS1	Q05050	843 aa	Known RBP	11.87	□□□□□ -0.51
HHO1	YPL127C	YOR296W	Q08748	1289 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	PTC5	Q12511	572 aa		11.87	□□□□□ -0.51
HHO1	YPL127C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.86	□□□□□ -0.51	not detected
HHO1	YPL127C	ALG1	P16661	449 aa		11.86	□□□□□ -0.51
HHO1	YPL127C	TFG2	P41896	400 aa	Predicted RBP	11.86	□□□□□ -0.51
HHO1	YPL127C	MMR1	Q06324	491 aa		11.86	□□□□□ -0.51
HHO1	YPL127C	PMA1	P05030	918 aa	Known RBP	11.85	□□□□□ -0.51
HHO1	YPL127C	MAK11	P20484	414 aa	Known RBP	11.85	□□□□□ -0.51
HHO1	YPL127C	RAD53	P22216	821 aa		11.85	□□□□□ -0.51
HHO1	YPL127C	SEC20	P28791	383 aa		11.85	□□□□□ -0.51
HHO1	YPL127C	MCM2	P29469	868 aa		11.85	□□□□□ -0.51
HHO1	YPL127C	YGR117C	P53270	476 aa		11.85	□□□□□ -0.51
HHO1	YPL127C	RET3	P53600	189 aa		11.85	□□□□□ -0.51
HHO1	YPL127C	SSL2	Q00578	843 aa		11.85	□□□□□ -0.51
HHO1	YPL127C	VMS1	Q04311	632 aa	Known RBP	11.85	□□□□□ -0.51
HHO1	YPL127C	VPS45	P38932	577 aa		11.84	□□□□□ -0.51
HHO1	YPL127C	DAK2	P43550	591 aa		11.84	□□□□□ -0.51
HHO1	YPL127C	GIS4	Q04233	774 aa		11.84	□□□□□ -0.51
HHO1	YPL127C	GSC2	P40989	1895 aa		11.84	□□□□□ -0.51
HHO1	YPL127C	THR4	P16120	514 aa	Known RBP	11.83	□□□□□ -0.52
HHO1	YPL127C	SRP40	P32583	406 aa	Predicted RBP	11.83	□□□□□ -0.52
HHO1	YPL127C	STV1	P37296	890 aa		11.83	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms