RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	MYO3	P36006	1272 aa		12.42	□□□□□ -0.42
PEX25	YPL112C	BRN1	P38170	754 aa		12.42	□□□□□ -0.42
PEX25	YPL112C	PSF2	P40359	213 aa		12.41	□□□□□ -0.42
PEX25	YPL112C	VMA2	P16140	517 aa	Known RBP	12.4	□□□□□ -0.42
PEX25	YPL112C	EUG1	P32474	517 aa		12.4	□□□□□ -0.42
PEX25	YPL112C	UBP9	P39967	754 aa		12.4	□□□□□ -0.42
PEX25	YPL112C	SOL4	P53315	255 aa		12.4	□□□□□ -0.42
PEX25	YPL112C	VPS30	Q02948	557 aa		12.4	□□□□□ -0.42
PEX25	YPL112C	SPN1	Q06505	410 aa	Predicted RBP	12.4	□□□□□ -0.42
PEX25	YPL112C	PIB1	Q06651	286 aa		12.4	□□□□□ -0.42
PEX25	YPL112C	TPM1	P17536	199 aa	Known RBP	12.39	□□□□□ -0.43
PEX25	YPL112C	PAH1	P32567	862 aa		12.39	□□□□□ -0.43
PEX25	YPL112C	CRG1	P38892	291 aa	RIP-Chip data	12.39	□□□□□ -0.43	not detected
PEX25	YPL112C	HDA1	P53973	706 aa		12.39	□□□□□ -0.43
PEX25	YPL112C	DIT2	P21595	489 aa		12.38	□□□□□ -0.43
PEX25	YPL112C	PKC1	P24583	1151 aa		12.38	□□□□□ -0.43
PEX25	YPL112C	IMP2'	P32351	346 aa		12.38	□□□□□ -0.43
PEX25	YPL112C	RER2	P35196	286 aa		12.38	□□□□□ -0.43
PEX25	YPL112C	PGA3	Q12746	312 aa	Known RBP	12.38	□□□□□ -0.43
PEX25	YPL112C	CIC1	P38779	376 aa	Known RBP	12.37	□□□□□ -0.43
PEX25	YPL112C	PES4	P39684	611 aa		12.37	□□□□□ -0.43
PEX25	YPL112C	PTK2	P47116	818 aa	Known RBP	12.37	□□□□□ -0.43
PEX25	YPL112C	HXT17	P53631	564 aa		12.37	□□□□□ -0.43
PEX25	YPL112C	FOL1	P53848	824 aa		12.37	□□□□□ -0.43
PEX25	YPL112C	GCR2	Q01722	534 aa		12.37	□□□□□ -0.43
PEX25	YPL112C	ULP1	Q02724	621 aa		12.37	□□□□□ -0.43
PEX25	YPL112C	RAD18	P10862	487 aa		12.36	□□□□□ -0.43
PEX25	YPL112C	RPL8B	P29453	256 aa	Known RBP	12.36	□□□□□ -0.43
PEX25	YPL112C	GPB2	P39717	880 aa		12.36	□□□□□ -0.43
PEX25	YPL112C	YKR018C	P36114	725 aa		12.35	□□□□□ -0.43
PEX25	YPL112C	PHO88	P38264	188 aa	Predicted RBP	12.35	□□□□□ -0.43
PEX25	YPL112C	VPS45	P38932	577 aa		12.35	□□□□□ -0.43
PEX25	YPL112C	RPT6	Q01939	405 aa	Known RBP	12.35	□□□□□ -0.43
PEX25	YPL112C	NUC1	P08466	329 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	PEP3	P27801	918 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	HXT13	P39924	564 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	CSM2	P40465	213 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	YAF9	P53930	226 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	ALD6	P54115	500 aa	Known RBP	12.34	□□□□□ -0.43
PEX25	YPL112C	TFC6	Q06339	672 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	ECM29	P38737	1868 aa		12.34	□□□□□ -0.43
PEX25	YPL112C	SAM1	P10659	382 aa	Known RBP	12.33	□□□□□ -0.44
PEX25	YPL112C	MAK31	P23059	88 aa		12.33	□□□□□ -0.44
PEX25	YPL112C	UTR4	P32626	227 aa		12.33	□□□□□ -0.44
PEX25	YPL112C	DLD1	P32891	587 aa		12.33	□□□□□ -0.44
PEX25	YPL112C	MAC1	P35192	417 aa		12.33	□□□□□ -0.44
PEX25	YPL112C	DUS4	Q06063	367 aa		12.33	□□□□□ -0.44
PEX25	YPL112C	ESF1	Q06344	628 aa	Known RBP	12.33	□□□□□ -0.44
PEX25	YPL112C	ICL2	Q12031	575 aa		12.33	□□□□□ -0.44
PEX25	YPL112C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	12.33	□□□□□ -0.44	not detected
PEX25	YPL112C	MYO5	Q04439	1219 aa	Known RBP	12.32	□□□□□ -0.44
PEX25	YPL112C	EST2	Q06163	884 aa		12.32	□□□□□ -0.44
PEX25	YPL112C	SUE1	Q06524	206 aa		12.32	□□□□□ -0.44
PEX25	YPL112C	MET7	Q08645	548 aa		12.32	□□□□□ -0.44
PEX25	YPL112C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	12.31	□□□□□ -0.44	not detected
PEX25	YPL112C	MXR1	P40029	184 aa		12.31	□□□□□ -0.44
PEX25	YPL112C	VPS62	P53285	467 aa		12.31	□□□□□ -0.44
PEX25	YPL112C	UTP4	Q06679	776 aa	Known RBP	12.31	□□□□□ -0.44
PEX25	YPL112C	CLF1	Q12309	687 aa	Predicted RBP	12.31	□□□□□ -0.44
PEX25	YPL112C	CDC19	P00549	500 aa	Known RBP	12.3	□□□□□ -0.44
PEX25	YPL112C	SRP40	P32583	406 aa	Predicted RBP	12.3	□□□□□ -0.44
PEX25	YPL112C	YGR125W	P53273	1036 aa		12.3	□□□□□ -0.44
PEX25	YPL112C	TMA64	Q04600	565 aa	Known RBP	12.3	□□□□□ -0.44
PEX25	YPL112C	MYO1	P08964	1928 aa		12.29	□□□□□ -0.44
PEX25	YPL112C	SRP54	P20424	541 aa	Known RBP	12.29	□□□□□ -0.44
PEX25	YPL112C	TGL1	P34163	548 aa		12.29	□□□□□ -0.44
PEX25	YPL112C	SHP1	P34223	423 aa		12.29	□□□□□ -0.44
PEX25	YPL112C	ALG2	P43636	503 aa		12.29	□□□□□ -0.44
PEX25	YPL112C	BUL2	Q03758	920 aa	Known RBP	12.29	□□□□□ -0.44
PEX25	YPL112C	CSC1	Q06538	782 aa		12.29	□□□□□ -0.44
PEX25	YPL112C	YOR131C	Q12486	218 aa		12.29	□□□□□ -0.44
PEX25	YPL112C	RGT1	P32862	1170 aa		12.28	□□□□□ -0.44
PEX25	YPL112C	KRI1	P42846	591 aa	Known RBP	12.28	□□□□□ -0.44
PEX25	YPL112C	LSB1	P53281	241 aa		12.28	□□□□□ -0.44
PEX25	YPL112C	BRE5	P53741	515 aa	Known RBP	12.28	□□□□□ -0.44
PEX25	YPL112C	YOR111W	Q99210	232 aa		12.28	□□□□□ -0.44
PEX25	YPL112C	SIS2	P36024	562 aa		12.27	□□□□□ -0.45
PEX25	YPL112C	LDH1	P38139	375 aa		12.27	□□□□□ -0.45
PEX25	YPL112C	TOM71	P38825	639 aa	Known RBP	12.27	□□□□□ -0.45
PEX25	YPL112C	DUS3	Q06053	668 aa	Known RBP	12.27	□□□□□ -0.45
PEX25	YPL112C	SPH1	Q06160	661 aa		12.27	□□□□□ -0.45
PEX25	YPL112C	RKM4	Q12504	494 aa		12.27	□□□□□ -0.45
PEX25	YPL112C	NDT80	P38830	627 aa		12.26	□□□□□ -0.45
PEX25	YPL112C	MDM1	Q01846	1127 aa		12.26	□□□□□ -0.45
PEX25	YPL112C	CDC27	P38042	758 aa		12.25	□□□□□ -0.45
PEX25	YPL112C	SPO22	P40511	975 aa		12.25	□□□□□ -0.45
PEX25	YPL112C	SLD5	Q03406	294 aa		12.25	□□□□□ -0.45
PEX25	YPL112C	SUT2	Q12286	268 aa		12.25	□□□□□ -0.45
PEX25	YPL112C	RNR3	P21672	869 aa	Known RBP	12.24	□□□□□ -0.45
PEX25	YPL112C	SEC20	P28791	383 aa		12.24	□□□□□ -0.45
PEX25	YPL112C	MCR1	P36060	302 aa	Known RBP	12.24	□□□□□ -0.45
PEX25	YPL112C	AIM9	P40053	627 aa	Known RBP	12.24	□□□□□ -0.45
PEX25	YPL112C	YJR107W	P47145	328 aa		12.24	□□□□□ -0.45
PEX25	YPL112C	MAL31	P38156	614 aa		12.23	□□□□□ -0.45
PEX25	YPL112C	VPS29	P38759	282 aa		12.23	□□□□□ -0.45
PEX25	YPL112C	VID28	P40547	921 aa		12.23	□□□□□ -0.45
PEX25	YPL112C	FMS1	P50264	508 aa		12.23	□□□□□ -0.45
PEX25	YPL112C	DSE3	Q08729	430 aa		12.23	□□□□□ -0.45
PEX25	YPL112C	AFG3	P39925	761 aa		12.22	□□□□□ -0.45
PEX25	YPL112C	VIP1	Q06685	1146 aa	Known RBP	12.22	□□□□□ -0.45

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms