RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	MSB4	Q12317	492 aa		4.66	□□□□□ -1.66
CHL1	YPL008W	OPI1	P21957	404 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	MCM2	P29469	868 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	NPL4	P33755	580 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	HXT13	P39924	564 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	YEL023C	P39992	682 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	RSM25	P40496	264 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	DOT5	P40553	215 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	SET4	P42948	560 aa		4.65	□□□□□ -1.66
CHL1	YPL008W	FOX2	Q02207	900 aa	Known RBP	4.65	□□□□□ -1.66
CHL1	YPL008W	PHO4	P07270	312 aa	Known RBP	4.65	□□□□□ -1.67
CHL1	YPL008W	YKR075C	P36155	307 aa		4.65	□□□□□ -1.67
CHL1	YPL008W	AAP1	P37898	856 aa	Known RBP	4.65	□□□□□ -1.67
CHL1	YPL008W	TGL3	P40308	642 aa		4.65	□□□□□ -1.67
CHL1	YPL008W	ENP2	P48234	707 aa	Known RBP	4.65	□□□□□ -1.67
CHL1	YPL008W	PEX14	P53112	341 aa		4.65	□□□□□ -1.67
CHL1	YPL008W	APP1	P53933	587 aa		4.65	□□□□□ -1.67
CHL1	YPL008W	VPS16	Q03308	798 aa		4.65	□□□□□ -1.67
CHL1	YPL008W	SVF1	Q05515	481 aa		4.65	□□□□□ -1.67
CHL1	YPL008W	TAF13	P11747	167 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	SLN1	P39928	1220 aa	Predicted RBP	4.64	□□□□□ -1.67
CHL1	YPL008W	DJP1	P40564	432 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	MID1	P41821	548 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	FIG4	P42837	879 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	DAK2	P43550	591 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	NNF1	P47149	201 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	JIP5	Q06214	492 aa	Predicted RBP	4.64	□□□□□ -1.67
CHL1	YPL008W	UBX5	Q06682	500 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	PHO87	P25360	923 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	APL2	P36000	726 aa	Predicted RBP	4.64	□□□□□ -1.67
CHL1	YPL008W	ALD6	P54115	500 aa	Known RBP	4.64	□□□□□ -1.67
CHL1	YPL008W	RIM15	P43565	1770 aa		4.64	□□□□□ -1.67
CHL1	YPL008W	RPL19A	P0CX82	189 aa	Known RBP	4.63	□□□□□ -1.67
CHL1	YPL008W	RPL19B	P0CX83	189 aa	Predicted RBP	4.63	□□□□□ -1.67
CHL1	YPL008W	UBP1	P25037	809 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	MRPS35	P53292	345 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	HXT17	P53631	564 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	ALO1	P54783	526 aa	Known RBP	4.63	□□□□□ -1.67
CHL1	YPL008W	RAT1	Q02792	1006 aa	Known RBP	4.63	□□□□□ -1.67
CHL1	YPL008W	PPM2	Q08282	695 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	ADR1	P07248	1323 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	YGL015C	P33199	130 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	NUG1	P40010	520 aa	Known RBP	4.63	□□□□□ -1.67
CHL1	YPL008W	STR2	P47164	639 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	TPO2	P53283	614 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	ALG12	P53730	551 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	VPS20	Q04272	221 aa		4.63	□□□□□ -1.67
CHL1	YPL008W	YHL017W	P38745	532 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	AIM9	P40053	627 aa	Known RBP	4.62	□□□□□ -1.67
CHL1	YPL008W	ACF4	P47129	309 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	UTP22	P53254	1237 aa	Predicted RBP	4.62	□□□□□ -1.67
CHL1	YPL008W	RPN4	Q03465	531 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	HRQ1	Q05549	1077 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	MPC54	Q08550	464 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	PIN2	Q12057	282 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	YRR1	Q12172	810 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	ELM1	P32801	640 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	SER1	P33330	395 aa	Known RBP	4.62	□□□□□ -1.67
CHL1	YPL008W	MNN4	P36044	1178 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	YDR344C	Q05510	147 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	BUG1	Q12191	341 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	NYV1	Q12255	253 aa		4.62	□□□□□ -1.67
CHL1	YPL008W	HTA1	P04911	132 aa	Known RBP	4.61	□□□□□ -1.67
CHL1	YPL008W	HTA2	P04912	132 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	PBY1	P38254	753 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	NPA3	P47122	385 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	PUS6	P53294	404 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	LCD1	Q04377	747 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	LSO1	Q3E827	93 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	POM152	P39685	1337 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	GLO3	P38682	493 aa	Known RBP	4.61	□□□□□ -1.67
CHL1	YPL008W	YDL206W	Q12424	762 aa		4.61	□□□□□ -1.67
CHL1	YPL008W	UTP10	P42945	1769 aa	Known RBP	4.61	□□□□□ -1.67
CHL1	YPL008W	MIP1	P15801	1254 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	SEC18	P18759	758 aa	Known RBP	4.6	□□□□□ -1.67
CHL1	YPL008W	RPN12	P32496	274 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
CHL1	YPL008W	CIR1	P42940	261 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	YKE2	P52553	114 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	YGL082W	P53155	381 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	APC11	Q12157	165 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	PDR1	P12383	1068 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	RMD1	Q03441	430 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	PSF3	Q12146	194 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	TAH18	Q12181	623 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	RRI2	Q12348	645 aa		4.6	□□□□□ -1.67
CHL1	YPL008W	KTR3	P38130	404 aa	Predicted RBP	4.59	□□□□□ -1.67
CHL1	YPL008W	YMR074C	Q04773	145 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	PEX19	Q07418	342 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	ELG1	Q12050	791 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	CYB2	P00175	591 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	MATALPHA2	P0CY08	210 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	HMLALPHA2	P0CY09	210 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	RPB10	P22139	70 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	PEP3	P27801	918 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	PRX1	P34227	261 aa	Known RBP	4.59	□□□□□ -1.67
CHL1	YPL008W	SOH1	P38633	127 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	RVS167	P39743	482 aa	Known RBP	4.59	□□□□□ -1.67
CHL1	YPL008W	CCT5	P40413	562 aa	Known RBP	4.59	□□□□□ -1.67
CHL1	YPL008W	CWC22	P53333	577 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms