RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B CCP1P00431 361 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B POL5P39985 1022 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B POL32P47110 350 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B YGL140CP53120 1219 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B ITT1Q04638 464 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B FBP1P09201 348 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B KIP2P28743 706 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B BRE2P43132 505 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B MDM12Q92328 271 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B COBP00163 385 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B SPF1P39986 1215 aaKnown RBP2.34□□□□□ -2.03
YOR343W-BYOR343W-B DAK2P43550 591 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B ATP25Q03153 612 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B TY1A-DR2Q03964 440 aaKnown RBP2.34□□□□□ -2.03
YOR343W-BYOR343W-B AI3P03877 415 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B PYC2P32327 1180 aaKnown RBP2.34□□□□□ -2.03
YOR343W-BYOR343W-B RPN11P43588 306 aaKnown RBP2.34□□□□□ -2.03
YOR343W-BYOR343W-B ALT1P52893 592 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B ARI1P53111 347 aaKnown RBP2.34□□□□□ -2.03
YOR343W-BYOR343W-B ECM23Q02710 187 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B VHS3Q08438 674 aa2.34□□□□□ -2.03
YOR343W-BYOR343W-B SSP120P39931 234 aaKnown RBP2.34□□□□□ -2.04
YOR343W-BYOR343W-B CNN1P43618 361 aa2.34□□□□□ -2.04
YOR343W-BYOR343W-B GYP7P48365 746 aa2.34□□□□□ -2.04
YOR343W-BYOR343W-B TPO2P53283 614 aa2.34□□□□□ -2.04
YOR343W-BYOR343W-B DFG5Q05031 458 aa2.34□□□□□ -2.04
YOR343W-BYOR343W-B SPP382Q06411 708 aaPredicted RBP2.34□□□□□ -2.04
YOR343W-BYOR343W-B MAG2Q06436 670 aaKnown RBP2.34□□□□□ -2.04
YOR343W-BYOR343W-B DPB3P27344 201 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B PNT1P38969 423 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B QDR2P40474 542 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B PRK1P40494 810 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B CUS1Q02554 436 aaPredicted RBP2.33□□□□□ -2.04
YOR343W-BYOR343W-B YML083CQ04526 418 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B ATE1P16639 503 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B FUN30P31380 1131 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B SCW11P53189 542 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B ULP1Q02724 621 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B GPM1P00950 247 aaKnown RBP2.33□□□□□ -2.04
YOR343W-BYOR343W-B PDC5P16467 563 aaKnown RBP2.33□□□□□ -2.04
YOR343W-BYOR343W-B PDI1P17967 522 aaKnown RBP2.33□□□□□ -2.04
YOR343W-BYOR343W-B STE11P23561 717 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B KTR4P38131 464 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B UTP22P53254 1237 aaPredicted RBP2.33□□□□□ -2.04
YOR343W-BYOR343W-B SMY2P32909 740 aaKnown RBP2.33□□□□□ -2.04
YOR343W-BYOR343W-B MDL2P33311 773 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B PIC2P40035 300 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B FET4P40988 552 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B ATG11Q12527 1178 aa2.33□□□□□ -2.04
YOR343W-BYOR343W-B TY4B-PA0A0B7P3V8 1104 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B RAD27P26793 382 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B SEC8P32855 1065 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B ADD66P36040 267 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B GLO3P38682 493 aaKnown RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B ADE12P80210 433 aaKnown RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B BDF2Q07442 638 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B TY4A-HQ6Q5P6 413 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B ATP4P05626 244 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B ASH1P34233 588 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B URM1P40554 99 aaPredicted RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B SRC1Q03707 834 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B BIK1P11709 440 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B ROG3P43602 733 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B MSB1P21339 1137 aaKnown RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B UGA3P26370 528 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B PCM1P38628 557 aaKnown RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B IPL1P38991 367 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B ELM1P32801 640 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B YHR020WP38708 688 aaKnown RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B YJR115WP47152 169 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B CCM1P48237 864 aaPredicted RBP2.32□□□□□ -2.04
YOR343W-BYOR343W-B ERP6P53198 216 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B EEB1Q02891 456 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B YLR125WQ12138 136 aa2.32□□□□□ -2.04
YOR343W-BYOR343W-B SNF5P18480 905 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B MSH2P25847 964 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B SKN7P38889 622 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B PHM8P40025 321 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B ACM1Q08981 209 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B CDC12P32468 407 aaKnown RBP2.31□□□□□ -2.04
YOR343W-BYOR343W-B PET112P33893 541 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B ENP2P48234 707 aaKnown RBP2.31□□□□□ -2.04
YOR343W-BYOR343W-B HAS1Q03532 505 aaKnown RBP2.31□□□□□ -2.04
YOR343W-BYOR343W-B UTP5Q04177 643 aaKnown RBP2.31□□□□□ -2.04
YOR343W-BYOR343W-B HLR1Q04429 423 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B FMP25Q08023 583 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B MGS1P40151 587 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B DUG1P43616 481 aaKnown RBP2.31□□□□□ -2.04
YOR343W-BYOR343W-B SAC7P17121 654 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B CDC11P32458 415 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B SPO20Q04359 397 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B ENB1Q08299 606 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B LAP2Q10740 671 aa2.31□□□□□ -2.04
YOR343W-BYOR343W-B PRE10P21242 288 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
YOR343W-BYOR343W-B UGA2P38067 497 aa2.3□□□□□ -2.04
YOR343W-BYOR343W-B CEF1Q03654 590 aaPredicted RBP2.3□□□□□ -2.04
YOR343W-BYOR343W-B TAF8Q03750 510 aa2.3□□□□□ -2.04
YOR343W-BYOR343W-B SPO75Q07798 868 aa2.3□□□□□ -2.04
YOR343W-BYOR343W-B YOR223WQ12015 292 aa2.3□□□□□ -2.04
YOR343W-BYOR343W-B GAL11P19659 1081 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms