RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	JJJ2	P46997	583 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	ENT3	P47160	408 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	CTF18	P49956	741 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	UBX2	Q04228	584 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	HRQ1	Q05549	1077 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	TOS4	Q06266	489 aa		7.04	□□□□□ -1.28
WHI2	YOR043W	FAS2	P19097	1887 aa	Known RBP	7.03	□□□□□ -1.28
WHI2	YOR043W	COQ1	P18900	473 aa		7.03	□□□□□ -1.28
WHI2	YOR043W	MDL2	P33311	773 aa		7.03	□□□□□ -1.28
WHI2	YOR043W	NPL4	P33755	580 aa		7.03	□□□□□ -1.28
WHI2	YOR043W	RRP8	P38961	392 aa	Known RBP	7.03	□□□□□ -1.28
WHI2	YOR043W	GSM1	P42950	618 aa		7.03	□□□□□ -1.28
WHI2	YOR043W	SPN1	Q06505	410 aa	Predicted RBP	7.03	□□□□□ -1.28
WHI2	YOR043W	CTT1	P06115	562 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	ICL1	P28240	557 aa	Predicted RBP	7.02	□□□□□ -1.29
WHI2	YOR043W	GEF1	P37020	779 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	ARL1	P38116	183 aa	Known RBP	7.02	□□□□□ -1.29
WHI2	YOR043W	SLN1	P39928	1220 aa	Predicted RBP	7.02	□□□□□ -1.29
WHI2	YOR043W	YKE2	P52553	114 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	HST1	P53685	503 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	COG8	Q04632	607 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	PSF3	Q12146	194 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	GRX6	Q12438	231 aa		7.02	□□□□□ -1.29
WHI2	YOR043W	CHO2	P05374	869 aa	Known RBP	7.01	□□□□□ -1.29
WHI2	YOR043W	FBP26	P32604	452 aa		7.01	□□□□□ -1.29
WHI2	YOR043W	YKU70	P32807	602 aa		7.01	□□□□□ -1.29
WHI2	YOR043W	RER2	P35196	286 aa		7.01	□□□□□ -1.29
WHI2	YOR043W	SIS2	P36024	562 aa		7.01	□□□□□ -1.29
WHI2	YOR043W	CRG1	P38892	291 aa	RIP-Chip data	7.01	□□□□□ -1.29	not detected
WHI2	YOR043W	KIN4	Q01919	800 aa		7.01	□□□□□ -1.29
WHI2	YOR043W	WRS1	Q12109	432 aa	Known RBP	7.01	□□□□□ -1.29
WHI2	YOR043W	FIG2	P25653	1609 aa		7.01	□□□□□ -1.29
WHI2	YOR043W	MATALPHA2	P0CY08	210 aa		7	□□□□□ -1.29
WHI2	YOR043W	HMLALPHA2	P0CY09	210 aa		7	□□□□□ -1.29
WHI2	YOR043W	GCD11	P32481	527 aa	Known RBP	7	□□□□□ -1.29
WHI2	YOR043W	PRX1	P34227	261 aa	Known RBP	7	□□□□□ -1.29
WHI2	YOR043W	KIC1	P38692	1080 aa		7	□□□□□ -1.29
WHI2	YOR043W	PRP42	Q03776	544 aa	Known RBP	7	□□□□□ -1.29
WHI2	YOR043W	GAS5	Q08193	484 aa		7	□□□□□ -1.29
WHI2	YOR043W	PSK2	Q08217	1101 aa		7	□□□□□ -1.29
WHI2	YOR043W	TFB4	Q12004	338 aa		7	□□□□□ -1.29
WHI2	YOR043W	TY1A-DR4	O74302	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	CPA2	P03965	1118 aa	Known RBP	6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-H	P0C2I4	478 aa	Known RBP	6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-A	P0CX57	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-PR1	P0CX58	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-OR	P0CX59	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-PR2	P0CX60	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-DR5	P0CX65	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-ER2	P0CX66	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-GR3	P0CX67	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-LR1	P0CX68	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-MR2	P0CX69	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	SNF3	P10870	884 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TTI1	P36097	1038 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	YHL017W	P38745	532 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	CIR1	P42940	261 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-JR2	P47099	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	PIP2	P52960	996 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	PEX14	P53112	341 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	UFD2	P54860	961 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	RPS15	Q01855	142 aa	Known RBP	6.99	□□□□□ -1.29
WHI2	YOR043W	ECM23	Q02710	187 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-DR1	Q03856	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-ML1	Q04706	440 aa	Known RBP	6.99	□□□□□ -1.29
WHI2	YOR043W	MRD1	Q06106	887 aa	Known RBP	6.99	□□□□□ -1.29
WHI2	YOR043W	EST2	Q06163	884 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	ELG1	Q12050	791 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-BR	Q12217	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-NL2	Q12470	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TY1A-GR2	Q12485	440 aa		6.99	□□□□□ -1.29
WHI2	YOR043W	TOP1	P04786	769 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	ARG82	P07250	355 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	GAP1	P19145	602 aa	Predicted RBP	6.98	□□□□□ -1.29
WHI2	YOR043W	YER156C	P40093	338 aa	Known RBP	6.98	□□□□□ -1.29
WHI2	YOR043W	BUD6	P41697	788 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	EPL1	P43572	832 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	YDR090C	Q03193	310 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	YDR444W	Q04093	687 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	CSC1	Q06538	782 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	PEX19	Q07418	342 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	HKR1	P41809	1802 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	RTS1	P38903	757 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	HYR1	P40581	163 aa	Known RBP	6.98	□□□□□ -1.29
WHI2	YOR043W	APL6	P46682	809 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	PUS6	P53294	404 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	NSG2	P53898	299 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	YPL150W	Q12152	901 aa		6.98	□□□□□ -1.29
WHI2	YOR043W	HCA4	P20448	770 aa	Known RBP	6.97	□□□□□ -1.29
WHI2	YOR043W	RPS7A	P26786	190 aa	Known RBP	6.97	□□□□□ -1.29
WHI2	YOR043W	ANP1	P32629	500 aa		6.97	□□□□□ -1.29
WHI2	YOR043W	RFC5	P38251	354 aa		6.97	□□□□□ -1.29
WHI2	YOR043W	HDA1	P53973	706 aa		6.97	□□□□□ -1.29
WHI2	YOR043W	YLR407W	Q06070	228 aa		6.97	□□□□□ -1.29
WHI2	YOR043W	YPL260W	Q08977	551 aa		6.97	□□□□□ -1.29
WHI2	YOR043W	APC11	Q12157	165 aa		6.97	□□□□□ -1.29
WHI2	YOR043W	RRG1	Q12167	365 aa	Predicted RBP	6.97	□□□□□ -1.29
WHI2	YOR043W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.96	□□□□□ -1.3	not detected
WHI2	YOR043W	SEC2	P17065	759 aa		6.96	□□□□□ -1.3
WHI2	YOR043W	MBR1	P23493	339 aa		6.96	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms