RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W TRK2P28584 889 aa2.91□□□□□ -1.94
RRP6YOR001W RIM11P38615 370 aa2.91□□□□□ -1.94
RRP6YOR001W RSP5P39940 809 aaKnown RBP2.91□□□□□ -1.94
RRP6YOR001W VTC4P47075 721 aa2.91□□□□□ -1.94
RRP6YOR001W SKP1P52286 194 aa2.91□□□□□ -1.94
RRP6YOR001W MSN5P52918 1224 aa2.91□□□□□ -1.94
RRP6YOR001W ITC1P53125 1264 aa2.91□□□□□ -1.94
RRP6YOR001W TY1A-MR1Q04215 440 aa2.91□□□□□ -1.94
RRP6YOR001W PSH1Q12161 406 aa2.91□□□□□ -1.94
RRP6YOR001W YOR131CQ12486 218 aa2.91□□□□□ -1.94
RRP6YOR001W PHO8P11491 566 aa2.9□□□□□ -1.95
RRP6YOR001W SEC23P15303 768 aaKnown RBP2.9□□□□□ -1.95
RRP6YOR001W DAL1P32375 460 aa2.9□□□□□ -1.95
RRP6YOR001W HPF1Q05164 967 aa2.9□□□□□ -1.95
RRP6YOR001W HDA2Q06629 674 aa2.9□□□□□ -1.95
RRP6YOR001W LEU1P07264 779 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W PRP5P21372 849 aaPredicted RBP2.89□□□□□ -1.95
RRP6YOR001W PDC6P26263 563 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W RDH54P38086 958 aa2.89□□□□□ -1.95
RRP6YOR001W YBR184WP38299 523 aa2.89□□□□□ -1.95
RRP6YOR001W FIR1P40020 876 aa2.89□□□□□ -1.95
RRP6YOR001W YIL165CP40446 119 aa2.89□□□□□ -1.95
RRP6YOR001W XKS1P42826 600 aa2.89□□□□□ -1.95
RRP6YOR001W LYS5P50113 272 aa2.89□□□□□ -1.95
RRP6YOR001W MAL11P53048 616 aa2.89□□□□□ -1.95
RRP6YOR001W KRE33P53914 1056 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W CUS1Q02554 436 aaPredicted RBP2.89□□□□□ -1.95
RRP6YOR001W NOG1Q02892 647 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
RRP6YOR001W FAL1Q12099 399 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W DPH6Q12429 685 aa2.89□□□□□ -1.95
RRP6YOR001W CMR1Q12510 522 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W TRP2P00899 507 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W CAN1P04817 590 aa2.89□□□□□ -1.95
RRP6YOR001W RPL8BP29453 256 aaKnown RBP2.89□□□□□ -1.95
RRP6YOR001W IRE1P32361 1115 aa2.89□□□□□ -1.95
RRP6YOR001W AIM46P38885 310 aa2.89□□□□□ -1.95
RRP6YOR001W CHZ1P40019 153 aaPredicted RBP2.89□□□□□ -1.95
RRP6YOR001W RTA1P53047 317 aa2.89□□□□□ -1.95
RRP6YOR001W YGL140CP53120 1219 aa2.89□□□□□ -1.95
RRP6YOR001W YLR125WQ12138 136 aa2.89□□□□□ -1.95
RRP6YOR001W REC8Q12188 680 aa2.89□□□□□ -1.95
RRP6YOR001W CDC19P00549 500 aaKnown RBP2.88□□□□□ -1.95
RRP6YOR001W HVG1P0CE11 249 aa2.88□□□□□ -1.95
RRP6YOR001W KAR2P16474 682 aaKnown RBP2.88□□□□□ -1.95
RRP6YOR001W BAS1P22035 811 aa2.88□□□□□ -1.95
RRP6YOR001W AGP1P25376 633 aa2.88□□□□□ -1.95
RRP6YOR001W UBP15P50101 1230 aa2.88□□□□□ -1.95
RRP6YOR001W ZDS1P50111 915 aaKnown RBP2.88□□□□□ -1.95
RRP6YOR001W YGL081WP53156 320 aa2.88□□□□□ -1.95
RRP6YOR001W YNR040WP53736 256 aa2.88□□□□□ -1.95
RRP6YOR001W DNM1P54861 757 aa2.88□□□□□ -1.95
RRP6YOR001W MRL1Q06815 381 aa2.88□□□□□ -1.95
RRP6YOR001W FMP25Q08023 583 aa2.88□□□□□ -1.95
RRP6YOR001W YGR161W-CQ3E744 92 aa2.88□□□□□ -1.95
RRP6YOR001W ABD1P32783 436 aaPredicted RBP2.88□□□□□ -1.95
RRP6YOR001W RER2P35196 286 aa2.88□□□□□ -1.95
RRP6YOR001W BET3P36149 193 aa2.88□□□□□ -1.95
RRP6YOR001W CEM1P39525 442 aa2.88□□□□□ -1.95
RRP6YOR001W YMR265CQ03508 461 aaKnown RBP2.88□□□□□ -1.95
RRP6YOR001W TAF8Q03750 510 aa2.88□□□□□ -1.95
RRP6YOR001W SHE9Q04172 456 aa2.88□□□□□ -1.95
RRP6YOR001W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
RRP6YOR001W VBA5P36172 582 aa2.87□□□□□ -1.95
RRP6YOR001W AMN1P38285 549 aaPredicted RBP2.87□□□□□ -1.95
RRP6YOR001W PEX28P38848 579 aa2.87□□□□□ -1.95
RRP6YOR001W RVS167P39743 482 aaKnown RBP2.87□□□□□ -1.95
RRP6YOR001W YEN1P40028 759 aa2.87□□□□□ -1.95
RRP6YOR001W NTG2Q08214 380 aa2.87□□□□□ -1.95
RRP6YOR001W YOL057WQ08225 711 aa2.87□□□□□ -1.95
RRP6YOR001W YPL066WQ12194 479 aa2.87□□□□□ -1.95
RRP6YOR001W NOP14Q99207 810 aaKnown RBP2.87□□□□□ -1.95
RRP6YOR001W RPL8AP17076 256 aaKnown RBP2.87□□□□□ -1.95
RRP6YOR001W NPR1P22211 790 aa2.87□□□□□ -1.95
RRP6YOR001W MSH4P40965 878 aaPredicted RBP2.87□□□□□ -1.95
RRP6YOR001W YGR125WP53273 1036 aa2.87□□□□□ -1.95
RRP6YOR001W YNR029CP53729 429 aaKnown RBP2.87□□□□□ -1.95
RRP6YOR001W SIW14P53965 281 aa2.87□□□□□ -1.95
RRP6YOR001W UTP14Q04500 899 aaKnown RBP2.87□□□□□ -1.95
RRP6YOR001W PMT7Q06644 662 aa2.87□□□□□ -1.95
RRP6YOR001W CIT1P00890 479 aa2.86□□□□□ -1.95
RRP6YOR001W RGP1P16664 663 aa2.86□□□□□ -1.95
RRP6YOR001W MSH3P25336 1018 aa2.86□□□□□ -1.95
RRP6YOR001W MSH2P25847 964 aa2.86□□□□□ -1.95
RRP6YOR001W SBA1P28707 216 aaKnown RBP2.86□□□□□ -1.95
RRP6YOR001W THI4P32318 326 aa2.86□□□□□ -1.95
RRP6YOR001W LYP1P32487 611 aa2.86□□□□□ -1.95
RRP6YOR001W TFA2P36145 328 aa2.86□□□□□ -1.95
RRP6YOR001W EXO5P38289 585 aa2.86□□□□□ -1.95
RRP6YOR001W PAF1P38351 445 aa2.86□□□□□ -1.95
RRP6YOR001W TPM2P40414 161 aa2.86□□□□□ -1.95
RRP6YOR001W IRR1P40541 1150 aa2.86□□□□□ -1.95
RRP6YOR001W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
RRP6YOR001W CUZ1P53899 274 aa2.86□□□□□ -1.95
RRP6YOR001W TMA46Q12000 345 aaKnown RBP2.86□□□□□ -1.95
RRP6YOR001W TY1A-LR4P0C2I8 440 aaKnown RBP2.85□□□□□ -1.95
RRP6YOR001W TY1A-DR6P0CX70 440 aa2.85□□□□□ -1.95
RRP6YOR001W TY1A-ER1P0CX71 440 aa2.85□□□□□ -1.95
RRP6YOR001W TY1A-LR2P0CX72 440 aa2.85□□□□□ -1.95
RRP6YOR001W TY1A-PLP0CX73 440 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms