RNA–Protein interactions for RNA: YOL031C

SIL1, Transcript of Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p, yeast

Gene SIL1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIL1	YOL031C	PRP40	P33203	583 aa	Known RBP	4.65	□□□□□ -1.67
SIL1	YOL031C	IRS4	P36115	615 aa	Known RBP	4.65	□□□□□ -1.67
SIL1	YOL031C	SNF7	P39929	240 aa	Known RBP	4.65	□□□□□ -1.67
SIL1	YOL031C	PPM2	Q08282	695 aa		4.65	□□□□□ -1.67
SIL1	YOL031C	WTM2	Q12206	467 aa		4.65	□□□□□ -1.67
SIL1	YOL031C	VMA3	P25515	160 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	PMC1	P38929	1173 aa	Predicted RBP	4.64	□□□□□ -1.67
SIL1	YOL031C	FAA3	P39002	694 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	RSP5	P39940	809 aa	Known RBP	4.64	□□□□□ -1.67
SIL1	YOL031C	NTA1	P40354	457 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	HLJ1	P48353	224 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	DNM1	P54861	757 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	SPO20	Q04359	397 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	TDA6	Q06466	467 aa		4.64	□□□□□ -1.67
SIL1	YOL031C	BAS1	P22035	811 aa		4.63	□□□□□ -1.67
SIL1	YOL031C	PWP2	P25635	923 aa	Known RBP	4.63	□□□□□ -1.67
SIL1	YOL031C	SQT1	P35184	431 aa		4.63	□□□□□ -1.67
SIL1	YOL031C	MRP8	P35719	219 aa		4.63	□□□□□ -1.67
SIL1	YOL031C	HXT5	P38695	592 aa		4.63	□□□□□ -1.67
SIL1	YOL031C	UTP7	P40055	554 aa	Known RBP	4.63	□□□□□ -1.67
SIL1	YOL031C	ALA1	P40825	983 aa	Known RBP	4.63	□□□□□ -1.67
SIL1	YOL031C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SIL1	YOL031C	ERP6	P53198	216 aa		4.63	□□□□□ -1.67
SIL1	YOL031C	ADI1	Q03677	179 aa		4.63	□□□□□ -1.67
SIL1	YOL031C	ECM16	Q04217	1267 aa	Known RBP	4.63	□□□□□ -1.67
SIL1	YOL031C	UTP4	Q06679	776 aa	Known RBP	4.63	□□□□□ -1.67
SIL1	YOL031C	ARE1	P25628	610 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	SEC6	P32844	805 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	RVS167	P39743	482 aa	Known RBP	4.62	□□□□□ -1.67
SIL1	YOL031C	PSY2	P40164	858 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	YTA6	P40328	754 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	ZDS1	P50111	915 aa	Known RBP	4.62	□□□□□ -1.67
SIL1	YOL031C	ITC1	P53125	1264 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	TPO2	P53283	614 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	TMA64	Q04600	565 aa	Known RBP	4.62	□□□□□ -1.67
SIL1	YOL031C	ADR1	P07248	1323 aa		4.62	□□□□□ -1.67
SIL1	YOL031C	CIT1	P00890	479 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SIL1	YOL031C	ISW1	P38144	1129 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	YBR184W	P38299	523 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	PAF1	P38351	445 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	TAT2	P38967	592 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	IRR1	P40541	1150 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	DAS1	P47005	663 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	RSM26	P47141	266 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	PMT3	P47190	753 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	YNR029C	P53729	429 aa	Known RBP	4.61	□□□□□ -1.67
SIL1	YOL031C	FOL1	P53848	824 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	YPL109C	Q02981	657 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	EAF1	Q06337	982 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	MRL1	Q06815	381 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	NYV1	Q12255	253 aa		4.61	□□□□□ -1.67
SIL1	YOL031C	TMA7	Q3E764	64 aa	Known RBP	4.61	□□□□□ -1.67
SIL1	YOL031C	CDC19	P00549	500 aa	Known RBP	4.6	□□□□□ -1.67
SIL1	YOL031C	FLP1	P03870	423 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	TAF13	P11747	167 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	PRP9	P19736	530 aa	Known RBP	4.6	□□□□□ -1.67
SIL1	YOL031C	MAC1	P35192	417 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	SUM1	P46676	1062 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	NAM8	Q00539	523 aa	Known RBP	4.6	□□□□□ -1.67
SIL1	YOL031C	ULP1	Q02724	621 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	YDL121C	Q07541	149 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	YDL124W	Q07551	312 aa	Known RBP	4.6	□□□□□ -1.67
SIL1	YOL031C	Q0182	Q9ZZW1	134 aa		4.6	□□□□□ -1.67
SIL1	YOL031C	CAN1	P04817	590 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	GCR1	P07261	785 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	AGP1	P25376	633 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	MSH2	P25847	964 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	RPL8B	P29453	256 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	MCM5	P29496	775 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	VPS24	P36095	224 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	PBY1	P38254	753 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	YHR020W	P38708	688 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	SHU2	P38957	223 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	SSN3	P39073	555 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	SBE2	P42223	864 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	YGR237C	P50089	785 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	KRE33	P53914	1056 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	UGO1	Q03327	502 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	SHE9	Q04172	456 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	TY1A-DR3	Q12441	440 aa		4.59	□□□□□ -1.67
SIL1	YOL031C	TIF6	Q12522	245 aa	Known RBP	4.59	□□□□□ -1.67
SIL1	YOL031C	MSN1	P22148	382 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	SBA1	P28707	216 aa	Known RBP	4.58	□□□□□ -1.68
SIL1	YOL031C	MFT1	P33441	392 aa	Known RBP	4.58	□□□□□ -1.68
SIL1	YOL031C	AMN1	P38285	549 aa	Predicted RBP	4.58	□□□□□ -1.68
SIL1	YOL031C	AIM46	P38885	310 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	ERP2	P39704	215 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	QDR2	P40474	542 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	VTC4	P47075	721 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	MON1	P53129	644 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	TOS4	Q06266	489 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	PMT7	Q06644	662 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	SLX4	Q12098	748 aa		4.58	□□□□□ -1.68
SIL1	YOL031C	NUP145	P49687	1317 aa		4.57	□□□□□ -1.68
SIL1	YOL031C	ERR1	P0CX10	437 aa		4.57	□□□□□ -1.68
SIL1	YOL031C	ERR2	P0CX11	437 aa		4.57	□□□□□ -1.68
SIL1	YOL031C	RPL8A	P17076	256 aa	Known RBP	4.57	□□□□□ -1.68
SIL1	YOL031C	TRX2	P22803	104 aa	Known RBP	4.57	□□□□□ -1.68
SIL1	YOL031C	KAP122	P32767	1081 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms