RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	IOC2	Q12072	812 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	PDC1	P06169	563 aa	Known RBP	3.79	□□□□□ -1.8
SKP2	YNL311C	VMA1	P17255	1071 aa	Known RBP	3.79	□□□□□ -1.8
SKP2	YNL311C	VPS53	P47061	822 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	YGR125W	P53273	1036 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	MFB1	Q04922	465 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	DUS4	Q06063	367 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	SWI6	P09959	803 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	LEO1	P38439	464 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	STS1	P38637	319 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	ITC1	P53125	1264 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	DAK1	P54838	584 aa	Known RBP	3.78	□□□□□ -1.8
SKP2	YNL311C	YOL057W	Q08225	711 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	BMT6	Q12291	365 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	SNF3	P10870	884 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	SNA3	P14359	133 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	URK1	P27515	501 aa		3.78	□□□□□ -1.8
SKP2	YNL311C	TIF4631	P39935	952 aa	Known RBP	3.78	□□□□□ -1.8
SKP2	YNL311C	ORC1	P54784	914 aa	Predicted RBP	3.78	□□□□□ -1.8
SKP2	YNL311C	MPH3	P0CE00	602 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	PTC4	P38089	393 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	STB5	P38699	743 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	FMP10	P40098	244 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	IMG2	P25642	146 aa	Predicted RBP	3.77	□□□□□ -1.81
SKP2	YNL311C	RTG1	P32607	177 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	SPO74	P45819	413 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	YGR035C	P53222	116 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	SAM3	Q08986	587 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	PSH1	Q12161	406 aa		3.77	□□□□□ -1.81
SKP2	YNL311C	TEL1	P38110	2787 aa		3.76	□□□□□ -1.81
SKP2	YNL311C	RPP0	P05317	312 aa	Known RBP	3.76	□□□□□ -1.81
SKP2	YNL311C	PPZ1	P26570	692 aa		3.76	□□□□□ -1.81
SKP2	YNL311C	CST26	P38226	397 aa		3.76	□□□□□ -1.81
SKP2	YNL311C	INP52	P50942	1183 aa		3.76	□□□□□ -1.81
SKP2	YNL311C	YML037C	Q03703	340 aa		3.76	□□□□□ -1.81
SKP2	YNL311C	COQ4	O13525	335 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	POX1	P13711	748 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	YUR1	P26725	428 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	SRP40	P32583	406 aa	Predicted RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	SPO71	Q03868	1245 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	EMI2	Q04409	500 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	MMR1	Q06324	491 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	DUR1,2	P32528	1835 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	ECM29	P38737	1868 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	TFG1	P41895	735 aa	Predicted RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	YJL045W	P47052	634 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	SGM1	P47166	707 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	BIO5	P53744	561 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	YNL035C	P53962	389 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	ALD6	P54115	500 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	LCD1	Q04377	747 aa		3.75	□□□□□ -1.81
SKP2	YNL311C	YDL124W	Q07551	312 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	ISA1	Q07821	250 aa	Predicted RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	MSC6	Q08818	692 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	BMS1	Q08965	1183 aa	Known RBP	3.75	□□□□□ -1.81
SKP2	YNL311C	RPS9A	O13516	197 aa	Known RBP	3.74	□□□□□ -1.81
SKP2	YNL311C	BUL2	Q03758	920 aa	Known RBP	3.74	□□□□□ -1.81
SKP2	YNL311C	HCR1	Q05775	265 aa	Known RBP	3.74	□□□□□ -1.81
SKP2	YNL311C	NCR1	Q12200	1170 aa		3.74	□□□□□ -1.81
SKP2	YNL311C	KEX2	P13134	814 aa		3.74	□□□□□ -1.81
SKP2	YNL311C	HCM1	P25364	564 aa		3.74	□□□□□ -1.81
SKP2	YNL311C	ARP1	P38696	384 aa		3.74	□□□□□ -1.81
SKP2	YNL311C	UBP12	P39538	1254 aa		3.74	□□□□□ -1.81
SKP2	YNL311C	YDR306C	Q06640	478 aa		3.74	□□□□□ -1.81
SKP2	YNL311C	SNU66	Q12420	587 aa	Predicted RBP	3.74	□□□□□ -1.81
SKP2	YNL311C	TRP2	P00899	507 aa	Known RBP	3.73	□□□□□ -1.81
SKP2	YNL311C	MBR1	P23493	339 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	CAD1	P24813	409 aa	Known RBP	3.73	□□□□□ -1.81
SKP2	YNL311C	SEC61	P32915	480 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	DUR3	P33413	735 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	YTA12	P40341	825 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	YNL115C	P53925	644 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	YML020W	Q03722	664 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	GYP5	Q12344	894 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	MSD1	P15179	658 aa	Known RBP	3.73	□□□□□ -1.81
SKP2	YNL311C	FUB1	P25659	250 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	RPT3	P33298	428 aa	Known RBP	3.73	□□□□□ -1.81
SKP2	YNL311C	PTK1	P36002	662 aa	Predicted RBP	3.73	□□□□□ -1.81
SKP2	YNL311C	SOL4	P53315	255 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	VPS72	Q03388	795 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
SKP2	YNL311C	PIG1	Q06216	648 aa		3.73	□□□□□ -1.81
SKP2	YNL311C	BET2	P20133	325 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	MCM4	P30665	933 aa	Known RBP	3.72	□□□□□ -1.81
SKP2	YNL311C	SEC8	P32855	1065 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	MDL2	P33311	773 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	SFB3	P38810	929 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	AZR1	P50080	613 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	HEF3	P53978	1044 aa	Known RBP	3.72	□□□□□ -1.81
SKP2	YNL311C	AFT1	P22149	690 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	COQ8	P27697	501 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	UTR4	P32626	227 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	SMY2	P32909	740 aa	Known RBP	3.72	□□□□□ -1.81
SKP2	YNL311C	NUP133	P36161	1157 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	FAA3	P39002	694 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	ALD5	P40047	520 aa	Known RBP	3.72	□□□□□ -1.81
SKP2	YNL311C	PIP2	P52960	996 aa		3.72	□□□□□ -1.81
SKP2	YNL311C	HTA1	P04911	132 aa	Known RBP	3.71	□□□□□ -1.82
SKP2	YNL311C	HTA2	P04912	132 aa		3.71	□□□□□ -1.82
SKP2	YNL311C	MCM3	P24279	971 aa	Known RBP	3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms