RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A PYC2P32327 1180 aaKnown RBP5.6□□□□□ -1.51
YSF3YNL138W-A KNS1P32350 737 aaPredicted RBP5.6□□□□□ -1.51
YSF3YNL138W-A RSC2Q06488 889 aa5.6□□□□□ -1.51
YSF3YNL138W-A YOR1P53049 1477 aa5.59□□□□□ -1.51
YSF3YNL138W-A COBP00163 385 aa5.59□□□□□ -1.51
YSF3YNL138W-A PHO4P07270 312 aaKnown RBP5.59□□□□□ -1.51
YSF3YNL138W-A YHL008CP38750 627 aa5.59□□□□□ -1.51
YSF3YNL138W-A INP54Q08227 384 aaKnown RBP5.59□□□□□ -1.51
YSF3YNL138W-A CHC1P22137 1653 aaKnown RBP5.59□□□□□ -1.52
YSF3YNL138W-A DUR3P33413 735 aa5.58□□□□□ -1.52
YSF3YNL138W-A ALD3P54114 506 aa5.58□□□□□ -1.52
YSF3YNL138W-A NOC3Q07896 663 aaPredicted RBP5.58□□□□□ -1.52
YSF3YNL138W-A SNQ2P32568 1501 aaKnown RBP5.58□□□□□ -1.52
YSF3YNL138W-A POL1P13382 1468 aa5.58□□□□□ -1.52
YSF3YNL138W-A FLP1P03870 423 aa5.57□□□□□ -1.52
YSF3YNL138W-A ATE1P16639 503 aa5.57□□□□□ -1.52
YSF3YNL138W-A ECM2P38241 364 aaKnown RBP5.57□□□□□ -1.52
YSF3YNL138W-A INP51P40559 946 aaKnown RBP5.57□□□□□ -1.52
YSF3YNL138W-A POL32P47110 350 aa5.57□□□□□ -1.52
YSF3YNL138W-A SAM37P50110 327 aa5.57□□□□□ -1.52
YSF3YNL138W-A RGA2Q06407 1009 aa5.57□□□□□ -1.52
YSF3YNL138W-A GDB1Q06625 1536 aa5.57□□□□□ -1.52
YSF3YNL138W-A MYO4P32492 1471 aa5.57□□□□□ -1.52
YSF3YNL138W-A FUS1P11710 512 aa5.56□□□□□ -1.52
YSF3YNL138W-A NAR1P23503 491 aaKnown RBP5.56□□□□□ -1.52
YSF3YNL138W-A TFA2P36145 328 aa5.56□□□□□ -1.52
YSF3YNL138W-A SBE2P42223 864 aaKnown RBP5.56□□□□□ -1.52
YSF3YNL138W-A DAK2P43550 591 aa5.56□□□□□ -1.52
YSF3YNL138W-A PDR12Q02785 1511 aa5.56□□□□□ -1.52
YSF3YNL138W-A IQG1Q12280 1495 aa5.56□□□□□ -1.52
YSF3YNL138W-A AI1P03875 834 aa5.55□□□□□ -1.52
YSF3YNL138W-A PGM2P37012 569 aaKnown RBP5.55□□□□□ -1.52
YSF3YNL138W-A ALG14P38242 237 aa5.55□□□□□ -1.52
YSF3YNL138W-A SOK2P53438 785 aaPredicted RBP5.55□□□□□ -1.52
YSF3YNL138W-A BIO5P53744 561 aaKnown RBP5.55□□□□□ -1.52
YSF3YNL138W-A RRP15Q06511 250 aaPredicted RBP5.55□□□□□ -1.52
YSF3YNL138W-A GLO4Q12320 285 aa5.55□□□□□ -1.52
YSF3YNL138W-A GCD6P32501 712 aaKnown RBP5.54□□□□□ -1.52
YSF3YNL138W-A RPT1P33299 467 aaKnown RBP5.54□□□□□ -1.52
YSF3YNL138W-A VPS35P34110 944 aa5.54□□□□□ -1.52
YSF3YNL138W-A MDJ1P35191 511 aa5.54□□□□□ -1.52
YSF3YNL138W-A MET10P39692 1035 aa5.54□□□□□ -1.52
YSF3YNL138W-A MON1P53129 644 aa5.54□□□□□ -1.52
YSF3YNL138W-A GIS4Q04233 774 aa5.54□□□□□ -1.52
YSF3YNL138W-A TOS4Q06266 489 aa5.54□□□□□ -1.52
YSF3YNL138W-A THI72Q08579 599 aa5.54□□□□□ -1.52
YSF3YNL138W-A MLP2P40457 1679 aa5.53□□□□□ -1.52
YSF3YNL138W-A CIC1P38779 376 aaKnown RBP5.53□□□□□ -1.52
YSF3YNL138W-A YFL066CP43538 392 aa5.53□□□□□ -1.52
YSF3YNL138W-A YJR124CP47159 448 aa5.53□□□□□ -1.52
YSF3YNL138W-A SOG2Q08817 791 aa5.53□□□□□ -1.52
YSF3YNL138W-A AMN1P38285 549 aaPredicted RBP5.52□□□□□ -1.53
YSF3YNL138W-A RIM11P38615 370 aa5.52□□□□□ -1.53
YSF3YNL138W-A BOI2P39969 1040 aa5.52□□□□□ -1.53
YSF3YNL138W-A GIP2P40036 548 aa5.52□□□□□ -1.53
YSF3YNL138W-A TED1P40533 473 aa5.52□□□□□ -1.53
YSF3YNL138W-A LSB6P42951 607 aa5.52□□□□□ -1.53
YSF3YNL138W-A NUT1P53114 1132 aa5.52□□□□□ -1.53
YSF3YNL138W-A YNR014WP53719 212 aa5.52□□□□□ -1.53
YSF3YNL138W-A MSH6Q03834 1242 aa5.52□□□□□ -1.53
YSF3YNL138W-A STU1P38198 1513 aa5.52□□□□□ -1.53
YSF3YNL138W-A YNR065CP53751 1116 aa5.51□□□□□ -1.53
YSF3YNL138W-A DAL4Q04895 635 aa5.51□□□□□ -1.53
YSF3YNL138W-A YCS4Q06156 1176 aa5.51□□□□□ -1.53
YSF3YNL138W-A CMR1Q12510 522 aaKnown RBP5.51□□□□□ -1.53
YSF3YNL138W-A NHA1Q99271 985 aa5.51□□□□□ -1.53
YSF3YNL138W-A HVG1P0CE11 249 aa5.5□□□□□ -1.53
YSF3YNL138W-A NPR1P22211 790 aa5.5□□□□□ -1.53
YSF3YNL138W-A MCM2P29469 868 aa5.5□□□□□ -1.53
YSF3YNL138W-A MET1P36150 593 aa5.5□□□□□ -1.53
YSF3YNL138W-A MGE1P38523 228 aa5.5□□□□□ -1.53
YSF3YNL138W-A NEO1P40527 1151 aa5.5□□□□□ -1.53
YSF3YNL138W-A NSG2P53898 299 aa5.5□□□□□ -1.53
YSF3YNL138W-A UGA4P32837 571 aa5.49□□□□□ -1.53
YSF3YNL138W-A SEC8P32855 1065 aa5.49□□□□□ -1.53
YSF3YNL138W-A PRP40P33203 583 aaKnown RBP5.49□□□□□ -1.53
YSF3YNL138W-A GUP1P53154 560 aa5.49□□□□□ -1.53
YSF3YNL138W-A TDA6Q06466 467 aa5.49□□□□□ -1.53
YSF3YNL138W-A OXR1Q08952 273 aa5.49□□□□□ -1.53
YSF3YNL138W-A ASF1P32447 279 aa5.48□□□□□ -1.53
YSF3YNL138W-A PAN5P38787 379 aa5.48□□□□□ -1.53
YSF3YNL138W-A FAA3P39002 694 aa5.48□□□□□ -1.53
YSF3YNL138W-A SAP155P43612 1002 aa5.48□□□□□ -1.53
YSF3YNL138W-A YJR107WP47145 328 aa5.48□□□□□ -1.53
YSF3YNL138W-A HAS1Q03532 505 aaKnown RBP5.48□□□□□ -1.53
YSF3YNL138W-A PMT7Q06644 662 aa5.48□□□□□ -1.53
YSF3YNL138W-A BUD3P25558 1636 aa5.48□□□□□ -1.53
YSF3YNL138W-A TY4B-PA0A0B7P3V8 1104 aa5.47□□□□□ -1.53
YSF3YNL138W-A PRP5P21372 849 aaPredicted RBP5.47□□□□□ -1.53
YSF3YNL138W-A MCM5P29496 775 aaKnown RBP5.47□□□□□ -1.53
YSF3YNL138W-A RVS167P39743 482 aaKnown RBP5.47□□□□□ -1.53
YSF3YNL138W-A FYV10P40492 516 aa5.47□□□□□ -1.53
YSF3YNL138W-A FET4P40988 552 aa5.47□□□□□ -1.53
YSF3YNL138W-A YAF9P53930 226 aa5.47□□□□□ -1.53
YSF3YNL138W-A OYE2Q03558 400 aaKnown RBP5.47□□□□□ -1.53
YSF3YNL138W-A SLP1Q12232 587 aa5.47□□□□□ -1.53
YSF3YNL138W-A TY4A-HQ6Q5P6 413 aa5.47□□□□□ -1.53
YSF3YNL138W-A HXK1P04806 485 aaKnown RBP5.46□□□□□ -1.54
YSF3YNL138W-A RRM3P38766 723 aa5.46□□□□□ -1.54
YSF3YNL138W-A RPS26AP39938 119 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms