RNA–Protein interactions for RNA: YNL105W

RRT16, Transcript of Dubious open reading frame, yeast

Gene RRT16, Length 429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT16	YNL105W	DUR3	P33413	735 aa		4.68	□□□□□ -1.66
RRT16	YNL105W	GLO3	P38682	493 aa	Known RBP	4.68	□□□□□ -1.66
RRT16	YNL105W	MEC3	Q02574	474 aa		4.68	□□□□□ -1.66
RRT16	YNL105W	QDR1	P40475	563 aa		4.67	□□□□□ -1.66
RRT16	YNL105W	MSH4	P40965	878 aa	Predicted RBP	4.67	□□□□□ -1.66
RRT16	YNL105W	KAR5	Q04746	504 aa		4.67	□□□□□ -1.66
RRT16	YNL105W	REI1	P38344	393 aa	Predicted RBP	4.66	□□□□□ -1.66
RRT16	YNL105W	ALT1	P52893	592 aa		4.66	□□□□□ -1.66
RRT16	YNL105W	UTP22	P53254	1237 aa	Predicted RBP	4.66	□□□□□ -1.66
RRT16	YNL105W	MSH6	Q03834	1242 aa		4.66	□□□□□ -1.66
RRT16	YNL105W	ALG6	Q12001	544 aa	Known RBP	4.66	□□□□□ -1.66
RRT16	YNL105W	ADP1	P25371	1049 aa		4.65	□□□□□ -1.67
RRT16	YNL105W	YCR015C	P25616	317 aa		4.65	□□□□□ -1.67
RRT16	YNL105W	CDA2	Q06703	312 aa		4.65	□□□□□ -1.67
RRT16	YNL105W	TSA1	P34760	196 aa	Known RBP	4.64	□□□□□ -1.67
RRT16	YNL105W	YKL222C	P35995	705 aa		4.64	□□□□□ -1.67
RRT16	YNL105W	YNL011C	P53980	444 aa		4.64	□□□□□ -1.67
RRT16	YNL105W	EAR1	Q03212	550 aa		4.64	□□□□□ -1.67
RRT16	YNL105W	TRE1	Q08919	783 aa		4.64	□□□□□ -1.67
RRT16	YNL105W	SAP155	P43612	1002 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	ATG1	P53104	897 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	ORC3	P54790	616 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	SSY1	Q03770	852 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	BSC2	Q05611	235 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	ESC8	Q08119	714 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	YVC1	Q12324	675 aa		4.63	□□□□□ -1.67
RRT16	YNL105W	FLP1	P03870	423 aa		4.62	□□□□□ -1.67
RRT16	YNL105W	NFS1	P25374	497 aa		4.62	□□□□□ -1.67
RRT16	YNL105W	ACF4	P47129	309 aa		4.62	□□□□□ -1.67
RRT16	YNL105W	RPL34A	P87262	121 aa	Predicted RBP	4.62	□□□□□ -1.67
RRT16	YNL105W	TRS120	Q04183	1289 aa		4.62	□□□□□ -1.67
RRT16	YNL105W	SMY2	P32909	740 aa	Known RBP	4.61	□□□□□ -1.67
RRT16	YNL105W	PEX7	P39108	375 aa		4.61	□□□□□ -1.67
RRT16	YNL105W	YGR045C	P53229	120 aa		4.61	□□□□□ -1.67
RRT16	YNL105W	ELA1	P53861	379 aa	Predicted RBP	4.61	□□□□□ -1.67
RRT16	YNL105W	CDC55	Q00362	526 aa		4.61	□□□□□ -1.67
RRT16	YNL105W	PMT7	Q06644	662 aa		4.61	□□□□□ -1.67
RRT16	YNL105W	MNL2	Q12205	849 aa		4.61	□□□□□ -1.67
RRT16	YNL105W	PRO1	P32264	428 aa		4.6	□□□□□ -1.67
RRT16	YNL105W	CDC3	P32457	520 aa	Known RBP	4.6	□□□□□ -1.67
RRT16	YNL105W	ARL1	P38116	183 aa	Known RBP	4.6	□□□□□ -1.67
RRT16	YNL105W	NUT1	P53114	1132 aa		4.6	□□□□□ -1.67
RRT16	YNL105W	YAF9	P53930	226 aa		4.6	□□□□□ -1.67
RRT16	YNL105W	AVO1	Q08236	1176 aa		4.6	□□□□□ -1.67
RRT16	YNL105W	LPX1	Q12405	387 aa	Known RBP	4.6	□□□□□ -1.67
RRT16	YNL105W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-DR6	P0CX70	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-ER1	P0CX71	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-LR2	P0CX72	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-PL	P0CX73	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-JR1	P0CX74	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-LR3	P0CX75	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-ML2	P0CX76	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	THI80	P35202	319 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	NNK1	P36003	928 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TAF1	P46677	1066 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-GR1	Q12085	440 aa		4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.59	□□□□□ -1.67
RRT16	YNL105W	TY1A-OL	Q92392	440 aa	Known RBP	4.59	□□□□□ -1.67
RRT16	YNL105W	MCM5	P29496	775 aa	Known RBP	4.58	□□□□□ -1.68
RRT16	YNL105W	SSF1	P38789	453 aa	Predicted RBP	4.58	□□□□□ -1.68
RRT16	YNL105W	PTC7	P38797	343 aa		4.58	□□□□□ -1.68
RRT16	YNL105W	PRP6	P19735	899 aa	Predicted RBP	4.57	□□□□□ -1.68
RRT16	YNL105W	GIP4	P39732	760 aa		4.57	□□□□□ -1.68
RRT16	YNL105W	RVS167	P39743	482 aa	Known RBP	4.57	□□□□□ -1.68
RRT16	YNL105W	INP54	Q08227	384 aa	Known RBP	4.57	□□□□□ -1.68
RRT16	YNL105W	TRL1	P09880	827 aa	Known RBP	4.56	□□□□□ -1.68
RRT16	YNL105W	SEN54	Q02825	467 aa	Predicted RBP	4.56	□□□□□ -1.68
RRT16	YNL105W	HAT1	Q12341	374 aa		4.56	□□□□□ -1.68
RRT16	YNL105W	YKL077W	P36081	392 aa		4.55	□□□□□ -1.68
RRT16	YNL105W	EXO5	P38289	585 aa		4.55	□□□□□ -1.68
RRT16	YNL105W	MON1	P53129	644 aa		4.55	□□□□□ -1.68
RRT16	YNL105W	PUS7	Q08647	676 aa	Known RBP	4.55	□□□□□ -1.68
RRT16	YNL105W	AIM3	P38266	947 aa	Known RBP	4.54	□□□□□ -1.68
RRT16	YNL105W	GTS1	P40956	396 aa		4.54	□□□□□ -1.68
RRT16	YNL105W	SLS1	P42900	643 aa		4.54	□□□□□ -1.68
RRT16	YNL105W	MRPL22	P53881	309 aa		4.54	□□□□□ -1.68
RRT16	YNL105W	TPP1	Q03796	238 aa		4.54	□□□□□ -1.68
RRT16	YNL105W	YDL177C	Q12257	170 aa		4.54	□□□□□ -1.68
RRT16	YNL105W	FLR1	P38124	548 aa		4.53	□□□□□ -1.68
RRT16	YNL105W	SHU2	P38957	223 aa		4.53	□□□□□ -1.68
RRT16	YNL105W	GRS1	P38088	690 aa	Known RBP	4.52	□□□□□ -1.69
RRT16	YNL105W	NEM1	P38757	446 aa		4.52	□□□□□ -1.69
RRT16	YNL105W	YAR028W	P39548	234 aa		4.52	□□□□□ -1.69
RRT16	YNL105W	NOC3	Q07896	663 aa	Predicted RBP	4.52	□□□□□ -1.69
RRT16	YNL105W	ETP1	P38748	585 aa	Known RBP	4.51	□□□□□ -1.69
RRT16	YNL105W	ERP5	P38819	212 aa		4.51	□□□□□ -1.69
RRT16	YNL105W	MDJ2	P42834	146 aa		4.51	□□□□□ -1.69
RRT16	YNL105W	RIM8	P53179	542 aa		4.51	□□□□□ -1.69
RRT16	YNL105W	HDA2	Q06629	674 aa		4.51	□□□□□ -1.69
RRT16	YNL105W	GPI13	Q07830	1017 aa		4.51	□□□□□ -1.69
RRT16	YNL105W	SAM35	P14693	329 aa		4.5	□□□□□ -1.69
RRT16	YNL105W	RET1	P22276	1149 aa	Known RBP	4.5	□□□□□ -1.69
RRT16	YNL105W	YHL012W	P38709	493 aa		4.5	□□□□□ -1.69
RRT16	YNL105W	NMD3	P38861	518 aa	Known RBP	4.5	□□□□□ -1.69
RRT16	YNL105W	MTR4	P47047	1073 aa	Known RBP	4.5	□□□□□ -1.69
RRT16	YNL105W	SAM37	P50110	327 aa		4.5	□□□□□ -1.69
RRT16	YNL105W	NOG1	Q02892	647 aa	Known RBP	4.5	□□□□□ -1.69
RRT16	YNL105W	YLR257W	Q06146	321 aa	Known RBP	4.5	□□□□□ -1.69
RRT16	YNL105W	YCS4	Q06156	1176 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms