RNA–Protein interactions for RNA: YNL087W

TCB2, Transcript of ER protein involved in ER-plasma membrane tethering, yeast

Gene TCB2, Length 3,537 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCB2	YNL087W	PRE8	P23639	250 aa		3.22	□□□□□ -1.89
TCB2	YNL087W	NUP82	P40368	713 aa		3.22	□□□□□ -1.89
TCB2	YNL087W	PIP2	P52960	996 aa		3.22	□□□□□ -1.89
TCB2	YNL087W	GDE1	Q02979	1223 aa		3.22	□□□□□ -1.89
TCB2	YNL087W	LDB19	Q12502	818 aa		3.22	□□□□□ -1.89
TCB2	YNL087W	TIF6	Q12522	245 aa	Known RBP	3.22	□□□□□ -1.89
TCB2	YNL087W	SCJ1	P25303	377 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	RBA50	Q04418	439 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	TGL1	P34163	548 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	OCT1	P35999	772 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	KSP1	P38691	1029 aa	Known RBP	3.21	□□□□□ -1.9
TCB2	YNL087W	NIT1	P40447	199 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	FIG4	P42837	879 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	YJL045W	P47052	634 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	YGL138C	P53122	345 aa		3.21	□□□□□ -1.9
TCB2	YNL087W	CUE3	P53137	624 aa	Known RBP	3.21	□□□□□ -1.9
TCB2	YNL087W	CNM67	P53865	581 aa	Known RBP	3.21	□□□□□ -1.9
TCB2	YNL087W	CUS1	Q02554	436 aa	Predicted RBP	3.21	□□□□□ -1.9
TCB2	YNL087W	CDC19	P00549	500 aa	Known RBP	3.2	□□□□□ -1.9
TCB2	YNL087W	SNA3	P14359	133 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	SER1	P33330	395 aa	Known RBP	3.2	□□□□□ -1.9
TCB2	YNL087W	KDX1	P36005	433 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	JJJ2	P46997	583 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	JJJ3	P47138	172 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	YGR125W	P53273	1036 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	ALO1	P54783	526 aa	Known RBP	3.2	□□□□□ -1.9
TCB2	YNL087W	ALG1	P16661	449 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	MAP2	P38174	421 aa	Known RBP	3.2	□□□□□ -1.9
TCB2	YNL087W	ERG7	P38604	731 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	SPR3	P41901	512 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	RIP-Chip
TCB2	YNL087W	RGT1	P32862	1170 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	MPE1	P35728	441 aa	Known RBP	3.2	□□□□□ -1.9
TCB2	YNL087W	SSP1	P38871	571 aa		3.2	□□□□□ -1.9
TCB2	YNL087W	OYE2	Q03558	400 aa	Known RBP	3.2	□□□□□ -1.9
TCB2	YNL087W	EFM2	P38347	419 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	TPM2	P40414	161 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	RIM20	Q12033	661 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	HFI1	Q12060	488 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	YLR422W	Q06409	1932 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	TCP1	P12612	559 aa	Known RBP	3.19	□□□□□ -1.9
TCB2	YNL087W	DPH2	P32461	534 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	FRD1	P32614	470 aa	Known RBP	3.19	□□□□□ -1.9
TCB2	YNL087W	APE3	P37302	537 aa	Known RBP	3.19	□□□□□ -1.9
TCB2	YNL087W	RPN1	P38764	993 aa	Known RBP	3.19	□□□□□ -1.9
TCB2	YNL087W	RTC4	P53850	401 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	PTA1	Q01329	785 aa	Predicted RBP	3.19	□□□□□ -1.9
TCB2	YNL087W	SPH1	Q06160	661 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	NKP2	Q06162	153 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	PEP3	P27801	918 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	RIP-Chip
TCB2	YNL087W	CWH41	P53008	833 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	SHE10	P53075	577 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	PUS6	P53294	404 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	YNL058C	P53947	316 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	SKY1	Q03656	742 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	YPL260W	Q08977	551 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	TIP41	Q12199	356 aa		3.19	□□□□□ -1.9
TCB2	YNL087W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
TCB2	YNL087W	CAB3	P36076	571 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	BCD1	P38772	366 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	MRPS35	P53292	345 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	RPT4	P53549	437 aa	Known RBP	3.18	□□□□□ -1.9
TCB2	YNL087W	KRE33	P53914	1056 aa	Known RBP	3.18	□□□□□ -1.9
TCB2	YNL087W	ECM7	Q06200	448 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	NUC1	P08466	329 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	CDC60	P26637	1090 aa	Known RBP	3.18	□□□□□ -1.9
TCB2	YNL087W	SPT5	P27692	1063 aa	Known RBP	3.18	□□□□□ -1.9
TCB2	YNL087W	MAL31	P38156	614 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	CTM1	P38818	585 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	HST1	P53685	503 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	MFM1	Q02783	413 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	YDL073W	Q07454	984 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	YHL050C	P38721	697 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	SDS3	P40505	327 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	LSB6	P42951	607 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	MRX6	P48564	524 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	YNL108C	P53929	270 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	PHM6	Q05637	104 aa		3.18	□□□□□ -1.9
TCB2	YNL087W	CSR1	Q06705	408 aa	Known RBP	3.18	□□□□□ -1.9
TCB2	YNL087W	KEX1	P09620	729 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	SSA4	P22202	642 aa	Known RBP	3.17	□□□□□ -1.9
TCB2	YNL087W	SPC110	P32380	944 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	FBP26	P32604	452 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	PXL1	P36166	706 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	YLR225C	Q05948	407 aa	Known RBP	3.17	□□□□□ -1.9
TCB2	YNL087W	VIP1	Q06685	1146 aa	Known RBP	3.17	□□□□□ -1.9
TCB2	YNL087W	GFA1	P14742	717 aa	Known RBP	3.17	□□□□□ -1.9
TCB2	YNL087W	STB5	P38699	743 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	PAN5	P38787	379 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	MDR1	P53258	950 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	SPO1	P53541	631 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	RPL22B	P56628	122 aa	Known RBP	3.17	□□□□□ -1.9
TCB2	YNL087W	DSE3	Q08729	430 aa		3.17	□□□□□ -1.9
TCB2	YNL087W	SRP54	P20424	541 aa	Known RBP	3.16	□□□□□ -1.9
TCB2	YNL087W	MAK11	P20484	414 aa	Known RBP	3.16	□□□□□ -1.9
TCB2	YNL087W	MAK31	P23059	88 aa		3.16	□□□□□ -1.9
TCB2	YNL087W	ANP1	P32629	500 aa		3.16	□□□□□ -1.9
TCB2	YNL087W	VPS29	P38759	282 aa		3.16	□□□□□ -1.9
TCB2	YNL087W	YGL082W	P53155	381 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms