RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W YGR130CP53278 816 aa6.48□□□□□ -1.37
ROT1YMR200W YAF9P53930 226 aa6.48□□□□□ -1.37
ROT1YMR200W CHS2P14180 963 aa6.47□□□□□ -1.37
ROT1YMR200W PRP5P21372 849 aaPredicted RBP6.47□□□□□ -1.37
ROT1YMR200W SWE1P32944 819 aa6.47□□□□□ -1.37
ROT1YMR200W ECM2P38241 364 aaKnown RBP6.47□□□□□ -1.37
ROT1YMR200W IPL1P38991 367 aa6.47□□□□□ -1.37
ROT1YMR200W MED7Q08278 222 aa6.47□□□□□ -1.37
ROT1YMR200W HTS1P07263 546 aaKnown RBP6.46□□□□□ -1.38
ROT1YMR200W NNF1P47149 201 aa6.46□□□□□ -1.38
ROT1YMR200W YMR074CQ04773 145 aa6.46□□□□□ -1.38
ROT1YMR200W INP54Q08227 384 aaKnown RBP6.46□□□□□ -1.38
ROT1YMR200W TOS1P38288 455 aa6.45□□□□□ -1.38
ROT1YMR200W NMD2P38798 1089 aaKnown RBP6.45□□□□□ -1.38
ROT1YMR200W STM1P39015 273 aaKnown RBP6.45□□□□□ -1.38
ROT1YMR200W SAP155P43612 1002 aa6.45□□□□□ -1.38
ROT1YMR200W YIG1Q08956 461 aa6.45□□□□□ -1.38
ROT1YMR200W CTH1P47976 325 aa6.44□□□□□ -1.38
ROT1YMR200W NUT1P53114 1132 aa6.44□□□□□ -1.38
ROT1YMR200W VPS72Q03388 795 aa6.44□□□□□ -1.38
ROT1YMR200W YOR223WQ12015 292 aa6.44□□□□□ -1.38
ROT1YMR200W SEC20P28791 383 aa6.43□□□□□ -1.38
ROT1YMR200W YHL050CP38721 697 aa6.43□□□□□ -1.38
ROT1YMR200W YHR219WP38900 624 aa6.43□□□□□ -1.38
ROT1YMR200W GPT2P36148 743 aa6.42□□□□□ -1.38
ROT1YMR200W SPO74P45819 413 aa6.42□□□□□ -1.38
ROT1YMR200W GCV1P48015 400 aa6.42□□□□□ -1.38
ROT1YMR200W MON1P53129 644 aa6.42□□□□□ -1.38
ROT1YMR200W GIC2Q06648 383 aa6.42□□□□□ -1.38
ROT1YMR200W CYC7P00045 113 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-LR4P0C2I8 440 aaKnown RBP6.41□□□□□ -1.38
ROT1YMR200W TY1A-DR6P0CX70 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-ER1P0CX71 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-LR2P0CX72 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-PLP0CX73 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-JR1P0CX74 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-LR3P0CX75 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-ML2P0CX76 440 aa6.41□□□□□ -1.38
ROT1YMR200W NOC3Q07896 663 aaPredicted RBP6.41□□□□□ -1.38
ROT1YMR200W TY1A-GR1Q12085 440 aa6.41□□□□□ -1.38
ROT1YMR200W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.41□□□□□ -1.38
ROT1YMR200W TY1A-OLQ92392 440 aaKnown RBP6.41□□□□□ -1.38
ROT1YMR200W DOT1Q04089 582 aaKnown RBP6.4□□□□□ -1.38
ROT1YMR200W PMT7Q06644 662 aa6.4□□□□□ -1.38
ROT1YMR200W MSB1P21339 1137 aaKnown RBP6.39□□□□□ -1.39
ROT1YMR200W MCM5P29496 775 aaKnown RBP6.39□□□□□ -1.39
ROT1YMR200W PUB1P32588 453 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39 RIP-Chip
ROT1YMR200W LIP5P32875 414 aa6.39□□□□□ -1.39
ROT1YMR200W SEA4P38164 1038 aa6.39□□□□□ -1.39
ROT1YMR200W UTP22P53254 1237 aaPredicted RBP6.39□□□□□ -1.39
ROT1YMR200W MEC3Q02574 474 aa6.39□□□□□ -1.39
ROT1YMR200W MAG2Q06436 670 aaKnown RBP6.39□□□□□ -1.39
ROT1YMR200W BRE4Q07660 1125 aa6.39□□□□□ -1.39
ROT1YMR200W RNH70P53331 553 aa6.38□□□□□ -1.39
ROT1YMR200W ALG6Q12001 544 aaKnown RBP6.38□□□□□ -1.39
ROT1YMR200W GLT1Q12680 2145 aaKnown RBP6.38□□□□□ -1.39
ROT1YMR200W GCD1P09032 578 aaPredicted RBP6.37□□□□□ -1.39
ROT1YMR200W WHI3P34761 661 aaKnown RBP6.37□□□□□ -1.39
ROT1YMR200W OSW7P43611 510 aa6.37□□□□□ -1.39
ROT1YMR200W SAM37P50110 327 aa6.37□□□□□ -1.39
ROT1YMR200W SVF1Q05515 481 aa6.37□□□□□ -1.39
ROT1YMR200W MET4P32389 672 aa6.36□□□□□ -1.39
ROT1YMR200W REI1P38344 393 aaPredicted RBP6.36□□□□□ -1.39
ROT1YMR200W RVS167P39743 482 aaKnown RBP6.36□□□□□ -1.39
ROT1YMR200W POL32P47110 350 aa6.36□□□□□ -1.39
ROT1YMR200W SDH1Q00711 640 aa6.36□□□□□ -1.39
ROT1YMR200W RRP15Q06511 250 aaPredicted RBP6.36□□□□□ -1.39
ROT1YMR200W MSC6Q08818 692 aaKnown RBP6.36□□□□□ -1.39
ROT1YMR200W YLL054CQ12244 843 aa6.36□□□□□ -1.39
ROT1YMR200W PHO4P07270 312 aaKnown RBP6.35□□□□□ -1.39
ROT1YMR200W EXO5P38289 585 aa6.35□□□□□ -1.39
ROT1YMR200W MMM1P41800 426 aa6.35□□□□□ -1.39
ROT1YMR200W YCS4Q06156 1176 aa6.35□□□□□ -1.39
ROT1YMR200W UBX5Q06682 500 aa6.35□□□□□ -1.39
ROT1YMR200W WHI5Q12416 295 aa6.35□□□□□ -1.39
ROT1YMR200W YOL098CQ12496 1037 aa6.35□□□□□ -1.39
ROT1YMR200W ATE1P16639 503 aa6.34□□□□□ -1.39
ROT1YMR200W UGA4P32837 571 aa6.34□□□□□ -1.39
ROT1YMR200W PPG1P32838 368 aa6.34□□□□□ -1.39
ROT1YMR200W TOM20P35180 183 aa6.34□□□□□ -1.39
ROT1YMR200W RRP14P36080 434 aaKnown RBP6.34□□□□□ -1.39
ROT1YMR200W PPX1P38698 397 aa6.34□□□□□ -1.39
ROT1YMR200W CIC1P38779 376 aaKnown RBP6.34□□□□□ -1.39
ROT1YMR200W TOS4Q06266 489 aa6.34□□□□□ -1.39
ROT1YMR200W MSH4P40965 878 aaPredicted RBP6.33□□□□□ -1.4
ROT1YMR200W EAR1Q03212 550 aa6.33□□□□□ -1.4
ROT1YMR200W JIP5Q06214 492 aaPredicted RBP6.33□□□□□ -1.4
ROT1YMR200W BUD21Q08492 214 aaPredicted RBP6.33□□□□□ -1.4
ROT1YMR200W NEM1P38757 446 aa6.32□□□□□ -1.4
ROT1YMR200W SLS1P42900 643 aa6.32□□□□□ -1.4
ROT1YMR200W CIT3P43635 486 aa6.32□□□□□ -1.4
ROT1YMR200W OYE2Q03558 400 aaKnown RBP6.32□□□□□ -1.4
ROT1YMR200W GIN4Q12263 1142 aa6.32□□□□□ -1.4
ROT1YMR200W RPS4AP0CX35 261 aaKnown RBP6.31□□□□□ -1.4
ROT1YMR200W RPS4BP0CX36 261 aaKnown RBP6.31□□□□□ -1.4
ROT1YMR200W TSR4P25040 408 aa6.31□□□□□ -1.4
ROT1YMR200W PRP40P33203 583 aaKnown RBP6.31□□□□□ -1.4
ROT1YMR200W DAK2P43550 591 aa6.31□□□□□ -1.4
ROT1YMR200W YGR045CP53229 120 aa6.31□□□□□ -1.4
ROT1YMR200W TPO2P53283 614 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms