RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C YLL054CQ12244 843 aa6.59□□□□□ -1.35
ATG16YMR159C AI3P03877 415 aa6.58□□□□□ -1.36
ATG16YMR159C CYC8P14922 966 aa6.58□□□□□ -1.36
ATG16YMR159C RPS26AP39938 119 aaKnown RBP6.58□□□□□ -1.36
ATG16YMR159C RPS26BP39939 119 aaKnown RBP6.58□□□□□ -1.36
ATG16YMR159C SNU71P53207 620 aaKnown RBP6.58□□□□□ -1.36
ATG16YMR159C RMD1Q03441 430 aa6.58□□□□□ -1.36
ATG16YMR159C YCK2P23292 546 aaKnown RBP6.57□□□□□ -1.36
ATG16YMR159C UGA4P32837 571 aa6.57□□□□□ -1.36
ATG16YMR159C YKL077WP36081 392 aa6.57□□□□□ -1.36
ATG16YMR159C FYV10P40492 516 aa6.57□□□□□ -1.36
ATG16YMR159C MRPS18P42847 217 aa6.57□□□□□ -1.36
ATG16YMR159C MEC3Q02574 474 aa6.57□□□□□ -1.36
ATG16YMR159C OYE2Q03558 400 aaKnown RBP6.57□□□□□ -1.36
ATG16YMR159C TY1A-NL1Q12391 440 aaKnown RBP6.57□□□□□ -1.36
ATG16YMR159C RAD2P07276 1031 aa6.56□□□□□ -1.36
ATG16YMR159C PRE9P23638 258 aaKnown RBP6.56□□□□□ -1.36
ATG16YMR159C MCM2P29469 868 aa6.56□□□□□ -1.36
ATG16YMR159C EXO5P38289 585 aa6.56□□□□□ -1.36
ATG16YMR159C SQT1P35184 431 aa6.55□□□□□ -1.36
ATG16YMR159C RSM26P47141 266 aa6.55□□□□□ -1.36
ATG16YMR159C ARI1P53111 347 aaKnown RBP6.55□□□□□ -1.36
ATG16YMR159C ESF1Q06344 628 aaKnown RBP6.55□□□□□ -1.36
ATG16YMR159C ERS1P17261 260 aa6.54□□□□□ -1.36
ATG16YMR159C MSH3P25336 1018 aa6.54□□□□□ -1.36
ATG16YMR159C RSC6P25632 483 aa6.54□□□□□ -1.36
ATG16YMR159C PEX28P38848 579 aa6.54□□□□□ -1.36
ATG16YMR159C SLN1P39928 1220 aaPredicted RBP6.54□□□□□ -1.36
ATG16YMR159C PRY1P47032 299 aa6.54□□□□□ -1.36
ATG16YMR159C SPR28Q04921 423 aa6.54□□□□□ -1.36
ATG16YMR159C SVF1Q05515 481 aa6.54□□□□□ -1.36
ATG16YMR159C GAS5Q08193 484 aa6.54□□□□□ -1.36
ATG16YMR159C TY1A-LR4P0C2I8 440 aaKnown RBP6.53□□□□□ -1.36
ATG16YMR159C TY1A-DR6P0CX70 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-ER1P0CX71 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-LR2P0CX72 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-PLP0CX73 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-JR1P0CX74 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-LR3P0CX75 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-ML2P0CX76 440 aa6.53□□□□□ -1.36
ATG16YMR159C TAF13P11747 167 aa6.53□□□□□ -1.36
ATG16YMR159C VMA4P22203 233 aaKnown RBP6.53□□□□□ -1.36
ATG16YMR159C PIC2P40035 300 aa6.53□□□□□ -1.36
ATG16YMR159C NCE103P53615 221 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-GR1Q12085 440 aa6.53□□□□□ -1.36
ATG16YMR159C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.53□□□□□ -1.36
ATG16YMR159C TY1A-OLQ92392 440 aaKnown RBP6.53□□□□□ -1.36
ATG16YMR159C TAT1P38085 619 aa6.52□□□□□ -1.37
ATG16YMR159C RDH54P38086 958 aa6.52□□□□□ -1.37
ATG16YMR159C KIP3P53086 805 aaKnown RBP6.52□□□□□ -1.37
ATG16YMR159C YGL140CP53120 1219 aa6.52□□□□□ -1.37
ATG16YMR159C PEX13P80667 386 aa6.52□□□□□ -1.37
ATG16YMR159C YMR074CQ04773 145 aa6.52□□□□□ -1.37
ATG16YMR159C YOR223WQ12015 292 aa6.52□□□□□ -1.37
ATG16YMR159C SEC23P15303 768 aaKnown RBP6.51□□□□□ -1.37
ATG16YMR159C NAP1P25293 417 aaKnown RBP6.51□□□□□ -1.37
ATG16YMR159C REI1P38344 393 aaPredicted RBP6.51□□□□□ -1.37
ATG16YMR159C NEM1P38757 446 aa6.5□□□□□ -1.37
ATG16YMR159C MTR4P47047 1073 aaKnown RBP6.5□□□□□ -1.37
ATG16YMR159C REC8Q12188 680 aa6.5□□□□□ -1.37
ATG16YMR159C PEP7P32609 515 aa6.49□□□□□ -1.37
ATG16YMR159C SLS1P42900 643 aa6.49□□□□□ -1.37
ATG16YMR159C CCT8P47079 568 aaKnown RBP6.49□□□□□ -1.37
ATG16YMR159C MTC5Q03897 1148 aa6.49□□□□□ -1.37
ATG16YMR159C UTP5Q04177 643 aaKnown RBP6.49□□□□□ -1.37
ATG16YMR159C PGM1P33401 570 aaKnown RBP6.48□□□□□ -1.37
ATG16YMR159C YPL034WQ03083 165 aa6.48□□□□□ -1.37
ATG16YMR159C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
ATG16YMR159C HEM13P11353 328 aaKnown RBP6.47□□□□□ -1.37
ATG16YMR159C MNR2P35724 969 aa6.47□□□□□ -1.37
ATG16YMR159C PAM1P37304 830 aaKnown RBP6.47□□□□□ -1.37
ATG16YMR159C ENT3P47160 408 aa6.47□□□□□ -1.37
ATG16YMR159C RKM2Q03942 479 aa6.47□□□□□ -1.37
ATG16YMR159C DOT1Q04089 582 aaKnown RBP6.47□□□□□ -1.37
ATG16YMR159C MCA1Q08601 432 aa6.46□□□□□ -1.38
ATG16YMR159C XKS1P42826 600 aa6.45□□□□□ -1.38
ATG16YMR159C YGR045CP53229 120 aa6.45□□□□□ -1.38
ATG16YMR159C RGA2Q06407 1009 aa6.45□□□□□ -1.38
ATG16YMR159C AVO1Q08236 1176 aa6.45□□□□□ -1.38
ATG16YMR159C ADD66P36040 267 aa6.44□□□□□ -1.38
ATG16YMR159C GNP1P48813 663 aa6.44□□□□□ -1.38
ATG16YMR159C ALG6Q12001 544 aaKnown RBP6.44□□□□□ -1.38
ATG16YMR159C GCR1P07261 785 aa6.43□□□□□ -1.38
ATG16YMR159C PET112P33893 541 aa6.43□□□□□ -1.38
ATG16YMR159C GPT2P36148 743 aa6.43□□□□□ -1.38
ATG16YMR159C SAF1P38352 637 aa6.43□□□□□ -1.38
ATG16YMR159C YAR028WP39548 234 aa6.43□□□□□ -1.38
ATG16YMR159C LSB3P43603 459 aaKnown RBP6.43□□□□□ -1.38
ATG16YMR159C SIW14P53965 281 aa6.43□□□□□ -1.38
ATG16YMR159C EST2Q06163 884 aa6.43□□□□□ -1.38
ATG16YMR159C HDA2Q06629 674 aa6.43□□□□□ -1.38
ATG16YMR159C GIC2Q06648 383 aa6.43□□□□□ -1.38
ATG16YMR159C RTT10Q08924 1013 aa6.43□□□□□ -1.38
ATG16YMR159C NNK1P36003 928 aa6.42□□□□□ -1.38
ATG16YMR159C ATG14P38270 344 aa6.42□□□□□ -1.38
ATG16YMR159C SPO74P45819 413 aa6.42□□□□□ -1.38
ATG16YMR159C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
ATG16YMR159C LAP2Q10740 671 aa6.42□□□□□ -1.38
ATG16YMR159C COQ2P32378 372 aa6.41□□□□□ -1.38
ATG16YMR159C HSE1P38753 452 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 117.5 ms