RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C RPS31P05759 152 aaKnown RBP1.67□□□□□ -2.14
NUP188YML103C HSP60P19882 572 aaKnown RBP1.67□□□□□ -2.14
NUP188YML103C IRR1P40541 1150 aa1.67□□□□□ -2.14
NUP188YML103C RNH70P53331 553 aa1.67□□□□□ -2.14
NUP188YML103C GDE1Q02979 1223 aa1.67□□□□□ -2.14
NUP188YML103C BDF2Q07442 638 aa1.67□□□□□ -2.14
NUP188YML103C HRK1Q08732 759 aaKnown RBP1.67□□□□□ -2.14
NUP188YML103C YPL260WQ08977 551 aa1.67□□□□□ -2.14
NUP188YML103C MRC1P25588 1096 aa1.66□□□□□ -2.14
NUP188YML103C DPB3P27344 201 aa1.66□□□□□ -2.14
NUP188YML103C KTR2P33550 425 aa1.66□□□□□ -2.14
NUP188YML103C SCW11P53189 542 aa1.66□□□□□ -2.14
NUP188YML103C DBP5P20449 482 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C GSY1P23337 708 aa1.66□□□□□ -2.14
NUP188YML103C YEL1P34225 687 aa1.66□□□□□ -2.14
NUP188YML103C RPN3P40016 523 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C HUL4P40985 892 aa1.66□□□□□ -2.14
NUP188YML103C TIM54P47045 478 aa1.66□□□□□ -2.14
NUP188YML103C LYS5P50113 272 aa1.66□□□□□ -2.14
NUP188YML103C ENV11P53246 860 aa1.66□□□□□ -2.14
NUP188YML103C YMR265CQ03508 461 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C MTC5Q03897 1148 aa1.66□□□□□ -2.14
NUP188YML103C VMS1Q04311 632 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C GLO4Q12320 285 aa1.66□□□□□ -2.14
NUP188YML103C TRK1P12685 1235 aa1.66□□□□□ -2.14
NUP188YML103C FAA3P39002 694 aa1.66□□□□□ -2.14
NUP188YML103C PPT1P53043 513 aa1.66□□□□□ -2.14
NUP188YML103C ITC1P53125 1264 aa1.66□□□□□ -2.14
NUP188YML103C MEC3Q02574 474 aa1.66□□□□□ -2.14
NUP188YML103C EMG1Q06287 252 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C YDL124WQ07551 312 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C YIG1Q08956 461 aa1.66□□□□□ -2.14
NUP188YML103C CIT1P00890 479 aa1.66□□□□□ -2.14
NUP188YML103C DIT1P21623 536 aa1.66□□□□□ -2.14
NUP188YML103C RPC82P32349 654 aa1.66□□□□□ -2.14
NUP188YML103C PBP2P38151 413 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
NUP188YML103C BRE2P43132 505 aa1.66□□□□□ -2.14
NUP188YML103C UTP22P53254 1237 aaPredicted RBP1.66□□□□□ -2.14
NUP188YML103C UTP8P53276 713 aaKnown RBP1.66□□□□□ -2.14
NUP188YML103C UGO1Q03327 502 aa1.66□□□□□ -2.14
NUP188YML103C MRL1Q06815 381 aa1.66□□□□□ -2.14
NUP188YML103C GNT1Q12096 491 aa1.66□□□□□ -2.14
NUP188YML103C PHO8P11491 566 aa1.65□□□□□ -2.14
NUP188YML103C RAD4P14736 754 aa1.65□□□□□ -2.14
NUP188YML103C FPS1P23900 669 aa1.65□□□□□ -2.14
NUP188YML103C SHM1P37292 490 aaPredicted RBP1.65□□□□□ -2.14
NUP188YML103C BSD2P38356 321 aa1.65□□□□□ -2.14
NUP188YML103C CNN1P43618 361 aa1.65□□□□□ -2.14
NUP188YML103C YGL140CP53120 1219 aa1.65□□□□□ -2.14
NUP188YML103C RPP2AP05319 106 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C MET6P05694 767 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C NPR1P22211 790 aa1.65□□□□□ -2.15
NUP188YML103C XKS1P42826 600 aa1.65□□□□□ -2.15
NUP188YML103C GNP1P48813 663 aa1.65□□□□□ -2.15
NUP188YML103C BIO5P53744 561 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C SPR28Q04921 423 aa1.65□□□□□ -2.15
NUP188YML103C FMP25Q08023 583 aa1.65□□□□□ -2.15
NUP188YML103C YLL058WQ12198 575 aa1.65□□□□□ -2.15
NUP188YML103C TCB1Q12466 1186 aa1.65□□□□□ -2.15
NUP188YML103C CMR1Q12510 522 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C CIT2P08679 460 aa1.65□□□□□ -2.15
NUP188YML103C ADD66P36040 267 aa1.65□□□□□ -2.15
NUP188YML103C BUD6P41697 788 aa1.65□□□□□ -2.15
NUP188YML103C SRP1Q02821 542 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C EST2Q06163 884 aa1.65□□□□□ -2.15
NUP188YML103C PPM2Q08282 695 aa1.65□□□□□ -2.15
NUP188YML103C SSB1P11484 613 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C SAC7P17121 654 aa1.65□□□□□ -2.15
NUP188YML103C YKL107WP34251 309 aa1.65□□□□□ -2.15
NUP188YML103C RDH54P38086 958 aa1.65□□□□□ -2.15
NUP188YML103C OSH7P38755 437 aa1.65□□□□□ -2.15
NUP188YML103C CEM1P39525 442 aa1.65□□□□□ -2.15
NUP188YML103C SSB2P40150 613 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C TYW3P53177 273 aa1.65□□□□□ -2.15
NUP188YML103C YNL165WP53891 406 aa1.65□□□□□ -2.15
NUP188YML103C SUB1P54000 292 aaKnown RBP1.65□□□□□ -2.15
NUP188YML103C IDI1P15496 288 aa1.64□□□□□ -2.15
NUP188YML103C SYP1P25623 870 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C KNS1P32350 737 aaPredicted RBP1.64□□□□□ -2.15
NUP188YML103C YKR078WP36158 585 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C MRPL16P38064 232 aa1.64□□□□□ -2.15
NUP188YML103C AMN1P38285 549 aaPredicted RBP1.64□□□□□ -2.15
NUP188YML103C PIC2P40035 300 aa1.64□□□□□ -2.15
NUP188YML103C INP51P40559 946 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C FAA4P47912 694 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C HTS1P07263 546 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C HVG1P0CE11 249 aa1.64□□□□□ -2.15
NUP188YML103C SBP1P10080 294 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C SFP1P32432 683 aa1.64□□□□□ -2.15
NUP188YML103C DUT1P33317 147 aa1.64□□□□□ -2.15
NUP188YML103C PAF1P38351 445 aa1.64□□□□□ -2.15
NUP188YML103C NAB3P38996 802 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
NUP188YML103C NUP82P40368 713 aa1.64□□□□□ -2.15
NUP188YML103C IOC3P43596 787 aa1.64□□□□□ -2.15
NUP188YML103C AVO1Q08236 1176 aa1.64□□□□□ -2.15
NUP188YML103C DPH6Q12429 685 aa1.64□□□□□ -2.15
NUP188YML103C DPS1P04802 557 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C GCR1P07261 785 aa1.64□□□□□ -2.15
NUP188YML103C GRX1P25373 110 aaKnown RBP1.64□□□□□ -2.15
NUP188YML103C MSH2P25847 964 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms