RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	APL2	P36000	726 aa	Predicted RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	ABZ1	P37254	787 aa	Predicted RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	RTT106	P40161	455 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	MET18	P40469	1032 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	ENP2	P48234	707 aa	Known RBP	4.56	□□□□□ -1.68
YSH1	YLR277C	VPS60	Q03390	229 aa		4.56	□□□□□ -1.68
YSH1	YLR277C	LEU1	P07264	779 aa	Known RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	RPB4	P20433	221 aa	Predicted RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	KRR1	P25586	316 aa	Predicted RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	PAP1	P29468	568 aa	Known RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	APD1	P38281	316 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	STM1	P39015	273 aa	Known RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	MXR1	P40029	184 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	RIM21	P48565	533 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	SEN54	Q02825	467 aa	Predicted RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	MTC5	Q03897	1148 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	ITT1	Q04638	464 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	UTP13	Q05946	817 aa	Known RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	TOP2	P06786	1428 aa	Known RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	KIP2	P28743	706 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	SWC3	P31376	625 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	NUD1	P32336	851 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	TFC3	P34111	1160 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	VPS24	P36095	224 aa	Known RBP	4.55	□□□□□ -1.68
YSH1	YLR277C	FMP10	P40098	244 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	ALG2	P43636	503 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	NIS1	P53939	407 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	SAS4	Q04003	481 aa		4.55	□□□□□ -1.68
YSH1	YLR277C	SSK22	P25390	1331 aa	Predicted RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	THS1	P04801	734 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	NOT3	P06102	836 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	RRP1	P35178	278 aa	Predicted RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	CIN4	P39110	191 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	FTR1	P40088	404 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	RSM25	P40496	264 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	PXA1	P41909	870 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	SET2	P46995	733 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	OYE2	Q03558	400 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	YLH47	Q06493	454 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	FOB1	O13329	566 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	HOM3	P10869	527 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	TRX2	P22803	104 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	AAD3	P25612	363 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	CDC48	P25694	835 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	GRX4	P32642	244 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	PTR2	P32901	601 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	PTH2	P34222	208 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	APE4	P38821	490 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	SXM1	Q04175	944 aa	Known RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	NOC3	Q07896	663 aa	Predicted RBP	4.54	□□□□□ -1.68
YSH1	YLR277C	YPL191C	Q08930	360 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	YIG1	Q08956	461 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	GNT1	Q12096	491 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	YOL087C	Q99247	1116 aa		4.54	□□□□□ -1.68
YSH1	YLR277C	MYO4	P32492	1471 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	PMS1	P14242	873 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	SEN2	P16658	377 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	OCA4	P25366	362 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
YSH1	YLR277C	PET100	P38958	111 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	IOC3	P43596	787 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	VTC4	P47075	721 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	ACF4	P47129	309 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	STR2	P47164	639 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	ISM1	P48526	1002 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	YGR016W	P53209	190 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	UBX2	Q04228	584 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	RAD33	Q04231	177 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	YPR109W	Q06104	294 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	GRC3	Q07845	632 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	YOR352W	Q08816	343 aa		4.53	□□□□□ -1.68
YSH1	YLR277C	SPC72	P39723	622 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	TMN3	P40071	706 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	ATG3	P40344	310 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	MAD1	P40957	749 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	HOL1	P53389	586 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	YMR102C	Q03177	834 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	FUS2	Q05670	677 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	ATG38	Q05789	226 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	NNT1	Q05874	261 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	ISA1	Q07821	250 aa	Predicted RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	BUD20	Q08004	166 aa	Predicted RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	RIO1	Q12196	484 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	PRT1	P06103	763 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	GLN1	P32288	370 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	PLC1	P32383	869 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	ECM32	P32644	1121 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	STO1	P34160	861 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	YGL140C	P53120	1219 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	DCP2	P53550	970 aa	Known RBP	4.52	□□□□□ -1.69
YSH1	YLR277C	GIC2	Q06648	383 aa		4.52	□□□□□ -1.69
YSH1	YLR277C	SEC8	P32855	1065 aa		4.51	□□□□□ -1.69
YSH1	YLR277C	SLD2	P34252	453 aa		4.51	□□□□□ -1.69
YSH1	YLR277C	YBL028C	P38202	106 aa		4.51	□□□□□ -1.69
YSH1	YLR277C	PEX18	P38855	283 aa		4.51	□□□□□ -1.69
YSH1	YLR277C	EFM5	P53200	248 aa	Known RBP	4.51	□□□□□ -1.69
YSH1	YLR277C	KRE28	Q04431	385 aa		4.51	□□□□□ -1.69
YSH1	YLR277C	DNL4	Q08387	944 aa	Predicted RBP	4.51	□□□□□ -1.69
YSH1	YLR277C	HEM1	P09950	548 aa	Predicted RBP	4.51	□□□□□ -1.69
YSH1	YLR277C	CSE1	P33307	960 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms