RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YPR084WQ06821 456 aa4.35□□□□□ -1.71
LCB5YLR260W SCT1P32784 759 aa4.34□□□□□ -1.71
LCB5YLR260W MET1P36150 593 aa4.34□□□□□ -1.71
LCB5YLR260W NYV1Q12255 253 aa4.34□□□□□ -1.71
LCB5YLR260W RDS2P19541 446 aaKnown RBP4.34□□□□□ -1.71
LCB5YLR260W PPX1P38698 397 aa4.34□□□□□ -1.71
LCB5YLR260W MDJ2P42834 146 aa4.34□□□□□ -1.71
LCB5YLR260W UTP22P53254 1237 aaPredicted RBP4.34□□□□□ -1.71
LCB5YLR260W RPN4Q03465 531 aa4.34□□□□□ -1.71
LCB5YLR260W VAC17P25591 423 aa4.33□□□□□ -1.72
LCB5YLR260W NTH2P35172 780 aa4.33□□□□□ -1.72
LCB5YLR260W NOC2P39744 710 aaKnown RBP4.33□□□□□ -1.72
LCB5YLR260W BUD6P41697 788 aa4.33□□□□□ -1.72
LCB5YLR260W EMP47P43555 445 aa4.33□□□□□ -1.72
LCB5YLR260W MSN5P52918 1224 aa4.33□□□□□ -1.72
LCB5YLR260W PAP2P53632 584 aaKnown RBP4.33□□□□□ -1.72
LCB5YLR260W ALD6P54115 500 aaKnown RBP4.33□□□□□ -1.72
LCB5YLR260W FRA1Q07825 749 aa4.33□□□□□ -1.72
LCB5YLR260W ALE1Q08548 619 aa4.33□□□□□ -1.72
LCB5YLR260W CTI6Q08923 506 aa4.33□□□□□ -1.72
LCB5YLR260W MRF1P30775 413 aaPredicted RBP4.33□□□□□ -1.72
LCB5YLR260W SEC6P32844 805 aa4.33□□□□□ -1.72
LCB5YLR260W RPS0AP32905 252 aaKnown RBP4.33□□□□□ -1.72
LCB5YLR260W GRX7P38068 203 aa4.33□□□□□ -1.72
LCB5YLR260W VPS27P40343 622 aaKnown RBP4.33□□□□□ -1.72
LCB5YLR260W YJR107WP47145 328 aa4.33□□□□□ -1.72
LCB5YLR260W YJR142WP47173 342 aa4.33□□□□□ -1.72
LCB5YLR260W ECM23Q02710 187 aa4.33□□□□□ -1.72
LCB5YLR260W KAR5Q04746 504 aa4.33□□□□□ -1.72
LCB5YLR260W NSE3Q05541 303 aa4.33□□□□□ -1.72
LCB5YLR260W COG4Q06096 861 aa4.33□□□□□ -1.72
LCB5YLR260W RLP24Q07915 199 aaKnown RBP4.33□□□□□ -1.72
LCB5YLR260W GUT2P32191 649 aa4.32□□□□□ -1.72
LCB5YLR260W PEP12P32854 288 aa4.32□□□□□ -1.72
LCB5YLR260W GRS1P38088 690 aaKnown RBP4.32□□□□□ -1.72
LCB5YLR260W ERT1P38140 529 aa4.32□□□□□ -1.72
LCB5YLR260W TPS3P38426 1054 aaKnown RBP4.32□□□□□ -1.72
LCB5YLR260W BUD27P43573 796 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
LCB5YLR260W SSF2Q12153 453 aaPredicted RBP4.32□□□□□ -1.72
LCB5YLR260W MNL2Q12205 849 aa4.32□□□□□ -1.72
LCB5YLR260W YGR161W-CQ3E744 92 aa4.32□□□□□ -1.72
LCB5YLR260W PBP2P38151 413 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
LCB5YLR260W FUI1P38196 639 aa4.31□□□□□ -1.72
LCB5YLR260W XDJ1P39102 459 aa4.31□□□□□ -1.72
LCB5YLR260W MNN1P39106 762 aa4.31□□□□□ -1.72
LCB5YLR260W SAP155P43612 1002 aa4.31□□□□□ -1.72
LCB5YLR260W CWH41P53008 833 aa4.31□□□□□ -1.72
LCB5YLR260W STE20Q03497 939 aaKnown RBP4.31□□□□□ -1.72
LCB5YLR260W NKP1Q12493 238 aa4.31□□□□□ -1.72
LCB5YLR260W FAS2P19097 1887 aaKnown RBP4.31□□□□□ -1.72
LCB5YLR260W MFT1P33441 392 aaKnown RBP4.31□□□□□ -1.72
LCB5YLR260W MGE1P38523 228 aa4.31□□□□□ -1.72
LCB5YLR260W BDP1P46678 594 aa4.31□□□□□ -1.72
LCB5YLR260W APL6P46682 809 aa4.31□□□□□ -1.72
LCB5YLR260W YGL081WP53156 320 aa4.31□□□□□ -1.72
LCB5YLR260W CTF4Q01454 927 aa4.31□□□□□ -1.72
LCB5YLR260W SVL3Q03088 825 aaKnown RBP4.31□□□□□ -1.72
LCB5YLR260W ENT2Q05785 613 aa4.31□□□□□ -1.72
LCB5YLR260W AOS1Q06624 347 aa4.31□□□□□ -1.72
LCB5YLR260W CTT1P06115 562 aa4.3□□□□□ -1.72
LCB5YLR260W YER156CP40093 338 aaKnown RBP4.3□□□□□ -1.72
LCB5YLR260W RMT2Q03305 412 aa4.3□□□□□ -1.72
LCB5YLR260W CAF20P12962 161 aaKnown RBP4.3□□□□□ -1.72
LCB5YLR260W TRX2P22803 104 aaKnown RBP4.3□□□□□ -1.72
LCB5YLR260W KCC4P25389 1037 aa4.3□□□□□ -1.72
LCB5YLR260W SMY1P32364 656 aaKnown RBP4.3□□□□□ -1.72
LCB5YLR260W UBP12P39538 1254 aa4.3□□□□□ -1.72
LCB5YLR260W YEN1P40028 759 aa4.3□□□□□ -1.72
LCB5YLR260W MPP10P47083 593 aaKnown RBP4.3□□□□□ -1.72
LCB5YLR260W CEF1Q03654 590 aaPredicted RBP4.3□□□□□ -1.72
LCB5YLR260W CDC53Q12018 815 aaKnown RBP4.3□□□□□ -1.72
LCB5YLR260W STI1P15705 589 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
LCB5YLR260W PWP2P25635 923 aaKnown RBP4.29□□□□□ -1.72
LCB5YLR260W VPS24P36095 224 aaKnown RBP4.29□□□□□ -1.72
LCB5YLR260W SQS1P53866 767 aaKnown RBP4.29□□□□□ -1.72
LCB5YLR260W PUS5Q06244 254 aa4.29□□□□□ -1.72
LCB5YLR260W THS1P04801 734 aaKnown RBP4.28□□□□□ -1.72
LCB5YLR260W APL2P36000 726 aaPredicted RBP4.28□□□□□ -1.72
LCB5YLR260W FYV10P40492 516 aa4.28□□□□□ -1.72
LCB5YLR260W IES1P43579 692 aa4.28□□□□□ -1.72
LCB5YLR260W YGL082WP53155 381 aa4.28□□□□□ -1.72
LCB5YLR260W VPS16Q03308 798 aa4.28□□□□□ -1.72
LCB5YLR260W HKR1P41809 1802 aa4.28□□□□□ -1.72
LCB5YLR260W MET6P05694 767 aaKnown RBP4.28□□□□□ -1.72
LCB5YLR260W DAL5P15365 543 aa4.28□□□□□ -1.72
LCB5YLR260W MET4P32389 672 aa4.28□□□□□ -1.72
LCB5YLR260W SER1P33330 395 aaKnown RBP4.28□□□□□ -1.72
LCB5YLR260W YKL222CP35995 705 aa4.28□□□□□ -1.72
LCB5YLR260W UBX7P38349 436 aa4.28□□□□□ -1.72
LCB5YLR260W KTR7P40504 517 aa4.28□□□□□ -1.72
LCB5YLR260W YJL049WP47048 450 aa4.28□□□□□ -1.72
LCB5YLR260W ITC1P53125 1264 aa4.28□□□□□ -1.72
LCB5YLR260W ESF2P53743 316 aaKnown RBP4.28□□□□□ -1.72
LCB5YLR260W ZDS2P54786 942 aa4.28□□□□□ -1.72
LCB5YLR260W CWC15Q03772 175 aaKnown RBP4.28□□□□□ -1.72
LCB5YLR260W PIN2Q12057 282 aa4.28□□□□□ -1.72
LCB5YLR260W WRS1Q12109 432 aaKnown RBP4.28□□□□□ -1.72
LCB5YLR260W PHM7Q12252 991 aa4.28□□□□□ -1.72
LCB5YLR260W NFU1P32860 256 aa4.27□□□□□ -1.73
LCB5YLR260W ATG3P40344 310 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms