RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W SPB4P25808 606 aaPredicted RBP17.89■□□□□ 0.45
CCC1YLR220W OCT1P35999 772 aa17.89■□□□□ 0.45
CCC1YLR220W ETP1P38748 585 aaKnown RBP17.89■□□□□ 0.45
CCC1YLR220W AKR1P39010 764 aa17.89■□□□□ 0.45
CCC1YLR220W UBP10P53874 792 aaPredicted RBP17.89■□□□□ 0.45
CCC1YLR220W ISW2Q08773 1120 aa17.89■□□□□ 0.45
CCC1YLR220W TSR3Q12094 313 aaKnown RBP17.89■□□□□ 0.45
CCC1YLR220W SRP54P20424 541 aaKnown RBP17.88■□□□□ 0.45
CCC1YLR220W VPS20Q04272 221 aa17.88■□□□□ 0.45
CCC1YLR220W YOR111WQ99210 232 aa17.88■□□□□ 0.45
CCC1YLR220W RPL19AP0CX82 189 aaKnown RBP17.87■□□□□ 0.45
CCC1YLR220W RPL19BP0CX83 189 aaPredicted RBP17.87■□□□□ 0.45
CCC1YLR220W KRS1P15180 591 aaKnown RBP17.87■□□□□ 0.45
CCC1YLR220W SAM2P19358 384 aaKnown RBP17.87■□□□□ 0.45
CCC1YLR220W RNR3P21672 869 aaKnown RBP17.87■□□□□ 0.45
CCC1YLR220W UBP9P39967 754 aa17.87■□□□□ 0.45
CCC1YLR220W SOL4P53315 255 aa17.87■□□□□ 0.45
CCC1YLR220W BMH2P34730 273 aaKnown RBP17.86■□□□□ 0.45
CCC1YLR220W CTF18P49956 741 aa17.86■□□□□ 0.45
CCC1YLR220W PEX29Q03370 554 aa17.86■□□□□ 0.45
CCC1YLR220W NPA3P47122 385 aa17.85■□□□□ 0.45
CCC1YLR220W DSE3Q08729 430 aa17.85■□□□□ 0.45
CCC1YLR220W FBP1P09201 348 aa17.84■□□□□ 0.45
CCC1YLR220W TOM71P38825 639 aaKnown RBP17.84■□□□□ 0.45
CCC1YLR220W MDM1Q01846 1127 aa17.84■□□□□ 0.45
CCC1YLR220W CBP3P21560 335 aa17.83■□□□□ 0.44
CCC1YLR220W YDJ1P25491 409 aaKnown RBP17.83■□□□□ 0.44
CCC1YLR220W LYS14P40971 790 aa17.83■□□□□ 0.44
CCC1YLR220W EPL1P43572 832 aa17.83■□□□□ 0.44
CCC1YLR220W NET1P47035 1189 aa17.83■□□□□ 0.44
CCC1YLR220W CST9Q06032 482 aa17.83■□□□□ 0.44
CCC1YLR220W YPL150WQ12152 901 aa17.83■□□□□ 0.44
CCC1YLR220W SWI4P25302 1093 aaKnown RBP17.82■□□□□ 0.44
CCC1YLR220W PER1P25625 357 aa17.82■□□□□ 0.44
CCC1YLR220W VPS45P38932 577 aa17.82■□□□□ 0.44
CCC1YLR220W RBA50Q04418 439 aa17.82■□□□□ 0.44
CCC1YLR220W ELG1Q12050 791 aa17.82■□□□□ 0.44
CCC1YLR220W LSP1Q12230 341 aaKnown RBP17.82■□□□□ 0.44
CCC1YLR220W TTI1P36097 1038 aa17.81■□□□□ 0.44
CCC1YLR220W VAB2P40003 282 aa17.81■□□□□ 0.44
CCC1YLR220W YJL007CP47080 104 aa17.81■□□□□ 0.44
CCC1YLR220W YML037CQ03703 340 aa17.8■□□□□ 0.44
CCC1YLR220W RXT2P38255 430 aa17.79■□□□□ 0.44
CCC1YLR220W MOT2P34909 587 aaKnown RBP17.78■□□□□ 0.44
CCC1YLR220W APE3P37302 537 aaKnown RBP17.78■□□□□ 0.44
CCC1YLR220W RPN10P38886 268 aaKnown RBP17.78■□□□□ 0.44
CCC1YLR220W PCI8P40512 444 aa17.78■□□□□ 0.44
CCC1YLR220W BUD6P41697 788 aa17.78■□□□□ 0.44
CCC1YLR220W YDR341CQ05506 607 aaKnown RBP17.78■□□□□ 0.44
CCC1YLR220W GDE1Q02979 1223 aa17.77■□□□□ 0.44
CCC1YLR220W UBX5Q06682 500 aa17.77■□□□□ 0.44
CCC1YLR220W MET6P05694 767 aaKnown RBP17.76■□□□□ 0.43
CCC1YLR220W DIT2P21595 489 aa17.76■□□□□ 0.43
CCC1YLR220W SEC20P28791 383 aa17.76■□□□□ 0.43
CCC1YLR220W CPA2P03965 1118 aaKnown RBP17.75■□□□□ 0.43
CCC1YLR220W RAD18P10862 487 aa17.75■□□□□ 0.43
CCC1YLR220W HCA4P20448 770 aaKnown RBP17.75■□□□□ 0.43
CCC1YLR220W UTP4Q06679 776 aaKnown RBP17.75■□□□□ 0.43
CCC1YLR220W BIK1P11709 440 aa17.74■□□□□ 0.43
CCC1YLR220W LSB1P53281 241 aa17.74■□□□□ 0.43
CCC1YLR220W HRQ1Q05549 1077 aa17.74■□□□□ 0.43
CCC1YLR220W CFT2Q12102 859 aaPredicted RBP17.74■□□□□ 0.43
CCC1YLR220W TIF6Q12522 245 aaKnown RBP17.74■□□□□ 0.43
CCC1YLR220W MYO1P08964 1928 aa17.73■□□□□ 0.43
CCC1YLR220W ASF1P32447 279 aa17.73■□□□□ 0.43
CCC1YLR220W PHO88P38264 188 aaPredicted RBP17.73■□□□□ 0.43
CCC1YLR220W RSC30P38781 883 aa17.73■□□□□ 0.43
CCC1YLR220W CCT3P39077 534 aaKnown RBP17.73■□□□□ 0.43
CCC1YLR220W ENT3P47160 408 aa17.73■□□□□ 0.43
CCC1YLR220W YGL138CP53122 345 aa17.73■□□□□ 0.43
CCC1YLR220W SUE1Q06524 206 aa17.73■□□□□ 0.43
CCC1YLR220W CIT1P00890 479 aa17.72■□□□□ 0.43
CCC1YLR220W CDC6P09119 513 aa17.72■□□□□ 0.43
CCC1YLR220W PRX1P34227 261 aaKnown RBP17.72■□□□□ 0.43
CCC1YLR220W STI1P15705 589 aaKnown RBP RIP-Chip data17.71■□□□□ 0.43not detected
CCC1YLR220W ASH1P34233 588 aa17.71■□□□□ 0.43
CCC1YLR220W MCD4P36051 919 aa17.71■□□□□ 0.43
CCC1YLR220W VPS24P36095 224 aaKnown RBP17.71■□□□□ 0.43
CCC1YLR220W RFC5P38251 354 aa17.71■□□□□ 0.43
CCC1YLR220W ALD6P54115 500 aaKnown RBP17.71■□□□□ 0.43
CCC1YLR220W JIP4Q03361 876 aa17.71■□□□□ 0.43
CCC1YLR220W CEX1Q12453 761 aa17.71■□□□□ 0.43
CCC1YLR220W IME2P32581 645 aa17.7■□□□□ 0.42
CCC1YLR220W MAL33P38157 468 aa17.7■□□□□ 0.42
CCC1YLR220W BDH2P39713 417 aa17.7■□□□□ 0.42
CCC1YLR220W TPM2P40414 161 aa17.7■□□□□ 0.42
CCC1YLR220W ASE1P50275 885 aa17.7■□□□□ 0.42
CCC1YLR220W VIP1Q06685 1146 aaKnown RBP17.7■□□□□ 0.42
CCC1YLR220W PGI1P12709 554 aaKnown RBP17.69■□□□□ 0.42
CCC1YLR220W RPL8AP17076 256 aaKnown RBP17.69■□□□□ 0.42
CCC1YLR220W VPS1P21576 704 aaKnown RBP17.69■□□□□ 0.42
CCC1YLR220W IXR1P33417 597 aa17.69■□□□□ 0.42
CCC1YLR220W TGL1P34163 548 aa17.69■□□□□ 0.42
CCC1YLR220W SPR3P41901 512 aa17.69■□□□□ 0.42
CCC1YLR220W DUS1P53759 423 aaKnown RBP17.69■□□□□ 0.42
CCC1YLR220W DCS2Q12123 353 aa17.69■□□□□ 0.42
CCC1YLR220W HSP82P02829 709 aaKnown RBP17.68■□□□□ 0.42
CCC1YLR220W ERG7P38604 731 aa17.68■□□□□ 0.42
CCC1YLR220W HYR1P40581 163 aaKnown RBP17.68■□□□□ 0.42
CCC1YLR220W TMA64Q04600 565 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms