RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C SWI4P25302 1093 aaKnown RBP11.37□□□□□ -0.59
POM34YLR018C TPS3P38426 1054 aaKnown RBP11.37□□□□□ -0.59
POM34YLR018C VHR2P40041 505 aa11.37□□□□□ -0.59
POM34YLR018C SNU71P53207 620 aaKnown RBP11.37□□□□□ -0.59
POM34YLR018C FOL1P53848 824 aa11.37□□□□□ -0.59
POM34YLR018C ISW2Q08773 1120 aa11.37□□□□□ -0.59
POM34YLR018C YPL150WQ12152 901 aa11.37□□□□□ -0.59
POM34YLR018C HSP82P02829 709 aaKnown RBP11.36□□□□□ -0.59
POM34YLR018C GAL2P13181 574 aa11.36□□□□□ -0.59
POM34YLR018C MSP1P28737 362 aa11.36□□□□□ -0.59
POM34YLR018C BMH2P34730 273 aaKnown RBP11.36□□□□□ -0.59
POM34YLR018C PEA2P40091 420 aa11.36□□□□□ -0.59
POM34YLR018C VPS30Q02948 557 aa11.36□□□□□ -0.59
POM34YLR018C CWC15Q03772 175 aaKnown RBP11.36□□□□□ -0.59
POM34YLR018C CSR2Q12734 1121 aa11.36□□□□□ -0.59
POM34YLR018C NUC1P08466 329 aa11.35□□□□□ -0.59
POM34YLR018C SAM2P19358 384 aaKnown RBP11.35□□□□□ -0.59
POM34YLR018C DIT2P21595 489 aa11.35□□□□□ -0.59
POM34YLR018C RNR3P21672 869 aaKnown RBP11.35□□□□□ -0.59
POM34YLR018C HST1P53685 503 aa11.35□□□□□ -0.59
POM34YLR018C GSC2P40989 1895 aa11.34□□□□□ -0.59
POM34YLR018C RDS1P25611 832 aa11.34□□□□□ -0.59
POM34YLR018C MAL33P38157 468 aa11.34□□□□□ -0.59
POM34YLR018C PNT1P38969 423 aa11.34□□□□□ -0.59
POM34YLR018C ACA1P39970 489 aa11.34□□□□□ -0.59
POM34YLR018C YDR341CQ05506 607 aaKnown RBP11.34□□□□□ -0.59
POM34YLR018C MET6P05694 767 aaKnown RBP11.33□□□□□ -0.6
POM34YLR018C KRS1P15180 591 aaKnown RBP11.33□□□□□ -0.6
POM34YLR018C CBP3P21560 335 aa11.33□□□□□ -0.6
POM34YLR018C PCI8P40512 444 aa11.33□□□□□ -0.6
POM34YLR018C PEX21P50091 288 aa11.33□□□□□ -0.6
POM34YLR018C MDM1Q01846 1127 aa11.33□□□□□ -0.6
POM34YLR018C COG8Q04632 607 aa11.33□□□□□ -0.6
POM34YLR018C PEX19Q07418 342 aa11.33□□□□□ -0.6
POM34YLR018C CLF1Q12309 687 aaPredicted RBP11.33□□□□□ -0.6
POM34YLR018C SRP54P20424 541 aaKnown RBP11.32□□□□□ -0.6
POM34YLR018C VPS1P21576 704 aaKnown RBP11.32□□□□□ -0.6
POM34YLR018C MBR1P23493 339 aa11.32□□□□□ -0.6
POM34YLR018C SPB4P25808 606 aaPredicted RBP11.32□□□□□ -0.6
POM34YLR018C RXT2P38255 430 aa11.32□□□□□ -0.6
POM34YLR018C VPS45P38932 577 aa11.32□□□□□ -0.6
POM34YLR018C UBP9P39967 754 aa11.32□□□□□ -0.6
POM34YLR018C PIL1P53252 339 aaKnown RBP11.32□□□□□ -0.6
POM34YLR018C HAP5Q02516 242 aa11.32□□□□□ -0.6
POM34YLR018C GDE1Q02979 1223 aa11.32□□□□□ -0.6
POM34YLR018C DSE3Q08729 430 aa11.32□□□□□ -0.6
POM34YLR018C TUS1Q06412 1307 aa11.32□□□□□ -0.6
POM34YLR018C CIT1P00890 479 aa11.31□□□□□ -0.6
POM34YLR018C CDC6P09119 513 aa11.31□□□□□ -0.6
POM34YLR018C STI1P15705 589 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
POM34YLR018C ROX1P25042 368 aa11.31□□□□□ -0.6
POM34YLR018C PES4P39684 611 aa11.31□□□□□ -0.6
POM34YLR018C PEX29Q03370 554 aa11.31□□□□□ -0.6
POM34YLR018C SSA4P22202 642 aaKnown RBP11.3□□□□□ -0.6
POM34YLR018C TIF4631P39935 952 aaKnown RBP11.3□□□□□ -0.6
POM34YLR018C HYR1P40581 163 aaKnown RBP11.3□□□□□ -0.6
POM34YLR018C CIR1P42940 261 aa11.3□□□□□ -0.6
POM34YLR018C GIS4Q04233 774 aa11.3□□□□□ -0.6
POM34YLR018C ERG12P07277 443 aa11.29□□□□□ -0.6
POM34YLR018C TOM71P38825 639 aaKnown RBP11.29□□□□□ -0.6
POM34YLR018C SNF7P39929 240 aaKnown RBP11.29□□□□□ -0.6
POM34YLR018C SUE1Q06524 206 aa11.29□□□□□ -0.6
POM34YLR018C DCS2Q12123 353 aa11.29□□□□□ -0.6
POM34YLR018C GIN4Q12263 1142 aa11.29□□□□□ -0.6
POM34YLR018C PGI1P12709 554 aaKnown RBP11.28□□□□□ -0.6
POM34YLR018C ARL1P38116 183 aaKnown RBP11.28□□□□□ -0.6
POM34YLR018C YIL089WP40500 205 aa11.28□□□□□ -0.6
POM34YLR018C APC11Q12157 165 aa11.28□□□□□ -0.6
POM34YLR018C KEX1P09620 729 aa11.27□□□□□ -0.61
POM34YLR018C SMD2Q06217 110 aaKnown RBP11.27□□□□□ -0.61
POM34YLR018C GET3Q12154 354 aaKnown RBP11.27□□□□□ -0.61
POM34YLR018C FRS2P15625 503 aaKnown RBP11.26□□□□□ -0.61
POM34YLR018C CCT5P40413 562 aaKnown RBP11.26□□□□□ -0.61
POM34YLR018C ASE1P50275 885 aa11.26□□□□□ -0.61
POM34YLR018C RRT6P53117 311 aaPredicted RBP11.26□□□□□ -0.61
POM34YLR018C SOL4P53315 255 aa11.26□□□□□ -0.61
POM34YLR018C CSC1Q06538 782 aa11.26□□□□□ -0.61
POM34YLR018C FBP1P09201 348 aa11.25□□□□□ -0.61
POM34YLR018C RGP1P16664 663 aa11.25□□□□□ -0.61
POM34YLR018C ELM1P32801 640 aa11.25□□□□□ -0.61
POM34YLR018C YGL138CP53122 345 aa11.25□□□□□ -0.61
POM34YLR018C LSB1P53281 241 aa11.25□□□□□ -0.61
POM34YLR018C NAF1P53919 492 aaKnown RBP11.25□□□□□ -0.61
POM34YLR018C UTP4Q06679 776 aaKnown RBP11.25□□□□□ -0.61
POM34YLR018C SUB2Q07478 446 aaKnown RBP11.25□□□□□ -0.61
POM34YLR018C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
POM34YLR018C CEX1Q12453 761 aa11.25□□□□□ -0.61
POM34YLR018C NBL1Q3E7Y6 73 aa11.25□□□□□ -0.61
POM34YLR018C HXK1P04806 485 aaKnown RBP11.24□□□□□ -0.61
POM34YLR018C MAK11P20484 414 aaKnown RBP11.24□□□□□ -0.61
POM34YLR018C DID4P36108 232 aa11.24□□□□□ -0.61
POM34YLR018C CCT3P39077 534 aaKnown RBP11.24□□□□□ -0.61
POM34YLR018C RVS167P39743 482 aaKnown RBP11.24□□□□□ -0.61
POM34YLR018C TPM2P40414 161 aa11.24□□□□□ -0.61
POM34YLR018C RSM25P40496 264 aa11.24□□□□□ -0.61
POM34YLR018C EIS1Q05050 843 aaKnown RBP11.24□□□□□ -0.61
POM34YLR018C RPL8AP17076 256 aaKnown RBP11.23□□□□□ -0.61
POM34YLR018C ASF1P32447 279 aa11.23□□□□□ -0.61
POM34YLR018C OCT1P35999 772 aa11.23□□□□□ -0.61
POM34YLR018C LYS14P40971 790 aa11.23□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 126.9 ms