RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C YNR065CP53751 1116 aa5.27□□□□□ -1.57
SRP40YKR092C ALO1P54783 526 aaKnown RBP5.27□□□□□ -1.57
SRP40YKR092C IOC4Q04213 475 aa5.27□□□□□ -1.57
SRP40YKR092C SPR28Q04921 423 aa5.27□□□□□ -1.57
SRP40YKR092C CMR1Q12510 522 aaKnown RBP5.27□□□□□ -1.57
SRP40YKR092C PRP5P21372 849 aaPredicted RBP5.26□□□□□ -1.57
SRP40YKR092C PEP7P32609 515 aa5.26□□□□□ -1.57
SRP40YKR092C FAA3P39002 694 aa5.26□□□□□ -1.57
SRP40YKR092C GIP2P40036 548 aa5.26□□□□□ -1.57
SRP40YKR092C LEM3P42838 414 aa5.26□□□□□ -1.57
SRP40YKR092C NOP7P53261 605 aaKnown RBP5.26□□□□□ -1.57
SRP40YKR092C YAF9P53930 226 aa5.26□□□□□ -1.57
SRP40YKR092C TOP1P04786 769 aa5.25□□□□□ -1.57
SRP40YKR092C HVG1P0CE11 249 aa5.25□□□□□ -1.57
SRP40YKR092C CYC8P14922 966 aa5.25□□□□□ -1.57
SRP40YKR092C SAC7P17121 654 aa5.25□□□□□ -1.57
SRP40YKR092C UGA4P32837 571 aa5.25□□□□□ -1.57
SRP40YKR092C NEO1P40527 1151 aa5.25□□□□□ -1.57
SRP40YKR092C FET4P40988 552 aa5.25□□□□□ -1.57
SRP40YKR092C MRPS18P42847 217 aa5.25□□□□□ -1.57
SRP40YKR092C ULP1Q02724 621 aa5.25□□□□□ -1.57
SRP40YKR092C SLP1Q12232 587 aa5.25□□□□□ -1.57
SRP40YKR092C RAD2P07276 1031 aa5.24□□□□□ -1.57
SRP40YKR092C PAM1P37304 830 aaKnown RBP5.24□□□□□ -1.57
SRP40YKR092C PGM1P33401 570 aaKnown RBP5.23□□□□□ -1.57
SRP40YKR092C TED1P40533 473 aa5.23□□□□□ -1.57
SRP40YKR092C ARI1P53111 347 aaKnown RBP5.23□□□□□ -1.57
SRP40YKR092C YPL109CQ02981 657 aa5.23□□□□□ -1.57
SRP40YKR092C ADI1Q03677 179 aa5.23□□□□□ -1.57
SRP40YKR092C SVF1Q05515 481 aa5.23□□□□□ -1.57
SRP40YKR092C MCD1Q12158 566 aa5.23□□□□□ -1.57
SRP40YKR092C TCB3Q03640 1545 aaKnown RBP5.23□□□□□ -1.57
SRP40YKR092C PRE9P23638 258 aaKnown RBP5.22□□□□□ -1.57
SRP40YKR092C SFA1P32771 386 aa5.22□□□□□ -1.57
SRP40YKR092C SQT1P35184 431 aa5.22□□□□□ -1.57
SRP40YKR092C OMA1P36163 345 aa5.22□□□□□ -1.57
SRP40YKR092C PAN5P38787 379 aa5.22□□□□□ -1.57
SRP40YKR092C KRI1P42846 591 aaKnown RBP5.22□□□□□ -1.57
SRP40YKR092C RSM26P47141 266 aa5.22□□□□□ -1.57
SRP40YKR092C RMD1Q03441 430 aa5.22□□□□□ -1.57
SRP40YKR092C HAS1Q03532 505 aaKnown RBP5.22□□□□□ -1.57
SRP40YKR092C SPO71Q03868 1245 aa5.22□□□□□ -1.57
SRP40YKR092C ESF1Q06344 628 aaKnown RBP5.22□□□□□ -1.57
SRP40YKR092C TY4B-PA0A0B7P3V8 1104 aa5.21□□□□□ -1.58
SRP40YKR092C SHU2P38957 223 aa5.21□□□□□ -1.58
SRP40YKR092C MET10P39692 1035 aa5.21□□□□□ -1.58
SRP40YKR092C PEX13P80667 386 aa5.21□□□□□ -1.58
SRP40YKR092C TY4A-HQ6Q5P6 413 aa5.21□□□□□ -1.58
SRP40YKR092C HTS1P07263 546 aaKnown RBP5.2□□□□□ -1.58
SRP40YKR092C YKL077WP36081 392 aa5.2□□□□□ -1.58
SRP40YKR092C INP52P50942 1183 aa5.2□□□□□ -1.58
SRP40YKR092C NOG1Q02892 647 aaKnown RBP5.2□□□□□ -1.58
SRP40YKR092C JIP5Q06214 492 aaPredicted RBP5.2□□□□□ -1.58
SRP40YKR092C MSH3P25336 1018 aa5.19□□□□□ -1.58
SRP40YKR092C PEX28P38848 579 aa5.19□□□□□ -1.58
SRP40YKR092C PIC2P40035 300 aa5.19□□□□□ -1.58
SRP40YKR092C UTP22P53254 1237 aaPredicted RBP5.19□□□□□ -1.58
SRP40YKR092C COQ2P32378 372 aa5.18□□□□□ -1.58
SRP40YKR092C POL5P39985 1022 aaKnown RBP5.18□□□□□ -1.58
SRP40YKR092C DSE4P53753 1117 aa5.18□□□□□ -1.58
SRP40YKR092C YIG1Q08956 461 aa5.18□□□□□ -1.58
SRP40YKR092C TY1A-NL1Q12391 440 aaKnown RBP5.18□□□□□ -1.58
SRP40YKR092C SKI3P17883 1432 aaKnown RBP5.17□□□□□ -1.58
SRP40YKR092C RSC6P25632 483 aa5.17□□□□□ -1.58
SRP40YKR092C MAE1P36013 669 aaKnown RBP5.17□□□□□ -1.58
SRP40YKR092C EXO5P38289 585 aa5.17□□□□□ -1.58
SRP40YKR092C GCV1P48015 400 aa5.17□□□□□ -1.58
SRP40YKR092C FAR11P53917 953 aa5.17□□□□□ -1.58
SRP40YKR092C ELG1Q12050 791 aa5.17□□□□□ -1.58
SRP40YKR092C TRP3P00937 484 aa5.16□□□□□ -1.58
SRP40YKR092C PET112P33893 541 aa5.16□□□□□ -1.58
SRP40YKR092C MNR2P35724 969 aa5.16□□□□□ -1.58
SRP40YKR092C YGL140CP53120 1219 aa5.16□□□□□ -1.58
SRP40YKR092C YMR074CQ04773 145 aa5.16□□□□□ -1.58
SRP40YKR092C YLL054CQ12244 843 aa5.16□□□□□ -1.58
SRP40YKR092C YLR122CQ12312 125 aa5.16□□□□□ -1.58
SRP40YKR092C TY1A-LR4P0C2I8 440 aaKnown RBP5.15□□□□□ -1.59
SRP40YKR092C TY1A-DR6P0CX70 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-ER1P0CX71 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-LR2P0CX72 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-PLP0CX73 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-JR1P0CX74 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-LR3P0CX75 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-ML2P0CX76 440 aa5.15□□□□□ -1.59
SRP40YKR092C VMA4P22203 233 aaKnown RBP5.15□□□□□ -1.59
SRP40YKR092C KAE1P36132 386 aa5.15□□□□□ -1.59
SRP40YKR092C YKR073CP36153 106 aa5.15□□□□□ -1.59
SRP40YKR092C MAD1P40957 749 aa5.15□□□□□ -1.59
SRP40YKR092C XKS1P42826 600 aa5.15□□□□□ -1.59
SRP40YKR092C SLS1P42900 643 aa5.15□□□□□ -1.59
SRP40YKR092C MEC3Q02574 474 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-GR1Q12085 440 aa5.15□□□□□ -1.59
SRP40YKR092C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.15□□□□□ -1.59
SRP40YKR092C TY1A-OLQ92392 440 aaKnown RBP5.15□□□□□ -1.59
SRP40YKR092C GCR1P07261 785 aa5.14□□□□□ -1.59
SRP40YKR092C ARL1P38116 183 aaKnown RBP5.14□□□□□ -1.59
SRP40YKR092C REI1P38344 393 aaPredicted RBP5.14□□□□□ -1.59
SRP40YKR092C NOP2P40991 618 aaKnown RBP5.14□□□□□ -1.59
SRP40YKR092C MTR4P47047 1073 aaKnown RBP5.14□□□□□ -1.59
SRP40YKR092C SEC23P15303 768 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms