RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W ENP1P38333 483 aaKnown RBP3.46□□□□□ -1.85
TRM2YKR056W GDE1Q02979 1223 aa3.46□□□□□ -1.85
TRM2YKR056W Q0182Q9ZZW1 134 aa3.46□□□□□ -1.85
TRM2YKR056W TRP3P00937 484 aa3.46□□□□□ -1.86
TRM2YKR056W CDC34P14682 295 aa3.46□□□□□ -1.86
TRM2YKR056W RAD4P14736 754 aa3.46□□□□□ -1.86
TRM2YKR056W SAC7P17121 654 aa3.46□□□□□ -1.86
TRM2YKR056W PRI2P20457 528 aa3.46□□□□□ -1.86
TRM2YKR056W COQ2P32378 372 aa3.46□□□□□ -1.86
TRM2YKR056W ELM1P32801 640 aa3.46□□□□□ -1.86
TRM2YKR056W SPF1P39986 1215 aaKnown RBP3.46□□□□□ -1.86
TRM2YKR056W SAM37P50110 327 aa3.46□□□□□ -1.86
TRM2YKR056W CWC24P53769 259 aa3.46□□□□□ -1.86
TRM2YKR056W DNM1P54861 757 aa3.46□□□□□ -1.86
TRM2YKR056W OPI10Q08202 246 aa3.46□□□□□ -1.86
TRM2YKR056W YOL057WQ08225 711 aa3.46□□□□□ -1.86
TRM2YKR056W BUD21Q08492 214 aaPredicted RBP3.46□□□□□ -1.86
TRM2YKR056W PRE9P23638 258 aaKnown RBP3.45□□□□□ -1.86
TRM2YKR056W VMA3P25515 160 aa3.45□□□□□ -1.86
TRM2YKR056W NAB2P32505 525 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
TRM2YKR056W STE5P32917 917 aa3.45□□□□□ -1.86
TRM2YKR056W KAE1P36132 386 aa3.45□□□□□ -1.86
TRM2YKR056W TYW3P53177 273 aa3.45□□□□□ -1.86
TRM2YKR056W NOC3Q07896 663 aaPredicted RBP3.45□□□□□ -1.86
TRM2YKR056W MCM1P11746 286 aa3.44□□□□□ -1.86
TRM2YKR056W MLF3P32047 452 aa3.44□□□□□ -1.86
TRM2YKR056W PIC2P40035 300 aa3.44□□□□□ -1.86
TRM2YKR056W RGD2P43556 714 aa3.44□□□□□ -1.86
TRM2YKR056W CTR9P89105 1077 aa3.44□□□□□ -1.86
TRM2YKR056W DAL4Q04895 635 aa3.44□□□□□ -1.86
TRM2YKR056W BSC2Q05611 235 aa3.44□□□□□ -1.86
TRM2YKR056W GAS5Q08193 484 aa3.44□□□□□ -1.86
TRM2YKR056W INP54Q08227 384 aaKnown RBP3.44□□□□□ -1.86
TRM2YKR056W OXR1Q08952 273 aa3.44□□□□□ -1.86
TRM2YKR056W YOR131CQ12486 218 aa3.44□□□□□ -1.86
TRM2YKR056W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
TRM2YKR056W TOS1P38288 455 aa3.44□□□□□ -1.86
TRM2YKR056W TPM2P40414 161 aa3.44□□□□□ -1.86
TRM2YKR056W HXT8P40886 569 aa3.44□□□□□ -1.86
TRM2YKR056W ARI1P53111 347 aaKnown RBP3.44□□□□□ -1.86
TRM2YKR056W GCR1P07261 785 aa3.43□□□□□ -1.86
TRM2YKR056W LEU1P07264 779 aaKnown RBP3.43□□□□□ -1.86
TRM2YKR056W ERR1P0CX10 437 aa3.43□□□□□ -1.86
TRM2YKR056W ERR2P0CX11 437 aa3.43□□□□□ -1.86
TRM2YKR056W DUR3P33413 735 aa3.43□□□□□ -1.86
TRM2YKR056W RSP5P39940 809 aaKnown RBP3.43□□□□□ -1.86
TRM2YKR056W YEN1P40028 759 aa3.43□□□□□ -1.86
TRM2YKR056W ZDS1P50111 915 aaKnown RBP3.43□□□□□ -1.86
TRM2YKR056W FLC1Q08967 793 aa3.43□□□□□ -1.86
TRM2YKR056W YGR161W-CQ3E744 92 aa3.43□□□□□ -1.86
TRM2YKR056W COBP00163 385 aa3.42□□□□□ -1.86
TRM2YKR056W PHO8P11491 566 aa3.42□□□□□ -1.86
TRM2YKR056W MSN1P22148 382 aa3.42□□□□□ -1.86
TRM2YKR056W MCM5P29496 775 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W YHL008CP38750 627 aa3.42□□□□□ -1.86
TRM2YKR056W CIC1P38779 376 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W UBP5P39944 805 aa3.42□□□□□ -1.86
TRM2YKR056W MRPS18P42847 217 aa3.42□□□□□ -1.86
TRM2YKR056W EEB1Q02891 456 aa3.42□□□□□ -1.86
TRM2YKR056W YPL109CQ02981 657 aa3.42□□□□□ -1.86
TRM2YKR056W YCS4Q06156 1176 aa3.42□□□□□ -1.86
TRM2YKR056W TDA5Q06417 326 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W TIF6Q12522 245 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W FLP1P03870 423 aa3.42□□□□□ -1.86
TRM2YKR056W PUB1P32588 453 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
TRM2YKR056W SMC1P32908 1225 aa3.42□□□□□ -1.86
TRM2YKR056W PRP40P33203 583 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W RRM3P38766 723 aa3.42□□□□□ -1.86
TRM2YKR056W CHZ1P40019 153 aaPredicted RBP3.42□□□□□ -1.86
TRM2YKR056W NTA1P40354 457 aa3.42□□□□□ -1.86
TRM2YKR056W TIM54P47045 478 aa3.42□□□□□ -1.86
TRM2YKR056W CTH1P47976 325 aa3.42□□□□□ -1.86
TRM2YKR056W YGL081WP53156 320 aa3.42□□□□□ -1.86
TRM2YKR056W YNR029CP53729 429 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W SUB1P54000 292 aaKnown RBP3.42□□□□□ -1.86
TRM2YKR056W MCD1Q12158 566 aa3.42□□□□□ -1.86
TRM2YKR056W RGP1P16664 663 aa3.41□□□□□ -1.86
TRM2YKR056W GNP1P48813 663 aa3.41□□□□□ -1.86
TRM2YKR056W ULP1Q02724 621 aa3.41□□□□□ -1.86
TRM2YKR056W NAN1Q02931 896 aaKnown RBP3.41□□□□□ -1.86
TRM2YKR056W YLR122CQ12312 125 aa3.41□□□□□ -1.86
TRM2YKR056W NAR1P23503 491 aaKnown RBP3.4□□□□□ -1.86
TRM2YKR056W YBR184WP38299 523 aa3.4□□□□□ -1.86
TRM2YKR056W RAD55P38953 406 aa3.4□□□□□ -1.86
TRM2YKR056W MSH4P40965 878 aaPredicted RBP3.4□□□□□ -1.86
TRM2YKR056W FOL1P53848 824 aa3.4□□□□□ -1.86
TRM2YKR056W VPS72Q03388 795 aa3.4□□□□□ -1.86
TRM2YKR056W UTP14Q04500 899 aaKnown RBP3.4□□□□□ -1.86
TRM2YKR056W URN1Q06525 465 aaKnown RBP3.4□□□□□ -1.86
TRM2YKR056W BRE4Q07660 1125 aa3.4□□□□□ -1.86
TRM2YKR056W NOP14Q99207 810 aaKnown RBP3.4□□□□□ -1.86
TRM2YKR056W CAN1P04817 590 aa3.4□□□□□ -1.87
TRM2YKR056W HEM13P11353 328 aaKnown RBP3.4□□□□□ -1.87
TRM2YKR056W RPL8AP17076 256 aaKnown RBP3.4□□□□□ -1.87
TRM2YKR056W SFA1P32771 386 aa3.4□□□□□ -1.87
TRM2YKR056W SCD5P34758 872 aa3.4□□□□□ -1.87
TRM2YKR056W CRP1P38845 465 aaKnown RBP3.4□□□□□ -1.87
TRM2YKR056W PSY2P40164 858 aa3.4□□□□□ -1.87
TRM2YKR056W QDR2P40474 542 aa3.4□□□□□ -1.87
TRM2YKR056W HEH2Q03281 663 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms