RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C UTP22P53254 1237 aaPredicted RBP5.6□□□□□ -1.51
YPT52YKR014C YIG1Q08956 461 aa5.6□□□□□ -1.51
YPT52YKR014C KIP3P53086 805 aaKnown RBP5.59□□□□□ -1.51
YPT52YKR014C DAL4Q04895 635 aa5.59□□□□□ -1.51
YPT52YKR014C ERS1P17261 260 aa5.58□□□□□ -1.52
YPT52YKR014C ASF1P32447 279 aa5.58□□□□□ -1.52
YPT52YKR014C PRP40P33203 583 aaKnown RBP5.58□□□□□ -1.52
YPT52YKR014C RPT1P33299 467 aaKnown RBP5.58□□□□□ -1.52
YPT52YKR014C YOR223WQ12015 292 aa5.58□□□□□ -1.52
YPT52YKR014C SQT1P35184 431 aa5.57□□□□□ -1.52
YPT52YKR014C POL32P47110 350 aa5.57□□□□□ -1.52
YPT52YKR014C MEC3Q02574 474 aa5.57□□□□□ -1.52
YPT52YKR014C ARL1P38116 183 aaKnown RBP5.56□□□□□ -1.52
YPT52YKR014C REI1P38344 393 aaPredicted RBP5.56□□□□□ -1.52
YPT52YKR014C RSM26P47141 266 aa5.56□□□□□ -1.52
YPT52YKR014C NCE103P53615 221 aa5.56□□□□□ -1.52
YPT52YKR014C REC8Q12188 680 aa5.56□□□□□ -1.52
YPT52YKR014C CHS2P14180 963 aa5.55□□□□□ -1.52
YPT52YKR014C KAE1P36132 386 aa5.55□□□□□ -1.52
YPT52YKR014C ATG14P38270 344 aa5.55□□□□□ -1.52
YPT52YKR014C SAF1P38352 637 aa5.55□□□□□ -1.52
YPT52YKR014C AKR1P39010 764 aa5.55□□□□□ -1.52
YPT52YKR014C GIC2Q06648 383 aa5.55□□□□□ -1.52
YPT52YKR014C PEX13P80667 386 aa5.54□□□□□ -1.52
YPT52YKR014C ULP1Q02724 621 aa5.54□□□□□ -1.52
YPT52YKR014C DOT1Q04089 582 aaKnown RBP5.54□□□□□ -1.52
YPT52YKR014C AVO1Q08236 1176 aa5.54□□□□□ -1.52
YPT52YKR014C PGM1P33401 570 aaKnown RBP5.53□□□□□ -1.52
YPT52YKR014C MTR4P47047 1073 aaKnown RBP5.53□□□□□ -1.52
YPT52YKR014C NOG1Q02892 647 aaKnown RBP5.53□□□□□ -1.52
YPT52YKR014C NAM7P30771 971 aaKnown RBP5.52□□□□□ -1.53
YPT52YKR014C ADI1Q03677 179 aa5.52□□□□□ -1.53
YPT52YKR014C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
YPT52YKR014C GLT1Q12680 2145 aaKnown RBP5.52□□□□□ -1.53
YPT52YKR014C MSH3P25336 1018 aa5.51□□□□□ -1.53
YPT52YKR014C EXO5P38289 585 aa5.51□□□□□ -1.53
YPT52YKR014C MRPS18P42847 217 aa5.51□□□□□ -1.53
YPT52YKR014C YGR122WP53272 402 aa5.51□□□□□ -1.53
YPT52YKR014C ALG6Q12001 544 aaKnown RBP5.51□□□□□ -1.53
YPT52YKR014C VMA4P22203 233 aaKnown RBP5.5□□□□□ -1.53
YPT52YKR014C PRE9P23638 258 aaKnown RBP5.5□□□□□ -1.53
YPT52YKR014C GPT2P36148 743 aa5.5□□□□□ -1.53
YPT52YKR014C MED7Q08278 222 aa5.5□□□□□ -1.53
YPT52YKR014C LAP2Q10740 671 aa5.5□□□□□ -1.53
YPT52YKR014C MCD1Q12158 566 aa5.5□□□□□ -1.53
YPT52YKR014C YLR122CQ12312 125 aa5.5□□□□□ -1.53
YPT52YKR014C NSI1Q12457 570 aa5.5□□□□□ -1.53
YPT52YKR014C HXK1P04806 485 aaKnown RBP5.49□□□□□ -1.53
YPT52YKR014C TY1A-LR4P0C2I8 440 aaKnown RBP5.49□□□□□ -1.53
YPT52YKR014C TY1A-DR6P0CX70 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-ER1P0CX71 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-LR2P0CX72 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-PLP0CX73 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-JR1P0CX74 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-LR3P0CX75 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-ML2P0CX76 440 aa5.49□□□□□ -1.53
YPT52YKR014C MSB1P21339 1137 aaKnown RBP5.49□□□□□ -1.53
YPT52YKR014C UGA4P32837 571 aa5.49□□□□□ -1.53
YPT52YKR014C HSE1P38753 452 aa5.49□□□□□ -1.53
YPT52YKR014C PEX28P38848 579 aa5.49□□□□□ -1.53
YPT52YKR014C MMM1P41800 426 aa5.49□□□□□ -1.53
YPT52YKR014C YPL109CQ02981 657 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-GR1Q12085 440 aa5.49□□□□□ -1.53
YPT52YKR014C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.49□□□□□ -1.53
YPT52YKR014C TY1A-OLQ92392 440 aaKnown RBP5.49□□□□□ -1.53
YPT52YKR014C ATE1P16639 503 aa5.48□□□□□ -1.53
YPT52YKR014C NNK1P36003 928 aa5.48□□□□□ -1.53
YPT52YKR014C FAA3P39002 694 aa5.48□□□□□ -1.53
YPT52YKR014C SLS1P42900 643 aa5.48□□□□□ -1.53
YPT52YKR014C YGR130CP53278 816 aa5.48□□□□□ -1.53
YPT52YKR014C YOR059CQ08448 450 aaKnown RBP5.48□□□□□ -1.53
YPT52YKR014C MAC1P35192 417 aa5.47□□□□□ -1.53
YPT52YKR014C RPS26AP39938 119 aaKnown RBP5.47□□□□□ -1.53
YPT52YKR014C RPS26BP39939 119 aaKnown RBP5.47□□□□□ -1.53
YPT52YKR014C CIT3P43635 486 aa5.47□□□□□ -1.53
YPT52YKR014C SPO74P45819 413 aa5.47□□□□□ -1.53
YPT52YKR014C YJR107WP47145 328 aa5.47□□□□□ -1.53
YPT52YKR014C YGR045CP53229 120 aa5.47□□□□□ -1.53
YPT52YKR014C ELA1P53861 379 aaPredicted RBP5.47□□□□□ -1.53
YPT52YKR014C ALO1P54783 526 aaKnown RBP5.47□□□□□ -1.53
YPT52YKR014C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
YPT52YKR014C RAD2P07276 1031 aa5.46□□□□□ -1.54
YPT52YKR014C RPS4AP0CX35 261 aaKnown RBP5.46□□□□□ -1.54
YPT52YKR014C RPS4BP0CX36 261 aaKnown RBP5.46□□□□□ -1.54
YPT52YKR014C OMA1P36163 345 aa5.46□□□□□ -1.54
YPT52YKR014C YAR028WP39548 234 aa5.46□□□□□ -1.54
YPT52YKR014C MSH4P40965 878 aaPredicted RBP5.46□□□□□ -1.54
YPT52YKR014C UTP5Q04177 643 aaKnown RBP5.46□□□□□ -1.54
YPT52YKR014C TOS4Q06266 489 aa5.46□□□□□ -1.54
YPT52YKR014C TAF13P11747 167 aa5.45□□□□□ -1.54
YPT52YKR014C NFS1P25374 497 aa5.45□□□□□ -1.54
YPT52YKR014C PEP7P32609 515 aa5.45□□□□□ -1.54
YPT52YKR014C SMY2P32909 740 aaKnown RBP5.45□□□□□ -1.54
YPT52YKR014C NEM1P38757 446 aa5.45□□□□□ -1.54
YPT52YKR014C XKS1P42826 600 aa5.45□□□□□ -1.54
YPT52YKR014C YGL140CP53120 1219 aa5.45□□□□□ -1.54
YPT52YKR014C CYC7P00045 113 aa5.44□□□□□ -1.54
YPT52YKR014C CYC8P14922 966 aa5.44□□□□□ -1.54
YPT52YKR014C SEC8P32855 1065 aa5.44□□□□□ -1.54
YPT52YKR014C ADD66P36040 267 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms