RNA–Protein interactions for RNA: YKR005C

YKR005C, Transcript of Putative protein of unknown function, yeast

Gene YKR005C, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKR005C	YKR005C	TFC6	Q06339	672 aa		11.42	□□□□□ -0.58
YKR005C	YKR005C	IMH1	Q06704	911 aa	Known RBP	11.42	□□□□□ -0.58
YKR005C	YKR005C	SEC65	P29478	273 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	CCC2	P38995	1004 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	CCT4	P39078	528 aa	Known RBP	11.41	□□□□□ -0.58
YKR005C	YKR005C	DOT5	P40553	215 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	ALD2	P47771	506 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	RPS15	Q01855	142 aa	Known RBP	11.41	□□□□□ -0.58
YKR005C	YKR005C	ATG9	Q12142	997 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	YOL098C	Q12496	1037 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	NBL1	Q3E7Y6	73 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	CHO2	P05374	869 aa	Known RBP	11.41	□□□□□ -0.58
YKR005C	YKR005C	YGL140C	P53120	1219 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	GDE1	Q02979	1223 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	MMR1	Q06324	491 aa		11.41	□□□□□ -0.58
YKR005C	YKR005C	CYB2	P00175	591 aa		11.4	□□□□□ -0.58
YKR005C	YKR005C	SEC23	P15303	768 aa	Known RBP	11.4	□□□□□ -0.58
YKR005C	YKR005C	RPO26	P20435	155 aa		11.4	□□□□□ -0.58
YKR005C	YKR005C	YET1	P35723	206 aa		11.4	□□□□□ -0.58
YKR005C	YKR005C	EFM2	P38347	419 aa		11.4	□□□□□ -0.58
YKR005C	YKR005C	FYV8	P46949	817 aa	Known RBP	11.4	□□□□□ -0.58
YKR005C	YKR005C	PTC5	Q12511	572 aa		11.4	□□□□□ -0.58
YKR005C	YKR005C	CDC37	P06101	506 aa	Known RBP	11.39	□□□□□ -0.59
YKR005C	YKR005C	RXT2	P38255	430 aa		11.39	□□□□□ -0.59
YKR005C	YKR005C	SPT8	P38915	602 aa		11.39	□□□□□ -0.59
YKR005C	YKR005C	NUG1	P40010	520 aa	Known RBP	11.39	□□□□□ -0.59
YKR005C	YKR005C	HDA1	P53973	706 aa		11.39	□□□□□ -0.59
YKR005C	YKR005C	GYL1	Q04322	720 aa		11.39	□□□□□ -0.59
YKR005C	YKR005C	INM2	Q05533	292 aa		11.39	□□□□□ -0.59
YKR005C	YKR005C	THI3	Q07471	609 aa		11.39	□□□□□ -0.59
YKR005C	YKR005C	MAL31	P38156	614 aa		11.38	□□□□□ -0.59
YKR005C	YKR005C	CTM1	P38818	585 aa		11.38	□□□□□ -0.59
YKR005C	YKR005C	YIR042C	P40586	236 aa		11.38	□□□□□ -0.59
YKR005C	YKR005C	APP1	P53933	587 aa		11.38	□□□□□ -0.59
YKR005C	YKR005C	HMI1	Q12039	706 aa		11.38	□□□□□ -0.59
YKR005C	YKR005C	SPT21	P35209	758 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	SHM1	P37292	490 aa	Predicted RBP	11.37	□□□□□ -0.59
YKR005C	YKR005C	PTK2	P47116	818 aa	Known RBP	11.37	□□□□□ -0.59
YKR005C	YKR005C	BOP3	P53958	396 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	EIS1	Q05050	843 aa	Known RBP	11.37	□□□□□ -0.59
YKR005C	YKR005C	ATG23	Q06671	453 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	SPO11	P23179	398 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	ANP1	P32629	500 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	MCX1	P38323	520 aa	Predicted RBP	11.37	□□□□□ -0.59
YKR005C	YKR005C	BCD1	P38772	366 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	BUD16	P39988	312 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	PCI8	P40512	444 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	YGR237C	P50089	785 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	ERG5	P54781	538 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	VAC14	Q06708	880 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	GRE2	Q12068	342 aa	Known RBP	11.37	□□□□□ -0.59
YKR005C	YKR005C	CEX1	Q12453	761 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	YOL087C	Q99247	1116 aa		11.37	□□□□□ -0.59
YKR005C	YKR005C	HIS4	P00815	799 aa	Known RBP	11.36	□□□□□ -0.59
YKR005C	YKR005C	RPS6A	P0CX37	236 aa	Known RBP	11.36	□□□□□ -0.59
YKR005C	YKR005C	RPS6B	P0CX38	236 aa	Predicted RBP	11.36	□□□□□ -0.59
YKR005C	YKR005C	MGM1	P32266	881 aa		11.36	□□□□□ -0.59
YKR005C	YKR005C	GDT1	P38301	280 aa	Predicted RBP	11.36	□□□□□ -0.59
YKR005C	YKR005C	NAF1	P53919	492 aa	Known RBP	11.36	□□□□□ -0.59
YKR005C	YKR005C	LAM6	Q08001	693 aa		11.36	□□□□□ -0.59
YKR005C	YKR005C	HIR1	P32479	840 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	MYO3	P36006	1272 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	MUD2	P36084	527 aa	Known RBP	11.35	□□□□□ -0.59
YKR005C	YKR005C	CTK3	P46963	296 aa	Predicted RBP	11.35	□□□□□ -0.59
YKR005C	YKR005C	RTC4	P53850	401 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	YMR102C	Q03177	834 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	EBS1	Q03466	884 aa	Known RBP	11.35	□□□□□ -0.59
YKR005C	YKR005C	PSR2	Q07949	397 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	YOR296W	Q08748	1289 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	OSH2	Q12451	1283 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	YOR111W	Q99210	232 aa		11.35	□□□□□ -0.59
YKR005C	YKR005C	ALG1	P16661	449 aa		11.34	□□□□□ -0.59
YKR005C	YKR005C	RNR3	P21672	869 aa	Known RBP	11.34	□□□□□ -0.59
YKR005C	YKR005C	ATG3	P40344	310 aa		11.34	□□□□□ -0.59
YKR005C	YKR005C	ALG2	P43636	503 aa		11.34	□□□□□ -0.59
YKR005C	YKR005C	RRP6	Q12149	733 aa	Known RBP	11.34	□□□□□ -0.59
YKR005C	YKR005C	MTF2	P10849	440 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	RPT3	P33298	428 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	BYE1	P36106	594 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	ECM1	P39715	212 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	SHQ1	P40486	507 aa	Predicted RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	EFM4	P40516	257 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	YLR287C	Q05881	355 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	OMS1	Q06668	471 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	TIP41	Q12199	356 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	DPH6	Q12429	685 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	MAK31	P23059	88 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	BOI1	P38041	980 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	MED8	P38304	223 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	MIP6	P38760	659 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	LYS14	P40971	790 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	LSC2	P53312	427 aa		11.33	□□□□□ -0.6
YKR005C	YKR005C	RAT1	Q02792	1006 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	UTP5	Q04177	643 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	MRD1	Q06106	887 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	YAH1	Q12184	172 aa	Known RBP	11.33	□□□□□ -0.6
YKR005C	YKR005C	FIG2	P25653	1609 aa		11.32	□□□□□ -0.6
YKR005C	YKR005C	RTS1	P38903	757 aa		11.32	□□□□□ -0.6
YKR005C	YKR005C	CSM2	P40465	213 aa		11.32	□□□□□ -0.6
YKR005C	YKR005C	HUL4	P40985	892 aa		11.32	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms