RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	ALO1	P54783	526 aa	Known RBP	4.46	□□□□□ -1.69
SPE1	YKL184W	MED7	Q08278	222 aa		4.46	□□□□□ -1.69
SPE1	YKL184W	KAR2	P16474	682 aa	Known RBP	4.46	□□□□□ -1.7
SPE1	YKL184W	NAM7	P30771	971 aa	Known RBP	4.46	□□□□□ -1.7
SPE1	YKL184W	OMA1	P36163	345 aa		4.46	□□□□□ -1.7
SPE1	YKL184W	SAP155	P43612	1002 aa		4.46	□□□□□ -1.7
SPE1	YKL184W	MEC3	Q02574	474 aa		4.46	□□□□□ -1.7
SPE1	YKL184W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	not detected
SPE1	YKL184W	DUR3	P33413	735 aa		4.45	□□□□□ -1.7
SPE1	YKL184W	ATG14	P38270	344 aa		4.45	□□□□□ -1.7
SPE1	YKL184W	REI1	P38344	393 aa	Predicted RBP	4.45	□□□□□ -1.7
SPE1	YKL184W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
SPE1	YKL184W	DOT1	Q04089	582 aa	Known RBP	4.45	□□□□□ -1.7
SPE1	YKL184W	YLR122C	Q12312	125 aa		4.45	□□□□□ -1.7
SPE1	YKL184W	NSI1	Q12457	570 aa		4.45	□□□□□ -1.7
SPE1	YKL184W	PHO4	P07270	312 aa	Known RBP	4.44	□□□□□ -1.7
SPE1	YKL184W	MSB1	P21339	1137 aa	Known RBP	4.44	□□□□□ -1.7
SPE1	YKL184W	YGR130C	P53278	816 aa		4.44	□□□□□ -1.7
SPE1	YKL184W	ARL1	P38116	183 aa	Known RBP	4.43	□□□□□ -1.7
SPE1	YKL184W	AVO1	Q08236	1176 aa		4.43	□□□□□ -1.7
SPE1	YKL184W	GLT1	Q12680	2145 aa	Known RBP	4.42	□□□□□ -1.7
SPE1	YKL184W	CYC7	P00045	113 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	MET4	P32389	672 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	PRP40	P33203	583 aa	Known RBP	4.42	□□□□□ -1.7
SPE1	YKL184W	SQT1	P35184	431 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	GPT2	P36148	743 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	IPL1	P38991	367 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	MMM1	P41800	426 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	DAK2	P43550	591 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	SPO74	P45819	413 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	RSM26	P47141	266 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	DAL4	Q04895	635 aa		4.42	□□□□□ -1.7
SPE1	YKL184W	YOR059C	Q08448	450 aa	Known RBP	4.42	□□□□□ -1.7
SPE1	YKL184W	LIP5	P32875	414 aa		4.41	□□□□□ -1.7
SPE1	YKL184W	MTR4	P47047	1073 aa	Known RBP	4.41	□□□□□ -1.7
SPE1	YKL184W	PEX13	P80667	386 aa		4.41	□□□□□ -1.7
SPE1	YKL184W	ALG6	Q12001	544 aa	Known RBP	4.41	□□□□□ -1.7
SPE1	YKL184W	WHI5	Q12416	295 aa		4.41	□□□□□ -1.7
SPE1	YKL184W	TRP3	P00937	484 aa		4.4	□□□□□ -1.7
SPE1	YKL184W	RPT1	P33299	467 aa	Known RBP	4.4	□□□□□ -1.7
SPE1	YKL184W	TOS1	P38288	455 aa		4.4	□□□□□ -1.7
SPE1	YKL184W	MGE1	P38523	228 aa		4.4	□□□□□ -1.7
SPE1	YKL184W	CIT3	P43635	486 aa		4.4	□□□□□ -1.7
SPE1	YKL184W	INP52	P50942	1183 aa		4.39	□□□□□ -1.71
SPE1	YKL184W	ULP1	Q02724	621 aa		4.39	□□□□□ -1.71
SPE1	YKL184W	NOG1	Q02892	647 aa	Known RBP	4.39	□□□□□ -1.71
SPE1	YKL184W	YML020W	Q03722	664 aa		4.39	□□□□□ -1.71
SPE1	YKL184W	LAP2	Q10740	671 aa		4.39	□□□□□ -1.71
SPE1	YKL184W	MSH3	P25336	1018 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	NNK1	P36003	928 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	ELA1	P53861	379 aa	Predicted RBP	4.38	□□□□□ -1.71
SPE1	YKL184W	SEN54	Q02825	467 aa	Predicted RBP	4.38	□□□□□ -1.71
SPE1	YKL184W	RPS4A	P0CX35	261 aa	Known RBP	4.38	□□□□□ -1.71
SPE1	YKL184W	RPS4B	P0CX36	261 aa	Known RBP	4.38	□□□□□ -1.71
SPE1	YKL184W	VMA4	P22203	233 aa	Known RBP	4.38	□□□□□ -1.71
SPE1	YKL184W	HEM3	P28789	327 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	RIP-Chip
SPE1	YKL184W	YKR073C	P36153	106 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	EXO5	P38289	585 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	HSE1	P38753	452 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	MSH4	P40965	878 aa	Predicted RBP	4.38	□□□□□ -1.71
SPE1	YKL184W	YGR045C	P53229	120 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	RCM1	P53972	490 aa		4.38	□□□□□ -1.71
SPE1	YKL184W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-DR6	P0CX70	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-ER1	P0CX71	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-LR2	P0CX72	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-PL	P0CX73	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-JR1	P0CX74	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-LR3	P0CX75	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-ML2	P0CX76	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	NFS1	P25374	497 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	SMY2	P32909	740 aa	Known RBP	4.37	□□□□□ -1.71
SPE1	YKL184W	WHI3	P34761	661 aa	Known RBP	4.37	□□□□□ -1.71
SPE1	YKL184W	SLS1	P42900	643 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	POL32	P47110	350 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	ADI1	Q03677	179 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	BRE4	Q07660	1125 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-GR1	Q12085	440 aa		4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.37	□□□□□ -1.71
SPE1	YKL184W	TY1A-OL	Q92392	440 aa	Known RBP	4.37	□□□□□ -1.71
SPE1	YKL184W	PRE9	P23638	258 aa	Known RBP	4.36	□□□□□ -1.71
SPE1	YKL184W	PEX28	P38848	579 aa		4.36	□□□□□ -1.71
SPE1	YKL184W	YAR028W	P39548	234 aa		4.36	□□□□□ -1.71
SPE1	YKL184W	MRPS18	P42847	217 aa		4.36	□□□□□ -1.71
SPE1	YKL184W	ASF1	P32447	279 aa		4.35	□□□□□ -1.71
SPE1	YKL184W	UGA4	P32837	571 aa		4.35	□□□□□ -1.71
SPE1	YKL184W	ALT1	P52893	592 aa		4.35	□□□□□ -1.71
SPE1	YKL184W	NEM1	P38757	446 aa		4.34	□□□□□ -1.71
SPE1	YKL184W	XKS1	P42826	600 aa		4.34	□□□□□ -1.71
SPE1	YKL184W	YNR063W	P53749	607 aa		4.34	□□□□□ -1.71
SPE1	YKL184W	UTP5	Q04177	643 aa	Known RBP	4.34	□□□□□ -1.71
SPE1	YKL184W	MCD1	Q12158	566 aa		4.34	□□□□□ -1.71
SPE1	YKL184W	HXK1	P04806	485 aa	Known RBP	4.33	□□□□□ -1.72
SPE1	YKL184W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
SPE1	YKL184W	YGR122W	P53272	402 aa		4.33	□□□□□ -1.72
SPE1	YKL184W	YPL109C	Q02981	657 aa		4.33	□□□□□ -1.72
SPE1	YKL184W	MAG2	Q06436	670 aa	Known RBP	4.33	□□□□□ -1.72
SPE1	YKL184W	RET1	P22276	1149 aa	Known RBP	4.32	□□□□□ -1.72
SPE1	YKL184W	ADD66	P36040	267 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms