RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W SAS3P34218 831 aa5.29□□□□□ -1.56
ABF1YKL112W ABZ1P37254 787 aaPredicted RBP5.29□□□□□ -1.56
ABF1YKL112W YGR117CP53270 476 aa5.29□□□□□ -1.56
ABF1YKL112W ALG12P53730 551 aa5.29□□□□□ -1.56
ABF1YKL112W TFB3Q03290 321 aa5.29□□□□□ -1.56
ABF1YKL112W DPL1Q05567 589 aa5.29□□□□□ -1.56
ABF1YKL112W PBS2P08018 668 aa5.29□□□□□ -1.56
ABF1YKL112W ANP1P32629 500 aa5.29□□□□□ -1.56
ABF1YKL112W TEA1P47988 759 aa5.29□□□□□ -1.56
ABF1YKL112W LYS2P07702 1392 aa5.28□□□□□ -1.56
ABF1YKL112W AUS1Q08409 1394 aa5.28□□□□□ -1.56
ABF1YKL112W FOB1O13329 566 aa5.28□□□□□ -1.56
ABF1YKL112W CIT2P08679 460 aa5.28□□□□□ -1.56
ABF1YKL112W RAD17P48581 401 aa5.28□□□□□ -1.56
ABF1YKL112W RRT6P53117 311 aaPredicted RBP5.28□□□□□ -1.56
ABF1YKL112W YNL247WP53852 767 aaKnown RBP5.28□□□□□ -1.56
ABF1YKL112W YLR271WQ06152 274 aa5.28□□□□□ -1.56
ABF1YKL112W SMD2Q06217 110 aaKnown RBP5.28□□□□□ -1.56
ABF1YKL112W GRC3Q07845 632 aa5.28□□□□□ -1.56
ABF1YKL112W PHM7Q12252 991 aa5.28□□□□□ -1.56
ABF1YKL112W APC2Q12440 853 aa5.28□□□□□ -1.56
ABF1YKL112W CSR2Q12734 1121 aa5.28□□□□□ -1.56
ABF1YKL112W SEC23P15303 768 aaKnown RBP5.28□□□□□ -1.56
ABF1YKL112W APE3P37302 537 aaKnown RBP5.28□□□□□ -1.56
ABF1YKL112W RXT2P38255 430 aa5.28□□□□□ -1.56
ABF1YKL112W OPY1P38271 328 aa5.28□□□□□ -1.56
ABF1YKL112W VPS29P38759 282 aa5.28□□□□□ -1.56
ABF1YKL112W YOR389WQ08912 624 aa5.28□□□□□ -1.56
ABF1YKL112W GLE1Q12315 538 aa5.28□□□□□ -1.56
ABF1YKL112W DPB3P27344 201 aa5.27□□□□□ -1.57
ABF1YKL112W KDX1P36005 433 aa5.27□□□□□ -1.57
ABF1YKL112W GRX7P38068 203 aa5.27□□□□□ -1.57
ABF1YKL112W PCS60P38137 543 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
ABF1YKL112W CCM1P48237 864 aaPredicted RBP5.27□□□□□ -1.57
ABF1YKL112W TAP42Q04372 366 aa5.27□□□□□ -1.57
ABF1YKL112W YVC1Q12324 675 aa5.27□□□□□ -1.57
ABF1YKL112W BIO2P32451 375 aa5.26□□□□□ -1.57
ABF1YKL112W NIP100P33420 868 aa5.26□□□□□ -1.57
ABF1YKL112W BUD27P43573 796 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
ABF1YKL112W CLA4P48562 842 aa5.26□□□□□ -1.57
ABF1YKL112W SXM1Q04175 944 aaKnown RBP5.26□□□□□ -1.57
ABF1YKL112W MAK21Q12176 1025 aaKnown RBP5.26□□□□□ -1.57
ABF1YKL112W TRS33Q99394 268 aa5.26□□□□□ -1.57
ABF1YKL112W HOM3P10869 527 aa5.26□□□□□ -1.57
ABF1YKL112W NAT1P12945 854 aaKnown RBP5.26□□□□□ -1.57
ABF1YKL112W PHO87P25360 923 aa5.26□□□□□ -1.57
ABF1YKL112W MAM1P40065 302 aa5.26□□□□□ -1.57
ABF1YKL112W EAR1Q03212 550 aa5.26□□□□□ -1.57
ABF1YKL112W RMT2Q03305 412 aa5.26□□□□□ -1.57
ABF1YKL112W ARV1Q06541 321 aa5.26□□□□□ -1.57
ABF1YKL112W PEP12P32854 288 aa5.25□□□□□ -1.57
ABF1YKL112W ATG19P35193 415 aa5.25□□□□□ -1.57
ABF1YKL112W RPC37P36121 282 aa5.25□□□□□ -1.57
ABF1YKL112W MXR1P40029 184 aa5.25□□□□□ -1.57
ABF1YKL112W UBP16Q02863 499 aa5.25□□□□□ -1.57
ABF1YKL112W ERV41Q04651 352 aa5.25□□□□□ -1.57
ABF1YKL112W TOR1P35169 2470 aa5.25□□□□□ -1.57
ABF1YKL112W CLC1P17891 233 aa5.25□□□□□ -1.57
ABF1YKL112W APN1P22936 367 aa5.25□□□□□ -1.57
ABF1YKL112W GCD6P32501 712 aaKnown RBP5.25□□□□□ -1.57
ABF1YKL112W DLD1P32891 587 aa5.25□□□□□ -1.57
ABF1YKL112W LAM1P38851 1228 aa5.25□□□□□ -1.57
ABF1YKL112W MEF2P39677 819 aa5.25□□□□□ -1.57
ABF1YKL112W POB3Q04636 552 aaKnown RBP5.25□□□□□ -1.57
ABF1YKL112W LSP1Q12230 341 aaKnown RBP5.25□□□□□ -1.57
ABF1YKL112W PET123P17558 318 aa5.24□□□□□ -1.57
ABF1YKL112W UBP12P39538 1254 aa5.24□□□□□ -1.57
ABF1YKL112W ARB1P40024 610 aaKnown RBP5.24□□□□□ -1.57
ABF1YKL112W RSM7P47150 247 aa5.24□□□□□ -1.57
ABF1YKL112W PSD2P53037 1138 aaKnown RBP5.24□□□□□ -1.57
ABF1YKL112W ISA1Q07821 250 aaPredicted RBP5.24□□□□□ -1.57
ABF1YKL112W BMS1Q08965 1183 aaKnown RBP5.24□□□□□ -1.57
ABF1YKL112W HAT1Q12341 374 aa5.24□□□□□ -1.57
ABF1YKL112W FBP1P09201 348 aa5.23□□□□□ -1.57
ABF1YKL112W BIM1P40013 344 aa5.23□□□□□ -1.57
ABF1YKL112W DOT6P40059 670 aaKnown RBP5.23□□□□□ -1.57
ABF1YKL112W FKH1P40466 484 aa5.23□□□□□ -1.57
ABF1YKL112W RBA50Q04418 439 aa5.23□□□□□ -1.57
ABF1YKL112W IME2P32581 645 aa5.23□□□□□ -1.57
ABF1YKL112W EFM2P38347 419 aa5.23□□□□□ -1.57
ABF1YKL112W APE4P38821 490 aa5.23□□□□□ -1.57
ABF1YKL112W VID27P40157 782 aa5.23□□□□□ -1.57
ABF1YKL112W ITC1P53125 1264 aa5.23□□□□□ -1.57
ABF1YKL112W SYF1Q04048 859 aaPredicted RBP5.23□□□□□ -1.57
ABF1YKL112W RNH1Q04740 348 aa5.23□□□□□ -1.57
ABF1YKL112W KAR5Q04746 504 aa5.23□□□□□ -1.57
ABF1YKL112W MAG2Q06436 670 aaKnown RBP5.23□□□□□ -1.57
ABF1YKL112W RKM4Q12504 494 aa5.23□□□□□ -1.57
ABF1YKL112W SSK22P25390 1331 aaPredicted RBP5.22□□□□□ -1.57
ABF1YKL112W KRR1P25586 316 aaPredicted RBP5.22□□□□□ -1.57
ABF1YKL112W AAD3P25612 363 aa5.22□□□□□ -1.57
ABF1YKL112W SER1P33330 395 aaKnown RBP5.22□□□□□ -1.57
ABF1YKL112W RRP8P38961 392 aaKnown RBP5.22□□□□□ -1.57
ABF1YKL112W YGR016WP53209 190 aa5.22□□□□□ -1.57
ABF1YKL112W TRM44Q02648 567 aaKnown RBP5.22□□□□□ -1.57
ABF1YKL112W CRF1Q04930 467 aa5.22□□□□□ -1.57
ABF1YKL112W ATG26Q06321 1198 aa5.22□□□□□ -1.57
ABF1YKL112W PMT7Q06644 662 aa5.22□□□□□ -1.57
ABF1YKL112W MPH2P0CD99 609 aa5.22□□□□□ -1.57
ABF1YKL112W MER1P16523 270 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms