RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W COQ2P32378 372 aa5.5□□□□□ -1.53
CAP1YKL007W PRP40P33203 583 aaKnown RBP5.5□□□□□ -1.53
CAP1YKL007W MGE1P38523 228 aa5.5□□□□□ -1.53
CAP1YKL007W DAK2P43550 591 aa5.5□□□□□ -1.53
CAP1YKL007W MEC3Q02574 474 aa5.5□□□□□ -1.53
CAP1YKL007W YOR223WQ12015 292 aa5.5□□□□□ -1.53
CAP1YKL007W ERS1P17261 260 aa5.49□□□□□ -1.53
CAP1YKL007W PGM1P33401 570 aaKnown RBP5.49□□□□□ -1.53
CAP1YKL007W KIP3P53086 805 aaKnown RBP5.49□□□□□ -1.53
CAP1YKL007W NCE103P53615 221 aa5.49□□□□□ -1.53
CAP1YKL007W DAL4Q04895 635 aa5.49□□□□□ -1.53
CAP1YKL007W REC8Q12188 680 aa5.49□□□□□ -1.53
CAP1YKL007W RPT1P33299 467 aaKnown RBP5.48□□□□□ -1.53
CAP1YKL007W POL32P47110 350 aa5.48□□□□□ -1.53
CAP1YKL007W NOG1Q02892 647 aaKnown RBP5.48□□□□□ -1.53
CAP1YKL007W SQT1P35184 431 aa5.47□□□□□ -1.53
CAP1YKL007W SAF1P38352 637 aa5.47□□□□□ -1.53
CAP1YKL007W CHS2P14180 963 aa5.46□□□□□ -1.54
CAP1YKL007W KAE1P36132 386 aa5.46□□□□□ -1.54
CAP1YKL007W REI1P38344 393 aaPredicted RBP5.46□□□□□ -1.54
CAP1YKL007W ULP1Q02724 621 aa5.46□□□□□ -1.54
CAP1YKL007W GIC2Q06648 383 aa5.46□□□□□ -1.54
CAP1YKL007W RSM26P47141 266 aa5.45□□□□□ -1.54
CAP1YKL007W ADI1Q03677 179 aa5.45□□□□□ -1.54
CAP1YKL007W DOT1Q04089 582 aaKnown RBP5.45□□□□□ -1.54
CAP1YKL007W EXO5P38289 585 aa5.44□□□□□ -1.54
CAP1YKL007W AKR1P39010 764 aa5.44□□□□□ -1.54
CAP1YKL007W MTR4P47047 1073 aaKnown RBP5.44□□□□□ -1.54
CAP1YKL007W YGR122WP53272 402 aa5.44□□□□□ -1.54
CAP1YKL007W MCD1Q12158 566 aa5.44□□□□□ -1.54
CAP1YKL007W HXK1P04806 485 aaKnown RBP5.43□□□□□ -1.54
CAP1YKL007W VMA4P22203 233 aaKnown RBP5.43□□□□□ -1.54
CAP1YKL007W ATG14P38270 344 aa5.43□□□□□ -1.54
CAP1YKL007W PEX13P80667 386 aa5.43□□□□□ -1.54
CAP1YKL007W YPL109CQ02981 657 aa5.43□□□□□ -1.54
CAP1YKL007W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
CAP1YKL007W AVO1Q08236 1176 aa5.43□□□□□ -1.54
CAP1YKL007W MSB1P21339 1137 aaKnown RBP5.42□□□□□ -1.54
CAP1YKL007W MSH3P25336 1018 aa5.42□□□□□ -1.54
CAP1YKL007W NAM7P30771 971 aaKnown RBP5.42□□□□□ -1.54
CAP1YKL007W MRPS18P42847 217 aa5.42□□□□□ -1.54
CAP1YKL007W YLR122CQ12312 125 aa5.42□□□□□ -1.54
CAP1YKL007W TY1A-LR4P0C2I8 440 aaKnown RBP5.41□□□□□ -1.54
CAP1YKL007W TY1A-DR6P0CX70 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-ER1P0CX71 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-LR2P0CX72 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-PLP0CX73 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-JR1P0CX74 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-LR3P0CX75 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-ML2P0CX76 440 aa5.41□□□□□ -1.54
CAP1YKL007W TAF13P11747 167 aa5.41□□□□□ -1.54
CAP1YKL007W GPT2P36148 743 aa5.41□□□□□ -1.54
CAP1YKL007W PEX28P38848 579 aa5.41□□□□□ -1.54
CAP1YKL007W YJR107WP47145 328 aa5.41□□□□□ -1.54
CAP1YKL007W MED7Q08278 222 aa5.41□□□□□ -1.54
CAP1YKL007W YOR059CQ08448 450 aaKnown RBP5.41□□□□□ -1.54
CAP1YKL007W TY1A-GR1Q12085 440 aa5.41□□□□□ -1.54
CAP1YKL007W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.41□□□□□ -1.54
CAP1YKL007W TY1A-OLQ92392 440 aaKnown RBP5.41□□□□□ -1.54
CAP1YKL007W ATE1P16639 503 aa5.4□□□□□ -1.54
CAP1YKL007W UGA4P32837 571 aa5.4□□□□□ -1.54
CAP1YKL007W NNK1P36003 928 aa5.4□□□□□ -1.54
CAP1YKL007W HSE1P38753 452 aa5.4□□□□□ -1.54
CAP1YKL007W FAA3P39002 694 aa5.4□□□□□ -1.54
CAP1YKL007W MMM1P41800 426 aa5.4□□□□□ -1.54
CAP1YKL007W RRP15Q06511 250 aaPredicted RBP5.4□□□□□ -1.54
CAP1YKL007W LAP2Q10740 671 aa5.4□□□□□ -1.54
CAP1YKL007W ALG6Q12001 544 aaKnown RBP5.4□□□□□ -1.54
CAP1YKL007W NSI1Q12457 570 aa5.4□□□□□ -1.54
CAP1YKL007W GLT1Q12680 2145 aaKnown RBP5.4□□□□□ -1.54
CAP1YKL007W PRE9P23638 258 aaKnown RBP5.39□□□□□ -1.55
CAP1YKL007W SLS1P42900 643 aa5.39□□□□□ -1.55
CAP1YKL007W SPO74P45819 413 aa5.39□□□□□ -1.55
CAP1YKL007W YGR045CP53229 120 aa5.39□□□□□ -1.55
CAP1YKL007W TOS4Q06266 489 aa5.39□□□□□ -1.55
CAP1YKL007W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
CAP1YKL007W RAD2P07276 1031 aa5.38□□□□□ -1.55
CAP1YKL007W SMY2P32909 740 aaKnown RBP5.38□□□□□ -1.55
CAP1YKL007W NEM1P38757 446 aa5.38□□□□□ -1.55
CAP1YKL007W YAR028WP39548 234 aa5.38□□□□□ -1.55
CAP1YKL007W RPS26AP39938 119 aaKnown RBP5.38□□□□□ -1.55
CAP1YKL007W RPS26BP39939 119 aaKnown RBP5.38□□□□□ -1.55
CAP1YKL007W MSH4P40965 878 aaPredicted RBP5.38□□□□□ -1.55
CAP1YKL007W CIT3P43635 486 aa5.38□□□□□ -1.55
CAP1YKL007W YGL140CP53120 1219 aa5.38□□□□□ -1.55
CAP1YKL007W RMD1Q03441 430 aa5.38□□□□□ -1.55
CAP1YKL007W RKM2Q03942 479 aa5.38□□□□□ -1.55
CAP1YKL007W UTP5Q04177 643 aaKnown RBP5.38□□□□□ -1.55
CAP1YKL007W RPS4AP0CX35 261 aaKnown RBP5.37□□□□□ -1.55
CAP1YKL007W RPS4BP0CX36 261 aaKnown RBP5.37□□□□□ -1.55
CAP1YKL007W CYC8P14922 966 aa5.37□□□□□ -1.55
CAP1YKL007W SEC23P15303 768 aaKnown RBP5.37□□□□□ -1.55
CAP1YKL007W NFS1P25374 497 aa5.37□□□□□ -1.55
CAP1YKL007W YGR130CP53278 816 aa5.37□□□□□ -1.55
CAP1YKL007W ELA1P53861 379 aaPredicted RBP5.37□□□□□ -1.55
CAP1YKL007W ESF1Q06344 628 aaKnown RBP5.37□□□□□ -1.55
CAP1YKL007W SEC8P32855 1065 aa5.36□□□□□ -1.55
CAP1YKL007W MAC1P35192 417 aa5.36□□□□□ -1.55
CAP1YKL007W ADD66P36040 267 aa5.36□□□□□ -1.55
CAP1YKL007W OMA1P36163 345 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms