RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C RRP15Q06511 250 aaPredicted RBP5.32□□□□□ -1.56
ATG27YJL178C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
ATG27YJL178C YIG1Q08956 461 aa5.32□□□□□ -1.56
ATG27YJL178C COQ2P32378 372 aa5.31□□□□□ -1.56
ATG27YJL178C RVS167P39743 482 aaKnown RBP5.31□□□□□ -1.56
ATG27YJL178C ALO1P54783 526 aaKnown RBP5.31□□□□□ -1.56
ATG27YJL178C TRP3P00937 484 aa5.3□□□□□ -1.56
ATG27YJL178C RPT1P33299 467 aaKnown RBP5.3□□□□□ -1.56
ATG27YJL178C FAR11P53917 953 aa5.3□□□□□ -1.56
ATG27YJL178C GLT1Q12680 2145 aaKnown RBP5.29□□□□□ -1.56
ATG27YJL178C TY1A-LR4P0C2I8 440 aaKnown RBP5.29□□□□□ -1.56
ATG27YJL178C TY1A-DR6P0CX70 440 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-ER1P0CX71 440 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-LR2P0CX72 440 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-PLP0CX73 440 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-JR1P0CX74 440 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-LR3P0CX75 440 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-ML2P0CX76 440 aa5.29□□□□□ -1.56
ATG27YJL178C MCM5P29496 775 aaKnown RBP5.29□□□□□ -1.56
ATG27YJL178C GCV1P48015 400 aa5.29□□□□□ -1.56
ATG27YJL178C UTP22P53254 1237 aaPredicted RBP5.29□□□□□ -1.56
ATG27YJL178C OXR1Q08952 273 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-GR1Q12085 440 aa5.29□□□□□ -1.56
ATG27YJL178C YLL054CQ12244 843 aa5.29□□□□□ -1.56
ATG27YJL178C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.29□□□□□ -1.56
ATG27YJL178C TY1A-OLQ92392 440 aaKnown RBP5.29□□□□□ -1.56
ATG27YJL178C KAR2P16474 682 aaKnown RBP5.28□□□□□ -1.56
ATG27YJL178C MCM2P29469 868 aa5.28□□□□□ -1.56
ATG27YJL178C UGA4P32837 571 aa5.28□□□□□ -1.56
ATG27YJL178C KAE1P36132 386 aa5.28□□□□□ -1.56
ATG27YJL178C YKR073CP36153 106 aa5.28□□□□□ -1.56
ATG27YJL178C SHU2P38957 223 aa5.28□□□□□ -1.56
ATG27YJL178C INP52P50942 1183 aa5.28□□□□□ -1.56
ATG27YJL178C MEC3Q02574 474 aa5.28□□□□□ -1.56
ATG27YJL178C YMR074CQ04773 145 aa5.28□□□□□ -1.56
ATG27YJL178C DAL4Q04895 635 aa5.28□□□□□ -1.56
ATG27YJL178C YOR223WQ12015 292 aa5.28□□□□□ -1.56
ATG27YJL178C PRP40P33203 583 aaKnown RBP5.27□□□□□ -1.57
ATG27YJL178C EXO5P38289 585 aa5.27□□□□□ -1.57
ATG27YJL178C CHS2P14180 963 aa5.26□□□□□ -1.57
ATG27YJL178C ASF1P32447 279 aa5.26□□□□□ -1.57
ATG27YJL178C SEC8P32855 1065 aa5.26□□□□□ -1.57
ATG27YJL178C GPT2P36148 743 aa5.26□□□□□ -1.57
ATG27YJL178C ARL1P38116 183 aaKnown RBP5.26□□□□□ -1.57
ATG27YJL178C MGE1P38523 228 aa5.26□□□□□ -1.57
ATG27YJL178C YGR130CP53278 816 aa5.26□□□□□ -1.57
ATG27YJL178C NOG1Q02892 647 aaKnown RBP5.26□□□□□ -1.57
ATG27YJL178C DOT1Q04089 582 aaKnown RBP5.26□□□□□ -1.57
ATG27YJL178C GIC2Q06648 383 aa5.26□□□□□ -1.57
ATG27YJL178C ALG6Q12001 544 aaKnown RBP5.26□□□□□ -1.57
ATG27YJL178C FAA3P39002 694 aa5.25□□□□□ -1.57
ATG27YJL178C FYV10P40492 516 aa5.25□□□□□ -1.57
ATG27YJL178C YJR107WP47145 328 aa5.25□□□□□ -1.57
ATG27YJL178C OYE2Q03558 400 aaKnown RBP5.25□□□□□ -1.57
ATG27YJL178C OMA1P36163 345 aa5.24□□□□□ -1.57
ATG27YJL178C REI1P38344 393 aaPredicted RBP5.24□□□□□ -1.57
ATG27YJL178C SLS1P42900 643 aa5.24□□□□□ -1.57
ATG27YJL178C ULP1Q02724 621 aa5.24□□□□□ -1.57
ATG27YJL178C SPR28Q04921 423 aa5.24□□□□□ -1.57
ATG27YJL178C MED7Q08278 222 aa5.24□□□□□ -1.57
ATG27YJL178C YKL077WP36081 392 aa5.23□□□□□ -1.57
ATG27YJL178C NEM1P38757 446 aa5.23□□□□□ -1.57
ATG27YJL178C RPS26AP39938 119 aaKnown RBP5.23□□□□□ -1.57
ATG27YJL178C RPS26BP39939 119 aaKnown RBP5.23□□□□□ -1.57
ATG27YJL178C SPO74P45819 413 aa5.23□□□□□ -1.57
ATG27YJL178C CTH1P47976 325 aa5.23□□□□□ -1.57
ATG27YJL178C HXK1P04806 485 aaKnown RBP5.22□□□□□ -1.57
ATG27YJL178C MSB1P21339 1137 aaKnown RBP5.22□□□□□ -1.57
ATG27YJL178C YGR045CP53229 120 aa5.22□□□□□ -1.57
ATG27YJL178C YPL109CQ02981 657 aa5.22□□□□□ -1.57
ATG27YJL178C MSH3P25336 1018 aa5.21□□□□□ -1.58
ATG27YJL178C WHI3P34761 661 aaKnown RBP5.21□□□□□ -1.58
ATG27YJL178C SQT1P35184 431 aa5.21□□□□□ -1.58
ATG27YJL178C MAC1P35192 417 aa5.21□□□□□ -1.58
ATG27YJL178C TOS1P38288 455 aa5.21□□□□□ -1.58
ATG27YJL178C MSH4P40965 878 aaPredicted RBP5.21□□□□□ -1.58
ATG27YJL178C RSM26P47141 266 aa5.21□□□□□ -1.58
ATG27YJL178C YGR122WP53272 402 aa5.21□□□□□ -1.58
ATG27YJL178C ADI1Q03677 179 aa5.21□□□□□ -1.58
ATG27YJL178C CYC7P00045 113 aa5.2□□□□□ -1.58
ATG27YJL178C HEM13P11353 328 aaKnown RBP5.2□□□□□ -1.58
ATG27YJL178C PUB1P32588 453 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
ATG27YJL178C SEA4P38164 1038 aa5.2□□□□□ -1.58
ATG27YJL178C PEX13P80667 386 aa5.2□□□□□ -1.58
ATG27YJL178C EAR1Q03212 550 aa5.2□□□□□ -1.58
ATG27YJL178C GCD1P09032 578 aaPredicted RBP5.19□□□□□ -1.58
ATG27YJL178C VMA4P22203 233 aaKnown RBP5.19□□□□□ -1.58
ATG27YJL178C RDH54P38086 958 aa5.19□□□□□ -1.58
ATG27YJL178C MMM1P41800 426 aa5.19□□□□□ -1.58
ATG27YJL178C MTR4P47047 1073 aaKnown RBP5.19□□□□□ -1.58
ATG27YJL178C ALT1P52893 592 aa5.19□□□□□ -1.58
ATG27YJL178C ELA1P53861 379 aaPredicted RBP5.19□□□□□ -1.58
ATG27YJL178C UTP5Q04177 643 aaKnown RBP5.19□□□□□ -1.58
ATG27YJL178C MAG2Q06436 670 aaKnown RBP5.19□□□□□ -1.58
ATG27YJL178C MCD1Q12158 566 aa5.19□□□□□ -1.58
ATG27YJL178C RPS4AP0CX35 261 aaKnown RBP5.18□□□□□ -1.58
ATG27YJL178C RPS4BP0CX36 261 aaKnown RBP5.18□□□□□ -1.58
ATG27YJL178C CYC8P14922 966 aa5.18□□□□□ -1.58
ATG27YJL178C PEP7P32609 515 aa5.18□□□□□ -1.58
ATG27YJL178C PEX28P38848 579 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms