RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RPB10P22139 70 aa5.15□□□□□ -1.59
PEP8YJL053W PEX7P39108 375 aa5.15□□□□□ -1.59
PEP8YJL053W EAR1Q03212 550 aa5.15□□□□□ -1.59
PEP8YJL053W CWC15Q03772 175 aaKnown RBP5.15□□□□□ -1.59
PEP8YJL053W ALG6Q12001 544 aaKnown RBP5.15□□□□□ -1.59
PEP8YJL053W LPX1Q12405 387 aaKnown RBP5.15□□□□□ -1.59
PEP8YJL053W REI1P38344 393 aaPredicted RBP5.14□□□□□ -1.59
PEP8YJL053W MEC3Q02574 474 aa5.14□□□□□ -1.59
PEP8YJL053W NFS1P25374 497 aa5.13□□□□□ -1.59
PEP8YJL053W TOD6P34219 525 aa5.13□□□□□ -1.59
PEP8YJL053W GTS1P40956 396 aa5.13□□□□□ -1.59
PEP8YJL053W HTS1P07263 546 aaKnown RBP5.11□□□□□ -1.59
PEP8YJL053W NPR1P22211 790 aa5.11□□□□□ -1.59
PEP8YJL053W FOL2P51601 243 aaKnown RBP5.11□□□□□ -1.59
PEP8YJL053W FUR4P05316 633 aaKnown RBP5.1□□□□□ -1.59
PEP8YJL053W SMY2P32909 740 aaKnown RBP5.1□□□□□ -1.59
PEP8YJL053W ETP1P38748 585 aaKnown RBP5.1□□□□□ -1.59
PEP8YJL053W UTP22P53254 1237 aaPredicted RBP5.1□□□□□ -1.59
PEP8YJL053W AVO1Q08236 1176 aa5.1□□□□□ -1.59
PEP8YJL053W SOD2P00447 233 aa5.09□□□□□ -1.59
PEP8YJL053W NNK1P36003 928 aa5.09□□□□□ -1.59
PEP8YJL053W ABZ1P37254 787 aaPredicted RBP5.09□□□□□ -1.59
PEP8YJL053W ELA1P53861 379 aaPredicted RBP5.09□□□□□ -1.59
PEP8YJL053W YDL177CQ12257 170 aa5.09□□□□□ -1.59
PEP8YJL053W TUB2P02557 457 aaKnown RBP5.08□□□□□ -1.6
PEP8YJL053W RPS13P05756 151 aaKnown RBP5.08□□□□□ -1.6
PEP8YJL053W LSO1Q3E827 93 aa5.08□□□□□ -1.6
PEP8YJL053W CTR9P89105 1077 aa5.07□□□□□ -1.6
PEP8YJL053W YPL277CQ08989 487 aa5.07□□□□□ -1.6
PEP8YJL053W PNS1Q12412 539 aa5.07□□□□□ -1.6
PEP8YJL053W TAD3Q9URQ3 322 aa5.07□□□□□ -1.6
PEP8YJL053W YLR358CO13565 187 aa5.06□□□□□ -1.6
PEP8YJL053W YGR045CP53229 120 aa5.06□□□□□ -1.6
PEP8YJL053W SNO2P53823 222 aa5.06□□□□□ -1.6
PEP8YJL053W CMR1Q12510 522 aaKnown RBP5.06□□□□□ -1.6
PEP8YJL053W RIM11P38615 370 aa5.05□□□□□ -1.6
PEP8YJL053W SHM2P37291 469 aaKnown RBP5.04□□□□□ -1.6
PEP8YJL053W CLU1Q03690 1277 aaKnown RBP5.04□□□□□ -1.6
PEP8YJL053W YML083CQ04526 418 aa5.04□□□□□ -1.6
PEP8YJL053W TPP1Q03796 238 aa5.03□□□□□ -1.6
PEP8YJL053W PUS7Q08647 676 aaKnown RBP5.02□□□□□ -1.61
PEP8YJL053W YOR352WQ08816 343 aa5.02□□□□□ -1.61
PEP8YJL053W PRP5P21372 849 aaPredicted RBP5.01□□□□□ -1.61
PEP8YJL053W COBP00163 385 aa5□□□□□ -1.61
PEP8YJL053W LEO1P38439 464 aa5□□□□□ -1.61
PEP8YJL053W SSA4P22202 642 aaKnown RBP4.99□□□□□ -1.61
PEP8YJL053W ARL1P38116 183 aaKnown RBP4.99□□□□□ -1.61
PEP8YJL053W CTS1P29029 562 aa4.98□□□□□ -1.61
PEP8YJL053W YHL012WP38709 493 aa4.98□□□□□ -1.61
PEP8YJL053W DUR3P33413 735 aa4.97□□□□□ -1.61
PEP8YJL053W YKL077WP36081 392 aa4.97□□□□□ -1.61
PEP8YJL053W MPT5P39016 859 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
PEP8YJL053W UFD2P54860 961 aa4.97□□□□□ -1.61
PEP8YJL053W PRE10P21242 288 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
PEP8YJL053W AIM26P32858 118 aa4.96□□□□□ -1.62
PEP8YJL053W BOL3P39724 118 aa4.96□□□□□ -1.62
PEP8YJL053W RSC4Q02206 625 aa4.96□□□□□ -1.62
PEP8YJL053W NOB1Q08444 459 aaKnown RBP4.96□□□□□ -1.62
PEP8YJL053W MCM5P29496 775 aaKnown RBP4.95□□□□□ -1.62
PEP8YJL053W MDL2P33311 773 aa4.95□□□□□ -1.62
PEP8YJL053W YPT53P36019 220 aa4.95□□□□□ -1.62
PEP8YJL053W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.95□□□□□ -1.62not detected
PEP8YJL053W PMT7Q06644 662 aa4.95□□□□□ -1.62
PEP8YJL053W TY1A-LR4P0C2I8 440 aaKnown RBP4.94□□□□□ -1.62
PEP8YJL053W TY1A-DR6P0CX70 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-ER1P0CX71 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-LR2P0CX72 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-PLP0CX73 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-JR1P0CX74 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-LR3P0CX75 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-ML2P0CX76 440 aa4.94□□□□□ -1.62
PEP8YJL053W NMD3P38861 518 aaKnown RBP4.94□□□□□ -1.62
PEP8YJL053W TY1A-GR1Q12085 440 aa4.94□□□□□ -1.62
PEP8YJL053W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.94□□□□□ -1.62
PEP8YJL053W TY1A-OLQ92392 440 aaKnown RBP4.94□□□□□ -1.62
PEP8YJL053W ATG14P38270 344 aa4.93□□□□□ -1.62
PEP8YJL053W GLO3P38682 493 aaKnown RBP4.93□□□□□ -1.62
PEP8YJL053W TAT2P38967 592 aa4.93□□□□□ -1.62
PEP8YJL053W SPT20P50875 604 aa4.93□□□□□ -1.62
PEP8YJL053W YAF9P53930 226 aa4.93□□□□□ -1.62
PEP8YJL053W SAM35P14693 329 aa4.92□□□□□ -1.62
PEP8YJL053W RET1P22276 1149 aaKnown RBP4.92□□□□□ -1.62
PEP8YJL053W HSE1P38753 452 aa4.92□□□□□ -1.62
PEP8YJL053W YAR028WP39548 234 aa4.92□□□□□ -1.62
PEP8YJL053W BSC2Q05611 235 aa4.92□□□□□ -1.62
PEP8YJL053W YLR257WQ06146 321 aaKnown RBP4.92□□□□□ -1.62
PEP8YJL053W SAP155P43612 1002 aa4.91□□□□□ -1.62
PEP8YJL053W YNL011CP53980 444 aa4.91□□□□□ -1.62
PEP8YJL053W TRM2P33753 639 aa4.9□□□□□ -1.63
PEP8YJL053W SHU2P38957 223 aa4.9□□□□□ -1.63
PEP8YJL053W SLS1P42900 643 aa4.9□□□□□ -1.63
PEP8YJL053W NUT1P53114 1132 aa4.9□□□□□ -1.63
PEP8YJL053W ENV11P53246 860 aa4.9□□□□□ -1.63
PEP8YJL053W NBA1Q08229 501 aaKnown RBP4.9□□□□□ -1.63
PEP8YJL053W HRK1Q08732 759 aaKnown RBP4.9□□□□□ -1.63
PEP8YJL053W LAP2Q10740 671 aa4.9□□□□□ -1.63
PEP8YJL053W FLP1P03870 423 aa4.89□□□□□ -1.63
PEP8YJL053W SPS1P08458 490 aa4.89□□□□□ -1.63
PEP8YJL053W SRO9P25567 434 aaKnown RBP4.88□□□□□ -1.63
PEP8YJL053W RVS167P39743 482 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms