RNA–Protein interactions for RNA: YIL042C

PKP1, Transcript of Mitochondrial protein kinase, yeast

Gene PKP1, Length 1,185 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKP1	YIL042C	EUG1	P32474	517 aa		18.29	■□□□□ 0.52
PKP1	YIL042C	RER2	P35196	286 aa		18.29	■□□□□ 0.52
PKP1	YIL042C	PAM1	P37304	830 aa	Known RBP	18.29	■□□□□ 0.52
PKP1	YIL042C	GCR2	Q01722	534 aa		18.29	■□□□□ 0.52
PKP1	YIL042C	VMA2	P16140	517 aa	Known RBP	18.28	■□□□□ 0.52
PKP1	YIL042C	GPB2	P39717	880 aa		18.28	■□□□□ 0.52
PKP1	YIL042C	PSF2	P40359	213 aa		18.28	■□□□□ 0.52
PKP1	YIL042C	FOL1	P53848	824 aa		18.28	■□□□□ 0.52
PKP1	YIL042C	RAD18	P10862	487 aa		18.27	■□□□□ 0.52
PKP1	YIL042C	HXT17	P53631	564 aa		18.27	■□□□□ 0.52
PKP1	YIL042C	ULP1	Q02724	621 aa		18.27	■□□□□ 0.52
PKP1	YIL042C	ALD6	P54115	500 aa	Known RBP	18.26	■□□□□ 0.51
PKP1	YIL042C	MYO5	Q04439	1219 aa	Known RBP	18.26	■□□□□ 0.51
PKP1	YIL042C	NUC1	P08466	329 aa		18.25	■□□□□ 0.51
PKP1	YIL042C	VPS30	Q02948	557 aa		18.25	■□□□□ 0.51
PKP1	YIL042C	PHO88	P38264	188 aa	Predicted RBP	18.24	■□□□□ 0.51
PKP1	YIL042C	RPT6	Q01939	405 aa	Known RBP	18.24	■□□□□ 0.51
PKP1	YIL042C	MAC1	P35192	417 aa		18.23	■□□□□ 0.51
PKP1	YIL042C	CIC1	P38779	376 aa	Known RBP	18.23	■□□□□ 0.51
PKP1	YIL042C	PGA3	Q12746	312 aa	Known RBP	18.23	■□□□□ 0.51
PKP1	YIL042C	MAK31	P23059	88 aa		18.22	■□□□□ 0.51
PKP1	YIL042C	TGL1	P34163	548 aa		18.22	■□□□□ 0.51
PKP1	YIL042C	HXT13	P39924	564 aa		18.22	■□□□□ 0.51
PKP1	YIL042C	MXR1	P40029	184 aa		18.22	■□□□□ 0.51
PKP1	YIL042C	PEP3	P27801	918 aa		18.21	■□□□□ 0.51
PKP1	YIL042C	RPL8B	P29453	256 aa	Known RBP	18.21	■□□□□ 0.51
PKP1	YIL042C	IMP2'	P32351	346 aa		18.21	■□□□□ 0.51
PKP1	YIL042C	PAH1	P32567	862 aa		18.21	■□□□□ 0.51
PKP1	YIL042C	UTR4	P32626	227 aa		18.21	■□□□□ 0.51
PKP1	YIL042C	TFC6	Q06339	672 aa		18.21	■□□□□ 0.51
PKP1	YIL042C	SRP54	P20424	541 aa	Known RBP	18.2	■□□□□ 0.5
PKP1	YIL042C	CSM2	P40465	213 aa		18.2	■□□□□ 0.5
PKP1	YIL042C	YAF9	P53930	226 aa		18.2	■□□□□ 0.5
PKP1	YIL042C	TMA64	Q04600	565 aa	Known RBP	18.2	■□□□□ 0.5
PKP1	YIL042C	DUS4	Q06063	367 aa		18.2	■□□□□ 0.5
PKP1	YIL042C	ICL2	Q12031	575 aa		18.2	■□□□□ 0.5
PKP1	YIL042C	PRY3	P47033	881 aa		18.19	■□□□□ 0.5
PKP1	YIL042C	CLF1	Q12309	687 aa	Predicted RBP	18.19	■□□□□ 0.5
PKP1	YIL042C	TPM1	P17536	199 aa	Known RBP	18.18	■□□□□ 0.5
PKP1	YIL042C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	18.18	■□□□□ 0.5	not detected
PKP1	YIL042C	DLD1	P32891	587 aa		18.18	■□□□□ 0.5
PKP1	YIL042C	VPS45	P38932	577 aa		18.18	■□□□□ 0.5
PKP1	YIL042C	SUE1	Q06524	206 aa		18.18	■□□□□ 0.5
PKP1	YIL042C	SAM1	P10659	382 aa	Known RBP	18.17	■□□□□ 0.5
PKP1	YIL042C	YKR018C	P36114	725 aa		18.17	■□□□□ 0.5
PKP1	YIL042C	ECM23	Q02710	187 aa		18.17	■□□□□ 0.5
PKP1	YIL042C	CDC19	P00549	500 aa	Known RBP	18.16	■□□□□ 0.5
PKP1	YIL042C	YGR125W	P53273	1036 aa		18.16	■□□□□ 0.5
PKP1	YIL042C	SPH1	Q06160	661 aa		18.16	■□□□□ 0.5
PKP1	YIL042C	UTP4	Q06679	776 aa	Known RBP	18.16	■□□□□ 0.5
PKP1	YIL042C	EST2	Q06163	884 aa		18.15	■□□□□ 0.5
PKP1	YIL042C	CSC1	Q06538	782 aa		18.15	■□□□□ 0.5
PKP1	YIL042C	MET7	Q08645	548 aa		18.15	■□□□□ 0.5
PKP1	YIL042C	VPS62	P53285	467 aa		18.14	■□□□□ 0.49
PKP1	YIL042C	RGT1	P32862	1170 aa		18.13	■□□□□ 0.49
PKP1	YIL042C	AIM9	P40053	627 aa	Known RBP	18.13	■□□□□ 0.49
PKP1	YIL042C	AIM21	P40563	679 aa		18.13	■□□□□ 0.49
PKP1	YIL042C	ECM29	P38737	1868 aa		18.12	■□□□□ 0.49
PKP1	YIL042C	SHP1	P34223	423 aa		18.12	■□□□□ 0.49
PKP1	YIL042C	VPS29	P38759	282 aa		18.12	■□□□□ 0.49
PKP1	YIL042C	MDM1	Q01846	1127 aa		18.12	■□□□□ 0.49
PKP1	YIL042C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	18.12	■□□□□ 0.49	not detected
PKP1	YIL042C	ALG2	P43636	503 aa		18.11	■□□□□ 0.49
PKP1	YIL042C	BUL2	Q03758	920 aa	Known RBP	18.11	■□□□□ 0.49
PKP1	YIL042C	DSE3	Q08729	430 aa		18.11	■□□□□ 0.49
PKP1	YIL042C	SUT2	Q12286	268 aa		18.11	■□□□□ 0.49
PKP1	YIL042C	MYO1	P08964	1928 aa		18.11	■□□□□ 0.49
PKP1	YIL042C	SRP40	P32583	406 aa	Predicted RBP	18.1	■□□□□ 0.49
PKP1	YIL042C	BRE5	P53741	515 aa	Known RBP	18.1	■□□□□ 0.49
PKP1	YIL042C	DUS3	Q06053	668 aa	Known RBP	18.1	■□□□□ 0.49
PKP1	YIL042C	YOR111W	Q99210	232 aa		18.1	■□□□□ 0.49
PKP1	YIL042C	TOM71	P38825	639 aa	Known RBP	18.09	■□□□□ 0.49
PKP1	YIL042C	AFG3	P39925	761 aa		18.09	■□□□□ 0.49
PKP1	YIL042C	SPO22	P40511	975 aa		18.09	■□□□□ 0.49
PKP1	YIL042C	ESF1	Q06344	628 aa	Known RBP	18.09	■□□□□ 0.49
PKP1	YIL042C	GUD1	Q07729	489 aa		18.09	■□□□□ 0.49
PKP1	YIL042C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	18.08	■□□□□ 0.48	not detected
PKP1	YIL042C	MCR1	P36060	302 aa	Known RBP	18.08	■□□□□ 0.48
PKP1	YIL042C	NDT80	P38830	627 aa		18.08	■□□□□ 0.48
PKP1	YIL042C	BCS1	P32839	456 aa		18.07	■□□□□ 0.48
PKP1	YIL042C	LSB1	P53281	241 aa		18.07	■□□□□ 0.48
PKP1	YIL042C	ERP3	Q12403	225 aa		18.07	■□□□□ 0.48
PKP1	YIL042C	YOR131C	Q12486	218 aa		18.07	■□□□□ 0.48
PKP1	YIL042C	TRL1	P09880	827 aa	Known RBP	18.06	■□□□□ 0.48
PKP1	YIL042C	RNR3	P21672	869 aa	Known RBP	18.06	■□□□□ 0.48
PKP1	YIL042C	LDH1	P38139	375 aa		18.06	■□□□□ 0.48
PKP1	YIL042C	TAO3	P40468	2376 aa		18.05	■□□□□ 0.48
PKP1	YIL042C	MAL31	P38156	614 aa		18.05	■□□□□ 0.48
PKP1	YIL042C	MDM20	Q12387	796 aa	Known RBP	18.05	■□□□□ 0.48
PKP1	YIL042C	YUR1	P26725	428 aa		18.04	■□□□□ 0.48
PKP1	YIL042C	DBP7	P36120	742 aa	Known RBP	18.04	■□□□□ 0.48
PKP1	YIL042C	FMS1	P50264	508 aa		18.04	■□□□□ 0.48
PKP1	YIL042C	SLD5	Q03406	294 aa		18.04	■□□□□ 0.48
PKP1	YIL042C	YLR326W	Q06170	240 aa	Known RBP	18.04	■□□□□ 0.48
PKP1	YIL042C	SEC20	P28791	383 aa		18.02	■□□□□ 0.48
PKP1	YIL042C	AKR1	P39010	764 aa		18.02	■□□□□ 0.48
PKP1	YIL042C	YJR107W	P47145	328 aa		18.02	■□□□□ 0.48
PKP1	YIL042C	SCS3	P53012	380 aa		18.02	■□□□□ 0.48
PKP1	YIL042C	YGL039W	P53183	348 aa	Known RBP	18.02	■□□□□ 0.48
PKP1	YIL042C	ISA1	Q07821	250 aa	Predicted RBP	18.02	■□□□□ 0.48

Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms