RNA–Protein interactions for RNA: YIL013C

PDR11, Transcript of ATP-binding cassette (ABC) transporter, yeast

Gene PDR11, Length 4,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR11	YIL013C	YJR107W	P47145	328 aa		2.74	□□□□□ -1.97
PDR11	YIL013C	ALO1	P54783	526 aa	Known RBP	2.74	□□□□□ -1.97
PDR11	YIL013C	YDR341C	Q05506	607 aa	Known RBP	2.74	□□□□□ -1.97
PDR11	YIL013C	CSC1	Q06538	782 aa		2.74	□□□□□ -1.97
PDR11	YIL013C	SWI6	P09959	803 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	RPL19A	P0CX82	189 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	RPL19B	P0CX83	189 aa	Predicted RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	SRM1	P21827	482 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	GSY1	P23337	708 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	PKC1	P24583	1151 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	LCB1	P25045	558 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	ASF1	P32447	279 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	SPL2	P38839	148 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	YGL081W	P53156	320 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	VPS30	Q02948	557 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	MSC6	Q08818	692 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	YIL177C	P40434	1758 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	YJL225C	P40889	1758 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	CDC48	P25694	835 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	SMY2	P32909	740 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	BUD2	P33314	1104 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	ATG19	P35193	415 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	UBP9	P39967	754 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	GCR2	Q01722	534 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	TIP41	Q12199	356 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	YLR278C	Q05854	1341 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	RIM15	P43565	1770 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	AI2	P03876	854 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	KEX1	P09620	729 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	FRS2	P15625	503 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	GAP1	P19145	602 aa	Predicted RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	ANP1	P32629	500 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	PRY3	P47033	881 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	NCS6	P53088	359 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	YLR225C	Q05948	407 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	GAS5	Q08193	484 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	CDC16	P09798	840 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	KIN1	P13185	1064 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	RER2	P35196	286 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	STV1	P37296	890 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	FYV10	P40492	516 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	FAR11	P53917	953 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	YML037C	Q03703	340 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	TOS4	Q06266	489 aa		2.73	□□□□□ -1.97
PDR11	YIL013C	VIP1	Q06685	1146 aa	Known RBP	2.73	□□□□□ -1.97
PDR11	YIL013C	HSP82	P02829	709 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	MAK11	P20484	414 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	ACE2	P21192	770 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	EUG1	P32474	517 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	BMH2	P34730	273 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	LDH1	P38139	375 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	MDR1	P53258	950 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	YGR125W	P53273	1036 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	SDA1	P53313	767 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	DMA2	P53924	522 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	YOR131C	Q12486	218 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	AFT1	P22149	690 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	MCM4	P30665	933 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	VPS24	P36095	224 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	YKL023W	P36103	277 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	YHL017W	P38745	532 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	HMF1	P40037	129 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	SET4	P42948	560 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	HXT10	P43581	546 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	MRPS35	P53292	345 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	ZPR1	P53303	486 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	NAF1	P53919	492 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	SDH5	Q08230	162 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	ICL2	Q12031	575 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	SNA3	P14359	133 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	SRO9	P25567	434 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	SAC6	P32599	642 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	HAL5	P38970	855 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	ALT2	P52892	507 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	MCM6	P53091	1017 aa	Known RBP	2.72	□□□□□ -1.97
PDR11	YIL013C	MAM3	Q12296	706 aa		2.72	□□□□□ -1.97
PDR11	YIL013C	THR4	P16120	514 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	KGD2	P19262	463 aa	Predicted RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	RGT1	P32862	1170 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	ASH1	P34233	588 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	RPN3	P40016	523 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	SMC3	P47037	1230 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	UBP15	P50101	1230 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	PSP2	P50109	593 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	ALD6	P54115	500 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	SMC5	Q08204	1093 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	RTP1	Q12751	981 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	HXK1	P04806	485 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	HVG1	P0CE11	249 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	COQ1	P18900	473 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	DIT2	P21595	489 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	MAK31	P23059	88 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	TIM23	P32897	222 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	BRN1	P38170	754 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	MXR1	P40029	184 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	YFL040W	P43562	540 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	ENT3	P47160	408 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	DSE4	P53753	1117 aa		2.71	□□□□□ -1.98
PDR11	YIL013C	DUS1	P53759	423 aa	Known RBP	2.71	□□□□□ -1.98
PDR11	YIL013C	OSW2	Q12202	724 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms