RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	ERS1	P17261	260 aa		4.67	□□□□□ -1.66
VMA10	YHR039C-A	MAE1	P36013	669 aa	Known RBP	4.67	□□□□□ -1.66
VMA10	YHR039C-A	TAT1	P38085	619 aa		4.67	□□□□□ -1.66
VMA10	YHR039C-A	FAA3	P39002	694 aa		4.67	□□□□□ -1.66
VMA10	YHR039C-A	ULP1	Q02724	621 aa		4.67	□□□□□ -1.66
VMA10	YHR039C-A	OYE2	Q03558	400 aa	Known RBP	4.67	□□□□□ -1.66
VMA10	YHR039C-A	MTC5	Q03897	1148 aa		4.67	□□□□□ -1.66
VMA10	YHR039C-A	MCA1	Q08601	432 aa		4.67	□□□□□ -1.66
VMA10	YHR039C-A	MCM2	P29469	868 aa		4.66	□□□□□ -1.66
VMA10	YHR039C-A	CCT8	P47079	568 aa	Known RBP	4.66	□□□□□ -1.66
VMA10	YHR039C-A	ARI1	P53111	347 aa	Known RBP	4.66	□□□□□ -1.66
VMA10	YHR039C-A	UTP22	P53254	1237 aa	Predicted RBP	4.66	□□□□□ -1.66
VMA10	YHR039C-A	YGR122W	P53272	402 aa		4.66	□□□□□ -1.66
VMA10	YHR039C-A	FAR11	P53917	953 aa		4.66	□□□□□ -1.66
VMA10	YHR039C-A	NOG1	Q02892	647 aa	Known RBP	4.66	□□□□□ -1.66
VMA10	YHR039C-A	YPL109C	Q02981	657 aa		4.66	□□□□□ -1.66
VMA10	YHR039C-A	SVF1	Q05515	481 aa		4.66	□□□□□ -1.66
VMA10	YHR039C-A	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-DR6	P0CX70	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-ER1	P0CX71	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-LR2	P0CX72	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-PL	P0CX73	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-JR1	P0CX74	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-LR3	P0CX75	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-ML2	P0CX76	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	RSC6	P25632	483 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	EXO5	P38289	585 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	RPS26A	P39938	119 aa	Known RBP	4.65	□□□□□ -1.67
VMA10	YHR039C-A	RPS26B	P39939	119 aa	Known RBP	4.65	□□□□□ -1.67
VMA10	YHR039C-A	FYV10	P40492	516 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	GCV1	P48015	400 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	KIP3	P53086	805 aa	Known RBP	4.65	□□□□□ -1.67
VMA10	YHR039C-A	NCE103	P53615	221 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	YMR074C	Q04773	145 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-GR1	Q12085	440 aa		4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.65	□□□□□ -1.67
VMA10	YHR039C-A	TY1A-OL	Q92392	440 aa	Known RBP	4.65	□□□□□ -1.67
VMA10	YHR039C-A	YKL077W	P36081	392 aa		4.64	□□□□□ -1.67
VMA10	YHR039C-A	SHU2	P38957	223 aa		4.64	□□□□□ -1.67
VMA10	YHR039C-A	LSB3	P43603	459 aa	Known RBP	4.64	□□□□□ -1.67
VMA10	YHR039C-A	RSM26	P47141	266 aa		4.64	□□□□□ -1.67
VMA10	YHR039C-A	MEC3	Q02574	474 aa		4.64	□□□□□ -1.67
VMA10	YHR039C-A	ADI1	Q03677	179 aa		4.64	□□□□□ -1.67
VMA10	YHR039C-A	SPR28	Q04921	423 aa		4.64	□□□□□ -1.67
VMA10	YHR039C-A	CYC8	P14922	966 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	MSH3	P25336	1018 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	SQT1	P35184	431 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	PIC2	P40035	300 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	PEX13	P80667	386 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	YPL034W	Q03083	165 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	REC8	Q12188	680 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	YLL054C	Q12244	843 aa		4.63	□□□□□ -1.67
VMA10	YHR039C-A	RAD2	P07276	1031 aa		4.62	□□□□□ -1.67
VMA10	YHR039C-A	REI1	P38344	393 aa	Predicted RBP	4.62	□□□□□ -1.67
VMA10	YHR039C-A	PEX28	P38848	579 aa		4.62	□□□□□ -1.67
VMA10	YHR039C-A	MRPS18	P42847	217 aa		4.62	□□□□□ -1.67
VMA10	YHR039C-A	SLS1	P42900	643 aa		4.62	□□□□□ -1.67
VMA10	YHR039C-A	MCD1	Q12158	566 aa		4.62	□□□□□ -1.67
VMA10	YHR039C-A	PRE9	P23638	258 aa	Known RBP	4.61	□□□□□ -1.67
VMA10	YHR039C-A	NAM7	P30771	971 aa	Known RBP	4.61	□□□□□ -1.67
VMA10	YHR039C-A	ARL1	P38116	183 aa	Known RBP	4.61	□□□□□ -1.67
VMA10	YHR039C-A	NEM1	P38757	446 aa		4.61	□□□□□ -1.67
VMA10	YHR039C-A	YGL140C	P53120	1219 aa		4.61	□□□□□ -1.67
VMA10	YHR039C-A	ALG6	Q12001	544 aa	Known RBP	4.61	□□□□□ -1.67
VMA10	YHR039C-A	YOR223W	Q12015	292 aa		4.61	□□□□□ -1.67
VMA10	YHR039C-A	HEM13	P11353	328 aa	Known RBP	4.6	□□□□□ -1.67
VMA10	YHR039C-A	PGM1	P33401	570 aa	Known RBP	4.6	□□□□□ -1.67
VMA10	YHR039C-A	DOT1	Q04089	582 aa	Known RBP	4.6	□□□□□ -1.67
VMA10	YHR039C-A	VMA4	P22203	233 aa	Known RBP	4.59	□□□□□ -1.67
VMA10	YHR039C-A	PEP7	P32609	515 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	GPT2	P36148	743 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	RDH54	P38086	958 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	AKR1	P39010	764 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	YGR045C	P53229	120 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	RMD1	Q03441	430 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	UTP5	Q04177	643 aa	Known RBP	4.59	□□□□□ -1.67
VMA10	YHR039C-A	AIM44	Q99299	758 aa		4.59	□□□□□ -1.67
VMA10	YHR039C-A	MTR4	P47047	1073 aa	Known RBP	4.58	□□□□□ -1.68
VMA10	YHR039C-A	JIP5	Q06214	492 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA10	YHR039C-A	MAG2	Q06436	670 aa	Known RBP	4.58	□□□□□ -1.68
VMA10	YHR039C-A	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VMA10	YHR039C-A	SEC23	P15303	768 aa	Known RBP	4.57	□□□□□ -1.68
VMA10	YHR039C-A	COQ2	P32378	372 aa		4.57	□□□□□ -1.68
VMA10	YHR039C-A	SAF1	P38352	637 aa		4.57	□□□□□ -1.68
VMA10	YHR039C-A	SPO74	P45819	413 aa		4.57	□□□□□ -1.68
VMA10	YHR039C-A	ELA1	P53861	379 aa	Predicted RBP	4.57	□□□□□ -1.68
VMA10	YHR039C-A	ESF1	Q06344	628 aa	Known RBP	4.57	□□□□□ -1.68
VMA10	YHR039C-A	GIC2	Q06648	383 aa		4.57	□□□□□ -1.68
VMA10	YHR039C-A	AVO1	Q08236	1176 aa		4.57	□□□□□ -1.68
VMA10	YHR039C-A	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
VMA10	YHR039C-A	NAP1	P25293	417 aa	Known RBP	4.56	□□□□□ -1.68
VMA10	YHR039C-A	OCA5	P38738	679 aa		4.56	□□□□□ -1.68
VMA10	YHR039C-A	MSH4	P40965	878 aa	Predicted RBP	4.56	□□□□□ -1.68
VMA10	YHR039C-A	XKS1	P42826	600 aa		4.56	□□□□□ -1.68
VMA10	YHR039C-A	YLR122C	Q12312	125 aa		4.56	□□□□□ -1.68
VMA10	YHR039C-A	GCR1	P07261	785 aa		4.55	□□□□□ -1.68
VMA10	YHR039C-A	YAR028W	P39548	234 aa		4.55	□□□□□ -1.68
VMA10	YHR039C-A	YNR063W	P53749	607 aa		4.55	□□□□□ -1.68
VMA10	YHR039C-A	EST2	Q06163	884 aa		4.55	□□□□□ -1.68
VMA10	YHR039C-A	HDA2	Q06629	674 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms