RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C FLP1P03870 423 aa5.8□□□□□ -1.48
SRB5YGR104C ELM1P32801 640 aa5.8□□□□□ -1.48
SRB5YGR104C YFR016CP43597 1233 aaKnown RBP5.8□□□□□ -1.48
SRB5YGR104C UTP22P53254 1237 aaPredicted RBP5.8□□□□□ -1.48
SRB5YGR104C DOT1Q04089 582 aaKnown RBP5.8□□□□□ -1.48
SRB5YGR104C COBP00163 385 aa5.79□□□□□ -1.48
SRB5YGR104C RVS167P39743 482 aaKnown RBP5.79□□□□□ -1.48
SRB5YGR104C MNL2Q12205 849 aa5.79□□□□□ -1.48
SRB5YGR104C SHU2P38957 223 aa5.78□□□□□ -1.48
SRB5YGR104C SAM37P50110 327 aa5.78□□□□□ -1.48
SRB5YGR104C GPT2P36148 743 aa5.77□□□□□ -1.49
SRB5YGR104C NUT1P53114 1132 aa5.77□□□□□ -1.49
SRB5YGR104C GRS1P38088 690 aaKnown RBP5.76□□□□□ -1.49
SRB5YGR104C REI1P38344 393 aaPredicted RBP5.76□□□□□ -1.49
SRB5YGR104C CIC1P38779 376 aaKnown RBP5.76□□□□□ -1.49
SRB5YGR104C KRI1P42846 591 aaKnown RBP5.76□□□□□ -1.49
SRB5YGR104C ECL1P48235 211 aa5.76□□□□□ -1.49
SRB5YGR104C YAF9P53930 226 aa5.76□□□□□ -1.49
SRB5YGR104C RCM1P53972 490 aa5.76□□□□□ -1.49
SRB5YGR104C YBL113CQ7M4S9 792 aa5.76□□□□□ -1.49
SRB5YGR104C MDJ2P42834 146 aa5.75□□□□□ -1.49
SRB5YGR104C NOC3Q07896 663 aaPredicted RBP5.75□□□□□ -1.49
SRB5YGR104C DUR3P33413 735 aa5.74□□□□□ -1.49
SRB5YGR104C YKL077WP36081 392 aa5.74□□□□□ -1.49
SRB5YGR104C ERP5P38819 212 aa5.74□□□□□ -1.49
SRB5YGR104C RPS4AP0CX35 261 aaKnown RBP5.73□□□□□ -1.49
SRB5YGR104C RPS4BP0CX36 261 aaKnown RBP5.73□□□□□ -1.49
SRB5YGR104C MCM5P29496 775 aaKnown RBP5.73□□□□□ -1.49
SRB5YGR104C WHI3P34761 661 aaKnown RBP5.73□□□□□ -1.49
SRB5YGR104C NNK1P36003 928 aa5.73□□□□□ -1.49
SRB5YGR104C NIT1P40447 199 aa5.73□□□□□ -1.49
SRB5YGR104C ALT1P52893 592 aa5.73□□□□□ -1.49
SRB5YGR104C INP54Q08227 384 aaKnown RBP5.73□□□□□ -1.49
SRB5YGR104C HAT1Q12341 374 aa5.73□□□□□ -1.49
SRB5YGR104C MSH4P40965 878 aaPredicted RBP5.72□□□□□ -1.49
SRB5YGR104C YCS4Q06156 1176 aa5.72□□□□□ -1.49
SRB5YGR104C AVO1Q08236 1176 aa5.72□□□□□ -1.49
SRB5YGR104C GCD1P09032 578 aaPredicted RBP5.71□□□□□ -1.5
SRB5YGR104C GCD6P32501 712 aaKnown RBP5.71□□□□□ -1.5
SRB5YGR104C SMY2P32909 740 aaKnown RBP5.71□□□□□ -1.5
SRB5YGR104C MNN4P36044 1178 aa5.71□□□□□ -1.5
SRB5YGR104C NUT2Q06213 157 aa5.71□□□□□ -1.5
SRB5YGR104C ADP1P25371 1049 aa5.7□□□□□ -1.5
SRB5YGR104C OYE3P41816 400 aaPredicted RBP5.7□□□□□ -1.5
SRB5YGR104C ORC3P54790 616 aa5.7□□□□□ -1.5
SRB5YGR104C SDH1Q00711 640 aa5.7□□□□□ -1.5
SRB5YGR104C PRP43P53131 767 aaKnown RBP5.69□□□□□ -1.5
SRB5YGR104C DFG16Q99234 619 aa5.69□□□□□ -1.5
SRB5YGR104C FRT1Q99332 602 aa5.69□□□□□ -1.5
SRB5YGR104C KAR2P16474 682 aaKnown RBP5.68□□□□□ -1.5
SRB5YGR104C NFS1P25374 497 aa5.68□□□□□ -1.5
SRB5YGR104C VPS35P34110 944 aa5.68□□□□□ -1.5
SRB5YGR104C POL12P38121 705 aaPredicted RBP5.68□□□□□ -1.5
SRB5YGR104C HSE1P38753 452 aa5.68□□□□□ -1.5
SRB5YGR104C RPS0BP46654 252 aaKnown RBP5.68□□□□□ -1.5
SRB5YGR104C MTR4P47047 1073 aaKnown RBP5.68□□□□□ -1.5
SRB5YGR104C YGR045CP53229 120 aa5.68□□□□□ -1.5
SRB5YGR104C NOG1Q02892 647 aaKnown RBP5.68□□□□□ -1.5
SRB5YGR104C TRE1Q08919 783 aa5.68□□□□□ -1.5
SRB5YGR104C EXO5P38289 585 aa5.67□□□□□ -1.5
SRB5YGR104C UBP5P39944 805 aa5.67□□□□□ -1.5
SRB5YGR104C GPI13Q07830 1017 aa5.67□□□□□ -1.5
SRB5YGR104C ALG6Q12001 544 aaKnown RBP5.67□□□□□ -1.5
SRB5YGR104C YVC1Q12324 675 aa5.67□□□□□ -1.5
SRB5YGR104C ATG14P38270 344 aa5.66□□□□□ -1.5
SRB5YGR104C STM1P39015 273 aaKnown RBP5.66□□□□□ -1.5
SRB5YGR104C MON1P53129 644 aa5.66□□□□□ -1.5
SRB5YGR104C ELA1P53861 379 aaPredicted RBP5.66□□□□□ -1.5
SRB5YGR104C YML020WQ03722 664 aa5.66□□□□□ -1.5
SRB5YGR104C TY1A-LR4P0C2I8 440 aaKnown RBP5.65□□□□□ -1.5
SRB5YGR104C TY1A-DR6P0CX70 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-ER1P0CX71 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-LR2P0CX72 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-PLP0CX73 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-JR1P0CX74 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-LR3P0CX75 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-ML2P0CX76 440 aa5.65□□□□□ -1.5
SRB5YGR104C VMA4P22203 233 aaKnown RBP5.65□□□□□ -1.5
SRB5YGR104C HSP78P33416 811 aa5.65□□□□□ -1.5
SRB5YGR104C PPX1P38698 397 aa5.65□□□□□ -1.5
SRB5YGR104C LAP2Q10740 671 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-GR1Q12085 440 aa5.65□□□□□ -1.5
SRB5YGR104C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.65□□□□□ -1.5
SRB5YGR104C TY1A-OLQ92392 440 aaKnown RBP5.65□□□□□ -1.5
SRB5YGR104C RNQ1P25367 405 aa5.64□□□□□ -1.51
SRB5YGR104C SEG2P34250 1132 aa5.64□□□□□ -1.51
SRB5YGR104C LRG1P35688 1017 aa5.64□□□□□ -1.51
SRB5YGR104C YHL050CP38721 697 aa5.64□□□□□ -1.51
SRB5YGR104C YHR219WP38900 624 aa5.64□□□□□ -1.51
SRB5YGR104C YAR028WP39548 234 aa5.64□□□□□ -1.51
SRB5YGR104C NOP8Q08287 484 aaPredicted RBP5.64□□□□□ -1.51
SRB5YGR104C EBP2P36049 427 aaKnown RBP5.63□□□□□ -1.51
SRB5YGR104C SEA4P38164 1038 aa5.63□□□□□ -1.51
SRB5YGR104C MDG1P53885 366 aa5.63□□□□□ -1.51
SRB5YGR104C HRK1Q08732 759 aaKnown RBP5.63□□□□□ -1.51
SRB5YGR104C OXR1Q08952 273 aa5.63□□□□□ -1.51
SRB5YGR104C SWE1P32944 819 aa5.62□□□□□ -1.51
SRB5YGR104C PRP40P33203 583 aaKnown RBP5.62□□□□□ -1.51
SRB5YGR104C SSF1P38789 453 aaPredicted RBP5.62□□□□□ -1.51
SRB5YGR104C PEX7P39108 375 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms