RNA–Protein interactions for RNA: YGL140C

YGL140C, Transcript of Putative protein of unknown function, yeast

Gene YGL140C, Length 3,660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL140C	YGL140C	MRF1	P30775	413 aa	Predicted RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	SEC6	P32844	805 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	SPT8	P38915	602 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	YGR122W	P53272	402 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	CUS1	Q02554	436 aa	Predicted RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	MAK21	Q12176	1025 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	YSP2	Q06681	1438 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	UBC1	P21734	215 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	RPG1	P38249	964 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	YNG2	P38806	282 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	TAF8	Q03750	510 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	CSI1	Q04368	295 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	YDR341C	Q05506	607 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	YOR389W	Q08912	624 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	IOC2	Q12072	812 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	AIM7	Q12156	149 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	CDC11	P32458	415 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YGL140C	YGL140C	ECM4	P36156	370 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	PSY4	P38193	441 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	CTF18	P49956	741 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	YPR097W	Q06839	1073 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YGL140C	YGL140C	STB3	Q12427	513 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	PMR1	P13586	950 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	MRPS28	P21771	286 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	PTH2	P34222	208 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	ABZ1	P37254	787 aa	Predicted RBP	4.09	□□□□□ -1.75
YGL140C	YGL140C	APT1	P49435	187 aa	Known RBP	4.09	□□□□□ -1.75
YGL140C	YGL140C	YOL098C	Q12496	1037 aa		4.09	□□□□□ -1.75
YGL140C	YGL140C	RAD1	P06777	1100 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	MPH2	P0CD99	609 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	MPH3	P0CE00	602 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	UBP1	P25037	809 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	KAR9	P32526	644 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	STO1	P34160	861 aa	Known RBP	4.09	□□□□□ -1.76
YGL140C	YGL140C	PRP43	P53131	767 aa	Known RBP	4.09	□□□□□ -1.76
YGL140C	YGL140C	SFB2	P53953	876 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	MDM1	Q01846	1127 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	TMA64	Q04600	565 aa	Known RBP	4.09	□□□□□ -1.76
YGL140C	YGL140C	YOR296W	Q08748	1289 aa		4.09	□□□□□ -1.76
YGL140C	YGL140C	CDC37	P06101	506 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	IME1	P21190	360 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	GTT3	P39996	337 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	BUD6	P41697	788 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	MIC19	P43594	170 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	YJR079W	P47126	109 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	CAF130	P53280	1122 aa	Predicted RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	YKU80	Q04437	629 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	SMC6	Q12749	1114 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	NTE1	Q04958	1679 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	RPO41	P13433	1351 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	USO1	P25386	1790 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	CPA2	P03965	1118 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	RPL19A	P0CX82	189 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	RPL19B	P0CX83	189 aa	Predicted RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	HCA4	P20448	770 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	PPH3	P32345	308 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	CCT4	P39078	528 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	JJJ1	P53863	590 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	ARR1	Q06596	294 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	ATG23	Q06671	453 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	ISW2	Q08773	1120 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	ATG9	Q12142	997 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	RIB2	Q12362	591 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	CHC1	P22137	1653 aa	Known RBP	4.08	□□□□□ -1.76
YGL140C	YGL140C	KAR1	P11927	433 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	PPG1	P32838	368 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	HUL4	P40985	892 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	YFR006W	P43590	535 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	YJL007C	P47080	104 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	ITT1	Q04638	464 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	YLR177W	Q06251	628 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	GGA1	Q06336	557 aa		4.08	□□□□□ -1.76
YGL140C	YGL140C	THS1	P04801	734 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	KAR2	P16474	682 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	ATO2	P32907	282 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	MUM2	P38236	366 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	IES2	P40154	320 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	MET7	Q08645	548 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	PBS2	P08018	668 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	RAD53	P22216	821 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	MUD2	P36084	527 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	YKR023W	P36119	530 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	PIM1	P36775	1133 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	MRX1	P40050	688 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	BNA1	P47096	177 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	TSR2	Q06672	205 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	DBP10	Q12389	995 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	RPL17A	P05740	184 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	PIF1	P07271	859 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	GSY2	P27472	705 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	SWC3	P31376	625 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	LOS1	P33418	1100 aa	Predicted RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	VID28	P40547	921 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	RPL17B	P46990	184 aa	Known RBP	4.07	□□□□□ -1.76
YGL140C	YGL140C	VPS53	P47061	822 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	YPL109C	Q02981	657 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	MSH6	Q03834	1242 aa		4.07	□□□□□ -1.76
YGL140C	YGL140C	MMR1	Q06324	491 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 109.8 ms