RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LIF1	YGL090W	TAF1	P46677	1066 aa		4.68	□□□□□ -1.66
LIF1	YGL090W	ATG1	P53104	897 aa		4.68	□□□□□ -1.66
LIF1	YGL090W	DOT1	Q04089	582 aa	Known RBP	4.68	□□□□□ -1.66
LIF1	YGL090W	YOR059C	Q08448	450 aa	Known RBP	4.68	□□□□□ -1.66
LIF1	YGL090W	MNL2	Q12205	849 aa		4.68	□□□□□ -1.66
LIF1	YGL090W	GRS1	P38088	690 aa	Known RBP	4.67	□□□□□ -1.66
LIF1	YGL090W	RCM1	P53972	490 aa		4.67	□□□□□ -1.66
LIF1	YGL090W	TRS120	Q04183	1289 aa		4.67	□□□□□ -1.66
LIF1	YGL090W	CDA2	Q06703	312 aa		4.67	□□□□□ -1.66
LIF1	YGL090W	HTS1	P07263	546 aa	Known RBP	4.66	□□□□□ -1.66
LIF1	YGL090W	YNL011C	P53980	444 aa		4.66	□□□□□ -1.66
LIF1	YGL090W	TRL1	P09880	827 aa	Known RBP	4.65	□□□□□ -1.67
LIF1	YGL090W	TSA1	P34760	196 aa	Known RBP	4.65	□□□□□ -1.67
LIF1	YGL090W	MON1	P53129	644 aa		4.65	□□□□□ -1.67
LIF1	YGL090W	GIS1	Q03833	894 aa		4.65	□□□□□ -1.67
LIF1	YGL090W	BSC2	Q05611	235 aa		4.65	□□□□□ -1.67
LIF1	YGL090W	YIG1	Q08956	461 aa		4.65	□□□□□ -1.67
LIF1	YGL090W	ERP5	P38819	212 aa		4.64	□□□□□ -1.67
LIF1	YGL090W	ACF4	P47129	309 aa		4.64	□□□□□ -1.67
LIF1	YGL090W	GCV1	P48015	400 aa		4.64	□□□□□ -1.67
LIF1	YGL090W	YRB30	P53107	440 aa	Predicted RBP	4.64	□□□□□ -1.67
LIF1	YGL090W	EAR1	Q03212	550 aa		4.64	□□□□□ -1.67
LIF1	YGL090W	INP54	Q08227	384 aa	Known RBP	4.64	□□□□□ -1.67
LIF1	YGL090W	FRT1	Q99332	602 aa		4.64	□□□□□ -1.67
LIF1	YGL090W	FLP1	P03870	423 aa		4.63	□□□□□ -1.67
LIF1	YGL090W	SSA1	P10591	642 aa	Known RBP	4.63	□□□□□ -1.67
LIF1	YGL090W	THI80	P35202	319 aa		4.63	□□□□□ -1.67
LIF1	YGL090W	MDJ2	P42834	146 aa		4.63	□□□□□ -1.67
LIF1	YGL090W	GPI13	Q07830	1017 aa		4.63	□□□□□ -1.67
LIF1	YGL090W	YLL054C	Q12244	843 aa		4.63	□□□□□ -1.67
LIF1	YGL090W	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67
LIF1	YGL090W	TOP1	P04786	769 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	RPS4A	P0CX35	261 aa	Known RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	RPS4B	P0CX36	261 aa	Known RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-DR6	P0CX70	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-ER1	P0CX71	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-LR2	P0CX72	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-PL	P0CX73	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-JR1	P0CX74	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-LR3	P0CX75	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-ML2	P0CX76	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	PRP5	P21372	849 aa	Predicted RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	REI1	P38344	393 aa	Predicted RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	UTP22	P53254	1237 aa	Predicted RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	CDC55	Q00362	526 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-GR1	Q12085	440 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	HAT1	Q12341	374 aa		4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	TY1A-OL	Q92392	440 aa	Known RBP	4.62	□□□□□ -1.67
LIF1	YGL090W	ADP1	P25371	1049 aa		4.61	□□□□□ -1.67
LIF1	YGL090W	MCM5	P29496	775 aa	Known RBP	4.61	□□□□□ -1.67
LIF1	YGL090W	MSH4	P40965	878 aa	Predicted RBP	4.61	□□□□□ -1.67
LIF1	YGL090W	OYE3	P41816	400 aa	Predicted RBP	4.61	□□□□□ -1.67
LIF1	YGL090W	NUT1	P53114	1132 aa		4.61	□□□□□ -1.67
LIF1	YGL090W	ELA1	P53861	379 aa	Predicted RBP	4.61	□□□□□ -1.67
LIF1	YGL090W	MEC3	Q02574	474 aa		4.61	□□□□□ -1.67
LIF1	YGL090W	MSH6	Q03834	1242 aa		4.61	□□□□□ -1.67
LIF1	YGL090W	CDC3	P32457	520 aa	Known RBP	4.6	□□□□□ -1.67
LIF1	YGL090W	YAF9	P53930	226 aa		4.6	□□□□□ -1.67
LIF1	YGL090W	HDA2	Q06629	674 aa		4.6	□□□□□ -1.67
LIF1	YGL090W	NOP8	Q08287	484 aa	Predicted RBP	4.6	□□□□□ -1.67
LIF1	YGL090W	PRP6	P19735	899 aa	Predicted RBP	4.59	□□□□□ -1.67
LIF1	YGL090W	YGR045C	P53229	120 aa		4.59	□□□□□ -1.67
LIF1	YGL090W	NUT2	Q06213	157 aa		4.59	□□□□□ -1.67
LIF1	YGL090W	FLR1	P38124	548 aa		4.58	□□□□□ -1.68
LIF1	YGL090W	NMD3	P38861	518 aa	Known RBP	4.58	□□□□□ -1.68
LIF1	YGL090W	SAP155	P43612	1002 aa		4.58	□□□□□ -1.68
LIF1	YGL090W	ORC3	P54790	616 aa		4.58	□□□□□ -1.68
LIF1	YGL090W	NFS1	P25374	497 aa		4.57	□□□□□ -1.68
LIF1	YGL090W	SLS1	P42900	643 aa		4.57	□□□□□ -1.68
LIF1	YGL090W	ALT1	P52893	592 aa		4.57	□□□□□ -1.68
LIF1	YGL090W	YML020W	Q03722	664 aa		4.57	□□□□□ -1.68
LIF1	YGL090W	SSY1	Q03770	852 aa		4.57	□□□□□ -1.68
LIF1	YGL090W	PMT7	Q06644	662 aa		4.57	□□□□□ -1.68
LIF1	YGL090W	NOC3	Q07896	663 aa	Predicted RBP	4.56	□□□□□ -1.68
LIF1	YGL090W	AVO1	Q08236	1176 aa		4.56	□□□□□ -1.68
LIF1	YGL090W	TRE1	Q08919	783 aa		4.56	□□□□□ -1.68
LIF1	YGL090W	YVC1	Q12324	675 aa		4.56	□□□□□ -1.68
LIF1	YGL090W	UGA4	P32837	571 aa		4.55	□□□□□ -1.68
LIF1	YGL090W	GEF1	P37020	779 aa		4.55	□□□□□ -1.68
LIF1	YGL090W	PRO1	P32264	428 aa		4.54	□□□□□ -1.68
LIF1	YGL090W	EXO5	P38289	585 aa		4.54	□□□□□ -1.68
LIF1	YGL090W	NEM1	P38757	446 aa		4.54	□□□□□ -1.68
LIF1	YGL090W	RVS167	P39743	482 aa	Known RBP	4.54	□□□□□ -1.68
LIF1	YGL090W	SMY2	P32909	740 aa	Known RBP	4.53	□□□□□ -1.68
LIF1	YGL090W	YKL077W	P36081	392 aa		4.53	□□□□□ -1.68
LIF1	YGL090W	AIM3	P38266	947 aa	Known RBP	4.53	□□□□□ -1.68
LIF1	YGL090W	PTC7	P38797	343 aa		4.53	□□□□□ -1.68
LIF1	YGL090W	PEX7	P39108	375 aa		4.53	□□□□□ -1.68
LIF1	YGL090W	YHL050C	P38721	697 aa		4.52	□□□□□ -1.69
LIF1	YGL090W	YHR219W	P38900	624 aa		4.52	□□□□□ -1.69
LIF1	YGL090W	GTS1	P40956	396 aa		4.52	□□□□□ -1.69
LIF1	YGL090W	NOP7	P53261	605 aa	Known RBP	4.52	□□□□□ -1.69
LIF1	YGL090W	LPX1	Q12405	387 aa	Known RBP	4.52	□□□□□ -1.69
LIF1	YGL090W	SAM37	P50110	327 aa		4.51	□□□□□ -1.69
LIF1	YGL090W	RIM8	P53179	542 aa		4.51	□□□□□ -1.69
LIF1	YGL090W	YNR063W	P53749	607 aa		4.51	□□□□□ -1.69
LIF1	YGL090W	MRPL22	P53881	309 aa		4.51	□□□□□ -1.69
LIF1	YGL090W	PEX13	P80667	386 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms