RNA–Protein interactions for RNA: YGL085W

LCL3, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL3, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL3YGL085W SOL4P53315 255 aa7.84□□□□□ -1.15
LCL3YGL085W VMA2P16140 517 aaKnown RBP7.83□□□□□ -1.16
LCL3YGL085W SAM2P19358 384 aaKnown RBP7.83□□□□□ -1.16
LCL3YGL085W MYO3P36006 1272 aa7.83□□□□□ -1.16
LCL3YGL085W GPB2P39717 880 aa7.83□□□□□ -1.16
LCL3YGL085W SSF2Q12153 453 aaPredicted RBP7.83□□□□□ -1.16
LCL3YGL085W ECM29P38737 1868 aa7.83□□□□□ -1.16
LCL3YGL085W VAS1P07806 1104 aaKnown RBP7.82□□□□□ -1.16
LCL3YGL085W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
LCL3YGL085W AAP1P37898 856 aaKnown RBP7.82□□□□□ -1.16
LCL3YGL085W PES4P39684 611 aa7.82□□□□□ -1.16
LCL3YGL085W ICL2Q12031 575 aa7.82□□□□□ -1.16
LCL3YGL085W RAD18P10862 487 aa7.81□□□□□ -1.16
LCL3YGL085W ACE2P21192 770 aa7.81□□□□□ -1.16
LCL3YGL085W RIT1P23796 513 aa7.81□□□□□ -1.16
LCL3YGL085W ANP1P32629 500 aa7.81□□□□□ -1.16
LCL3YGL085W UBP9P39967 754 aa7.81□□□□□ -1.16
LCL3YGL085W MXR1P40029 184 aa7.81□□□□□ -1.16
LCL3YGL085W YAF9P53930 226 aa7.81□□□□□ -1.16
LCL3YGL085W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
LCL3YGL085W PRE10P21242 288 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
LCL3YGL085W YKR018CP36114 725 aa7.8□□□□□ -1.16
LCL3YGL085W CRG1P38892 291 aaRIP-Chip data7.8□□□□□ -1.16 RIP-Chip
LCL3YGL085W VPS62P53285 467 aa7.8□□□□□ -1.16
LCL3YGL085W FOL1P53848 824 aa7.8□□□□□ -1.16
LCL3YGL085W ALD6P54115 500 aaKnown RBP7.8□□□□□ -1.16
LCL3YGL085W SPN1Q06505 410 aaPredicted RBP7.8□□□□□ -1.16
LCL3YGL085W PHO88P38264 188 aaPredicted RBP7.79□□□□□ -1.16
LCL3YGL085W HDA1P53973 706 aa7.79□□□□□ -1.16
LCL3YGL085W VPS30Q02948 557 aa7.79□□□□□ -1.16
LCL3YGL085W DUS4Q06063 367 aa7.79□□□□□ -1.16
LCL3YGL085W FPR4Q06205 392 aaPredicted RBP7.79□□□□□ -1.16
LCL3YGL085W MET7Q08645 548 aa7.79□□□□□ -1.16
LCL3YGL085W CDC19P00549 500 aaKnown RBP7.78□□□□□ -1.16
LCL3YGL085W NUC1P08466 329 aa7.78□□□□□ -1.16
LCL3YGL085W UTR4P32626 227 aa7.78□□□□□ -1.16
LCL3YGL085W RGT1P32862 1170 aa7.78□□□□□ -1.16
LCL3YGL085W RER2P35196 286 aa7.78□□□□□ -1.16
LCL3YGL085W LDH1P38139 375 aa7.78□□□□□ -1.16
LCL3YGL085W PTK2P47116 818 aaKnown RBP7.78□□□□□ -1.16
LCL3YGL085W YGR125WP53273 1036 aa7.78□□□□□ -1.16
LCL3YGL085W SAM1P10659 382 aaKnown RBP7.77□□□□□ -1.17
LCL3YGL085W RPL8BP29453 256 aaKnown RBP7.77□□□□□ -1.17
LCL3YGL085W TGL1P34163 548 aa7.77□□□□□ -1.17
LCL3YGL085W BRN1P38170 754 aa7.77□□□□□ -1.17
LCL3YGL085W VPS45P38932 577 aa7.77□□□□□ -1.17
LCL3YGL085W AIM21P40563 679 aa7.77□□□□□ -1.17
LCL3YGL085W RPT6Q01939 405 aaKnown RBP7.77□□□□□ -1.17
LCL3YGL085W MYO5Q04439 1219 aaKnown RBP7.77□□□□□ -1.17
LCL3YGL085W SUT2Q12286 268 aa7.77□□□□□ -1.17
LCL3YGL085W CLF1Q12309 687 aaPredicted RBP7.77□□□□□ -1.17
LCL3YGL085W YOR131CQ12486 218 aa7.77□□□□□ -1.17
LCL3YGL085W MYO1P08964 1928 aa7.76□□□□□ -1.17
LCL3YGL085W TPM1P17536 199 aaKnown RBP7.76□□□□□ -1.17
LCL3YGL085W MAK31P23059 88 aa7.76□□□□□ -1.17
LCL3YGL085W SRP40P32583 406 aaPredicted RBP7.76□□□□□ -1.17
LCL3YGL085W MAL31P38156 614 aa7.76□□□□□ -1.17
LCL3YGL085W TOM71P38825 639 aaKnown RBP7.76□□□□□ -1.17
LCL3YGL085W BRE5P53741 515 aaKnown RBP7.76□□□□□ -1.17
LCL3YGL085W TMA64Q04600 565 aaKnown RBP7.76□□□□□ -1.17
LCL3YGL085W SPH1Q06160 661 aa7.76□□□□□ -1.17
LCL3YGL085W CSC1Q06538 782 aa7.76□□□□□ -1.17
LCL3YGL085W IMP2'P32351 346 aa7.75□□□□□ -1.17
LCL3YGL085W CIC1P38779 376 aaKnown RBP7.75□□□□□ -1.17
LCL3YGL085W AFG3P39925 761 aa7.75□□□□□ -1.17
LCL3YGL085W CSM2P40465 213 aa7.75□□□□□ -1.17
LCL3YGL085W YJR107WP47145 328 aa7.75□□□□□ -1.17
LCL3YGL085W GCR2Q01722 534 aa7.75□□□□□ -1.17
LCL3YGL085W BUL2Q03758 920 aaKnown RBP7.75□□□□□ -1.17
LCL3YGL085W TFC6Q06339 672 aa7.75□□□□□ -1.17
LCL3YGL085W SUE1Q06524 206 aa7.75□□□□□ -1.17
LCL3YGL085W UTP4Q06679 776 aaKnown RBP7.75□□□□□ -1.17
LCL3YGL085W SRP54P20424 541 aaKnown RBP7.74□□□□□ -1.17
LCL3YGL085W PEP3P27801 918 aa7.74□□□□□ -1.17
LCL3YGL085W SHP1P34223 423 aa7.74□□□□□ -1.17
LCL3YGL085W CDC27P38042 758 aa7.74□□□□□ -1.17
LCL3YGL085W VPS29P38759 282 aa7.74□□□□□ -1.17
LCL3YGL085W DUS3Q06053 668 aaKnown RBP7.74□□□□□ -1.17
LCL3YGL085W ECM30Q06673 1274 aa7.74□□□□□ -1.17
LCL3YGL085W MDM20Q12387 796 aaKnown RBP7.74□□□□□ -1.17
LCL3YGL085W PGA3Q12746 312 aaKnown RBP7.74□□□□□ -1.17
LCL3YGL085W BCS1P32839 456 aa7.73□□□□□ -1.17
LCL3YGL085W MCR1P36060 302 aaKnown RBP7.73□□□□□ -1.17
LCL3YGL085W UIP5P36137 443 aa7.73□□□□□ -1.17
LCL3YGL085W ALG2P43636 503 aa7.73□□□□□ -1.17
LCL3YGL085W LSB1P53281 241 aa7.73□□□□□ -1.17
LCL3YGL085W HXT17P53631 564 aa7.73□□□□□ -1.17
LCL3YGL085W EST2Q06163 884 aa7.73□□□□□ -1.17
LCL3YGL085W GUD1Q07729 489 aa7.73□□□□□ -1.17
LCL3YGL085W SEC20P28791 383 aa7.72□□□□□ -1.17
LCL3YGL085W KSP1P38691 1029 aaKnown RBP7.72□□□□□ -1.17
LCL3YGL085W MDM1Q01846 1127 aa7.72□□□□□ -1.17
LCL3YGL085W SLD5Q03406 294 aa7.72□□□□□ -1.17
LCL3YGL085W ERP3Q12403 225 aa7.72□□□□□ -1.17
LCL3YGL085W PHR1P05066 565 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
LCL3YGL085W DBP1P24784 617 aaKnown RBP7.71□□□□□ -1.18
LCL3YGL085W YUR1P26725 428 aa7.71□□□□□ -1.18
LCL3YGL085W NDT80P38830 627 aa7.71□□□□□ -1.18
LCL3YGL085W HXT13P39924 564 aa7.71□□□□□ -1.18
LCL3YGL085W CLA4P48562 842 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms