RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C GLT1Q12680 2145 aaKnown RBP5.62□□□□□ -1.51
PGD1YGL025C RPT1P33299 467 aaKnown RBP5.61□□□□□ -1.51
PGD1YGL025C UTP22P53254 1237 aaPredicted RBP5.61□□□□□ -1.51
PGD1YGL025C FAR11P53917 953 aa5.61□□□□□ -1.51
PGD1YGL025C TY1A-LR4P0C2I8 440 aaKnown RBP5.6□□□□□ -1.51
PGD1YGL025C TY1A-DR6P0CX70 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-ER1P0CX71 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-LR2P0CX72 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-PLP0CX73 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-JR1P0CX74 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-LR3P0CX75 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-ML2P0CX76 440 aa5.6□□□□□ -1.51
PGD1YGL025C POL32P47110 350 aa5.6□□□□□ -1.51
PGD1YGL025C GCV1P48015 400 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-GR1Q12085 440 aa5.6□□□□□ -1.51
PGD1YGL025C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.6□□□□□ -1.51
PGD1YGL025C TY1A-OLQ92392 440 aaKnown RBP5.6□□□□□ -1.51
PGD1YGL025C EXO5P38289 585 aa5.59□□□□□ -1.51
PGD1YGL025C FAA3P39002 694 aa5.59□□□□□ -1.51
PGD1YGL025C MEC3Q02574 474 aa5.59□□□□□ -1.51
PGD1YGL025C ULP1Q02724 621 aa5.59□□□□□ -1.51
PGD1YGL025C NOG1Q02892 647 aaKnown RBP5.59□□□□□ -1.51
PGD1YGL025C OXR1Q08952 273 aa5.59□□□□□ -1.51
PGD1YGL025C HXK1P04806 485 aaKnown RBP5.58□□□□□ -1.52
PGD1YGL025C KAR2P16474 682 aaKnown RBP5.58□□□□□ -1.52
PGD1YGL025C NAM7P30771 971 aaKnown RBP5.58□□□□□ -1.52
PGD1YGL025C YMR074CQ04773 145 aa5.58□□□□□ -1.52
PGD1YGL025C YPL109CQ02981 657 aa5.57□□□□□ -1.52
PGD1YGL025C YOR223WQ12015 292 aa5.57□□□□□ -1.52
PGD1YGL025C YKL077WP36081 392 aa5.56□□□□□ -1.52
PGD1YGL025C NEM1P38757 446 aa5.56□□□□□ -1.52
PGD1YGL025C SLS1P42900 643 aa5.56□□□□□ -1.52
PGD1YGL025C YJR107WP47145 328 aa5.56□□□□□ -1.52
PGD1YGL025C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
PGD1YGL025C YLL054CQ12244 843 aa5.56□□□□□ -1.52
PGD1YGL025C MSH3P25336 1018 aa5.55□□□□□ -1.52
PGD1YGL025C MCM2P29469 868 aa5.55□□□□□ -1.52
PGD1YGL025C COQ2P32378 372 aa5.55□□□□□ -1.52
PGD1YGL025C ARL1P38116 183 aaKnown RBP5.55□□□□□ -1.52
PGD1YGL025C REI1P38344 393 aaPredicted RBP5.55□□□□□ -1.52
PGD1YGL025C SAF1P38352 637 aa5.55□□□□□ -1.52
PGD1YGL025C SHU2P38957 223 aa5.55□□□□□ -1.52
PGD1YGL025C AKR1P39010 764 aa5.55□□□□□ -1.52
PGD1YGL025C YGR122WP53272 402 aa5.55□□□□□ -1.52
PGD1YGL025C ADI1Q03677 179 aa5.55□□□□□ -1.52
PGD1YGL025C DOT1Q04089 582 aaKnown RBP5.55□□□□□ -1.52
PGD1YGL025C ALG6Q12001 544 aaKnown RBP5.55□□□□□ -1.52
PGD1YGL025C YLR122CQ12312 125 aa5.55□□□□□ -1.52
PGD1YGL025C GPT2P36148 743 aa5.54□□□□□ -1.52
PGD1YGL025C MGE1P38523 228 aa5.54□□□□□ -1.52
PGD1YGL025C PEX28P38848 579 aa5.54□□□□□ -1.52
PGD1YGL025C PIC2P40035 300 aa5.54□□□□□ -1.52
PGD1YGL025C PEX13P80667 386 aa5.54□□□□□ -1.52
PGD1YGL025C HEM13P11353 328 aaKnown RBP5.53□□□□□ -1.52
PGD1YGL025C RPS26AP39938 119 aaKnown RBP5.53□□□□□ -1.52
PGD1YGL025C RPS26BP39939 119 aaKnown RBP5.53□□□□□ -1.52
PGD1YGL025C RSM26P47141 266 aa5.53□□□□□ -1.52
PGD1YGL025C YGR045CP53229 120 aa5.53□□□□□ -1.52
PGD1YGL025C CYC8P14922 966 aa5.52□□□□□ -1.53
PGD1YGL025C SQT1P35184 431 aa5.52□□□□□ -1.53
PGD1YGL025C FYV10P40492 516 aa5.52□□□□□ -1.53
PGD1YGL025C YGL140CP53120 1219 aa5.52□□□□□ -1.53
PGD1YGL025C GIC2Q06648 383 aa5.52□□□□□ -1.53
PGD1YGL025C RAD2P07276 1031 aa5.51□□□□□ -1.53
PGD1YGL025C SBP1P10080 294 aaKnown RBP5.51□□□□□ -1.53
PGD1YGL025C SEC8P32855 1065 aa5.51□□□□□ -1.53
PGD1YGL025C KAE1P36132 386 aa5.51□□□□□ -1.53
PGD1YGL025C RDH54P38086 958 aa5.51□□□□□ -1.53
PGD1YGL025C UTP5Q04177 643 aaKnown RBP5.51□□□□□ -1.53
PGD1YGL025C SPR28Q04921 423 aa5.51□□□□□ -1.53
PGD1YGL025C TRP3P00937 484 aa5.5□□□□□ -1.53
PGD1YGL025C CHS2P14180 963 aa5.5□□□□□ -1.53
PGD1YGL025C PRE9P23638 258 aaKnown RBP5.5□□□□□ -1.53
PGD1YGL025C ASF1P32447 279 aa5.5□□□□□ -1.53
PGD1YGL025C MRPS18P42847 217 aa5.5□□□□□ -1.53
PGD1YGL025C SPO74P45819 413 aa5.5□□□□□ -1.53
PGD1YGL025C MTR4P47047 1073 aaKnown RBP5.5□□□□□ -1.53
PGD1YGL025C ELA1P53861 379 aaPredicted RBP5.5□□□□□ -1.53
PGD1YGL025C SEC23P15303 768 aaKnown RBP5.49□□□□□ -1.53
PGD1YGL025C VMA4P22203 233 aaKnown RBP5.49□□□□□ -1.53
PGD1YGL025C MSH4P40965 878 aaPredicted RBP5.49□□□□□ -1.53
PGD1YGL025C AVO1Q08236 1176 aa5.49□□□□□ -1.53
PGD1YGL025C MCD1Q12158 566 aa5.49□□□□□ -1.53
PGD1YGL025C YKR073CP36153 106 aa5.48□□□□□ -1.53
PGD1YGL025C XKS1P42826 600 aa5.48□□□□□ -1.53
PGD1YGL025C YGR130CP53278 816 aa5.48□□□□□ -1.53
PGD1YGL025C ALO1P54783 526 aaKnown RBP5.48□□□□□ -1.53
PGD1YGL025C RPS4AP0CX35 261 aaKnown RBP5.47□□□□□ -1.53
PGD1YGL025C RPS4BP0CX36 261 aaKnown RBP5.47□□□□□ -1.53
PGD1YGL025C MSB1P21339 1137 aaKnown RBP5.47□□□□□ -1.53
PGD1YGL025C WHI3P34761 661 aaKnown RBP5.47□□□□□ -1.53
PGD1YGL025C YAR028WP39548 234 aa5.47□□□□□ -1.53
PGD1YGL025C ALT1P52893 592 aa5.47□□□□□ -1.53
PGD1YGL025C EAR1Q03212 550 aa5.47□□□□□ -1.53
PGD1YGL025C OYE2Q03558 400 aaKnown RBP5.47□□□□□ -1.53
PGD1YGL025C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
PGD1YGL025C MED7Q08278 222 aa5.46□□□□□ -1.54
PGD1YGL025C NFS1P25374 497 aa5.45□□□□□ -1.54
PGD1YGL025C SMY2P32909 740 aaKnown RBP5.45□□□□□ -1.54
PGD1YGL025C MMM1P41800 426 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms