RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHD1	YER164W	HAP5	Q02516	242 aa		4.16	□□□□□ -1.74
CHD1	YER164W	IRC4	Q03036	179 aa		4.16	□□□□□ -1.74
CHD1	YER164W	RRP1	P35178	278 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD1	YER164W	RRP8	P38961	392 aa	Known RBP	4.16	□□□□□ -1.74
CHD1	YER164W	ICP55	P40051	511 aa		4.16	□□□□□ -1.74
CHD1	YER164W	YGL140C	P53120	1219 aa		4.16	□□□□□ -1.74
CHD1	YER164W	YMR074C	Q04773	145 aa		4.16	□□□□□ -1.74
CHD1	YER164W	GAS5	Q08193	484 aa		4.16	□□□□□ -1.74
CHD1	YER164W	ACE2	P21192	770 aa		4.16	□□□□□ -1.74
CHD1	YER164W	RRP43	P25359	394 aa	Predicted RBP	4.16	□□□□□ -1.74
CHD1	YER164W	PSE1	P32337	1089 aa	Known RBP	4.16	□□□□□ -1.74
CHD1	YER164W	SMY1	P32364	656 aa	Known RBP	4.16	□□□□□ -1.74
CHD1	YER164W	ILM1	P47155	203 aa		4.16	□□□□□ -1.74
CHD1	YER164W	ESF2	P53743	316 aa	Known RBP	4.16	□□□□□ -1.74
CHD1	YER164W	BDF2	Q07442	638 aa		4.16	□□□□□ -1.74
CHD1	YER164W	SRB4	P32569	687 aa		4.15	□□□□□ -1.74
CHD1	YER164W	MAL33	P38157	468 aa		4.15	□□□□□ -1.74
CHD1	YER164W	HGH1	P48362	394 aa	Known RBP	4.15	□□□□□ -1.74
CHD1	YER164W	HUL5	P53119	910 aa		4.15	□□□□□ -1.74
CHD1	YER164W	YNL011C	P53980	444 aa		4.15	□□□□□ -1.74
CHD1	YER164W	ADR1	P07248	1323 aa		4.15	□□□□□ -1.74
CHD1	YER164W	CDC60	P26637	1090 aa	Known RBP	4.15	□□□□□ -1.74
CHD1	YER164W	PEP3	P27801	918 aa		4.15	□□□□□ -1.74
CHD1	YER164W	FBP26	P32604	452 aa		4.15	□□□□□ -1.74
CHD1	YER164W	YKE2	P52553	114 aa		4.15	□□□□□ -1.74
CHD1	YER164W	YNL144C	P53907	740 aa		4.15	□□□□□ -1.74
CHD1	YER164W	ALD3	P54114	506 aa		4.15	□□□□□ -1.74
CHD1	YER164W	GIR2	Q03768	265 aa	Predicted RBP	4.15	□□□□□ -1.74
CHD1	YER164W	SAS4	Q04003	481 aa		4.15	□□□□□ -1.74
CHD1	YER164W	RRB1	Q04225	511 aa	Known RBP	4.15	□□□□□ -1.74
CHD1	YER164W	BUG1	Q12191	341 aa		4.15	□□□□□ -1.74
CHD1	YER164W	LCB1	P25045	558 aa	Known RBP	4.15	□□□□□ -1.75
CHD1	YER164W	PTK1	P36002	662 aa	Predicted RBP	4.15	□□□□□ -1.75
CHD1	YER164W	PSK2	Q08217	1101 aa		4.15	□□□□□ -1.75
CHD1	YER164W	RER2	P35196	286 aa		4.15	□□□□□ -1.75
CHD1	YER164W	AKR1	P39010	764 aa		4.15	□□□□□ -1.75
CHD1	YER164W	KAR5	Q04746	504 aa		4.15	□□□□□ -1.75
CHD1	YER164W	CDC6	P09119	513 aa		4.14	□□□□□ -1.75
CHD1	YER164W	MCM4	P30665	933 aa	Known RBP	4.14	□□□□□ -1.75
CHD1	YER164W	PRO3	P32263	286 aa	Known RBP	4.14	□□□□□ -1.75
CHD1	YER164W	YER130C	P39959	443 aa		4.14	□□□□□ -1.75
CHD1	YER164W	OPY2	Q06810	360 aa		4.14	□□□□□ -1.75
CHD1	YER164W	DPH6	Q12429	685 aa		4.14	□□□□□ -1.75
CHD1	YER164W	SEC39	Q12745	709 aa		4.14	□□□□□ -1.75
CHD1	YER164W	POM152	P39685	1337 aa		4.14	□□□□□ -1.75
CHD1	YER164W	RET1	P22276	1149 aa	Known RBP	4.14	□□□□□ -1.75
CHD1	YER164W	UBC6	P33296	250 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD1	YER164W	CCT4	P39078	528 aa	Known RBP	4.14	□□□□□ -1.75
CHD1	YER164W	YPR097W	Q06839	1073 aa		4.14	□□□□□ -1.75
CHD1	YER164W	SAC3	P46674	1301 aa		4.14	□□□□□ -1.75
CHD1	YER164W	CDC8	P00572	216 aa		4.14	□□□□□ -1.75
CHD1	YER164W	GPA1	P08539	472 aa		4.14	□□□□□ -1.75
CHD1	YER164W	MDL2	P33311	773 aa		4.14	□□□□□ -1.75
CHD1	YER164W	STO1	P34160	861 aa	Known RBP	4.14	□□□□□ -1.75
CHD1	YER164W	IES3	Q12345	250 aa		4.14	□□□□□ -1.75
CHD1	YER164W	KRE2	P27809	442 aa		4.13	□□□□□ -1.75
CHD1	YER164W	IRC8	P47046	822 aa		4.13	□□□□□ -1.75
CHD1	YER164W	DSL1	P53847	754 aa		4.13	□□□□□ -1.75
CHD1	YER164W	UBP10	P53874	792 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD1	YER164W	RAT1	Q02792	1006 aa	Known RBP	4.13	□□□□□ -1.75
CHD1	YER164W	ELG1	Q12050	791 aa		4.13	□□□□□ -1.75
CHD1	YER164W	HSC82	P15108	705 aa	Known RBP	4.13	□□□□□ -1.75
CHD1	YER164W	YBL086C	P38177	466 aa		4.13	□□□□□ -1.75
CHD1	YER164W	TOS1	P38288	455 aa		4.13	□□□□□ -1.75
CHD1	YER164W	HOP2	P53187	214 aa		4.13	□□□□□ -1.75
CHD1	YER164W	SVF1	Q05515	481 aa		4.13	□□□□□ -1.75
CHD1	YER164W	RUP1	Q12242	671 aa		4.13	□□□□□ -1.75
CHD1	YER164W	CLB4	P24871	460 aa		4.13	□□□□□ -1.75
CHD1	YER164W	YKT6	P36015	200 aa	Known RBP	4.13	□□□□□ -1.75
CHD1	YER164W	MET1	P36150	593 aa		4.13	□□□□□ -1.75
CHD1	YER164W	EXO84	P38261	753 aa		4.13	□□□□□ -1.75
CHD1	YER164W	YHL050C	P38721	697 aa		4.13	□□□□□ -1.75
CHD1	YER164W	SMC2	P38989	1170 aa	Known RBP	4.13	□□□□□ -1.75
CHD1	YER164W	UFD2	P54860	961 aa		4.13	□□□□□ -1.75
CHD1	YER164W	RTP1	Q12751	981 aa		4.13	□□□□□ -1.75
CHD1	YER164W	RAD1	P06777	1100 aa		4.13	□□□□□ -1.75
CHD1	YER164W	RGP1	P16664	663 aa		4.13	□□□□□ -1.75
CHD1	YER164W	CDC15	P27636	974 aa		4.13	□□□□□ -1.75
CHD1	YER164W	YKR023W	P36119	530 aa	Known RBP	4.13	□□□□□ -1.75
CHD1	YER164W	SEC9	P40357	651 aa		4.13	□□□□□ -1.75
CHD1	YER164W	CSM2	P40465	213 aa		4.13	□□□□□ -1.75
CHD1	YER164W	EAF6	P47128	113 aa		4.13	□□□□□ -1.75
CHD1	YER164W	GLE1	Q12315	538 aa		4.13	□□□□□ -1.75
CHD1	YER164W	SRP40	P32583	406 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD1	YER164W	RIM101	P33400	625 aa		4.12	□□□□□ -1.75
CHD1	YER164W	NPR3	P38742	1146 aa		4.12	□□□□□ -1.75
CHD1	YER164W	ECM23	Q02710	187 aa		4.12	□□□□□ -1.75
CHD1	YER164W	IRC3	Q06683	689 aa		4.12	□□□□□ -1.75
CHD1	YER164W	APL5	Q08951	932 aa	Known RBP	4.12	□□□□□ -1.75
CHD1	YER164W	YOR111W	Q99210	232 aa		4.12	□□□□□ -1.75
CHD1	YER164W	MATALPHA2	P0CY08	210 aa		4.12	□□□□□ -1.75
CHD1	YER164W	HMLALPHA2	P0CY09	210 aa		4.12	□□□□□ -1.75
CHD1	YER164W	EFT1	P32324	842 aa	Known RBP	4.12	□□□□□ -1.75
CHD1	YER164W	NOG1	Q02892	647 aa	Known RBP	4.12	□□□□□ -1.75
CHD1	YER164W	YLR287C	Q05881	355 aa		4.12	□□□□□ -1.75
CHD1	YER164W	TFC6	Q06339	672 aa		4.12	□□□□□ -1.75
CHD1	YER164W	TSR2	Q06672	205 aa	Known RBP	4.12	□□□□□ -1.75
CHD1	YER164W	PET111	P08468	800 aa		4.12	□□□□□ -1.75
CHD1	YER164W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CHD1	YER164W	RPN10	P38886	268 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms