RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C TSC13Q99190 310 aa1.81□□□□□ -2.12
UBP3YER151C YRF1-3P0CX14 1859 aa1.81□□□□□ -2.12
UBP3YER151C YRF1-7P0CX15 1859 aa1.81□□□□□ -2.12
UBP3YER151C YRF1-6P53819 1859 aa1.81□□□□□ -2.12
UBP3YER151C YCR015CP25616 317 aa1.81□□□□□ -2.12
UBP3YER151C NAM7P30771 971 aaKnown RBP1.81□□□□□ -2.12
UBP3YER151C YNR040WP53736 256 aa1.81□□□□□ -2.12
UBP3YER151C GSC2P40989 1895 aa1.8□□□□□ -2.12
UBP3YER151C MRP10O75012 95 aa1.8□□□□□ -2.12
UBP3YER151C MSB1P21339 1137 aaKnown RBP1.8□□□□□ -2.12
UBP3YER151C UBP1P25037 809 aa1.8□□□□□ -2.12
UBP3YER151C NGR1P32831 672 aaKnown RBP1.8□□□□□ -2.12
UBP3YER151C LEO1P38439 464 aa1.8□□□□□ -2.12
UBP3YER151C APM2P38700 605 aa1.8□□□□□ -2.12
UBP3YER151C ECL1P48235 211 aa1.8□□□□□ -2.12
UBP3YER151C YNL108CP53929 270 aa1.8□□□□□ -2.12
UBP3YER151C CUS1Q02554 436 aaPredicted RBP1.8□□□□□ -2.12
UBP3YER151C MSH6Q03834 1242 aa1.8□□□□□ -2.12
UBP3YER151C MAG2Q06436 670 aaKnown RBP1.8□□□□□ -2.12
UBP3YER151C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
UBP3YER151C ESC8Q08119 714 aa1.8□□□□□ -2.12
UBP3YER151C SLP1Q12232 587 aa1.8□□□□□ -2.12
UBP3YER151C RIM15P43565 1770 aa1.8□□□□□ -2.12
UBP3YER151C GAS1P22146 559 aaKnown RBP1.8□□□□□ -2.12
UBP3YER151C BRL1P38770 471 aa1.8□□□□□ -2.12
UBP3YER151C ATG32P40458 529 aa1.8□□□□□ -2.12
UBP3YER151C MHP1P43638 1398 aa1.8□□□□□ -2.12
UBP3YER151C TY4B-PA0A0B7P3V8 1104 aa1.79□□□□□ -2.12
UBP3YER151C KAP122P32767 1081 aa1.79□□□□□ -2.12
UBP3YER151C SEG2P34250 1132 aa1.79□□□□□ -2.12
UBP3YER151C GIP4P39732 760 aa1.79□□□□□ -2.12
UBP3YER151C YER156CP40093 338 aaKnown RBP1.79□□□□□ -2.12
UBP3YER151C NIT1P40447 199 aa1.79□□□□□ -2.12
UBP3YER151C TY4A-HQ6Q5P6 413 aa1.79□□□□□ -2.12
UBP3YER151C APC1P53886 1748 aa1.79□□□□□ -2.12
UBP3YER151C IDI1P15496 288 aa1.79□□□□□ -2.12
UBP3YER151C TY1A-NL1Q12391 440 aaKnown RBP1.79□□□□□ -2.12
UBP3YER151C FIG2P25653 1609 aa1.78□□□□□ -2.12
UBP3YER151C CYT1P07143 309 aa1.78□□□□□ -2.12
UBP3YER151C PDI1P17967 522 aaKnown RBP1.78□□□□□ -2.12
UBP3YER151C SCD5P34758 872 aa1.78□□□□□ -2.12
UBP3YER151C BIM1P40013 344 aa1.78□□□□□ -2.12
UBP3YER151C DSE4P53753 1117 aa1.78□□□□□ -2.12
UBP3YER151C YMR074CQ04773 145 aa1.78□□□□□ -2.12
UBP3YER151C TED1P40533 473 aa1.78□□□□□ -2.12
UBP3YER151C ITC1P53125 1264 aa1.78□□□□□ -2.12
UBP3YER151C ENO1P00924 437 aaKnown RBP1.77□□□□□ -2.13
UBP3YER151C YJL007CP47080 104 aa1.77□□□□□ -2.13
UBP3YER151C ACS2P52910 683 aaKnown RBP1.77□□□□□ -2.13
UBP3YER151C SDH1Q00711 640 aa1.77□□□□□ -2.13
UBP3YER151C TIF1P10081 395 aaKnown RBP1.77□□□□□ -2.13
UBP3YER151C SOK2P53438 785 aaPredicted RBP1.77□□□□□ -2.13
UBP3YER151C GIP2P40036 548 aa1.76□□□□□ -2.13
UBP3YER151C EAR1Q03212 550 aa1.76□□□□□ -2.13
UBP3YER151C SIR4P11978 1358 aa1.76□□□□□ -2.13
UBP3YER151C ADE6P38972 1358 aaKnown RBP1.76□□□□□ -2.13
UBP3YER151C PHO87P25360 923 aa1.75□□□□□ -2.13
UBP3YER151C SEA4P38164 1038 aa1.75□□□□□ -2.13
UBP3YER151C MAK10Q02197 733 aa1.75□□□□□ -2.13
UBP3YER151C GAS4Q08271 471 aa1.75□□□□□ -2.13
UBP3YER151C DFG16Q99234 619 aa1.75□□□□□ -2.13
UBP3YER151C UTP10P42945 1769 aaKnown RBP1.75□□□□□ -2.13
UBP3YER151C SSA1P10591 642 aaKnown RBP1.75□□□□□ -2.13
UBP3YER151C SUV3P32580 737 aa1.75□□□□□ -2.13
UBP3YER151C YAP3P38749 330 aa1.75□□□□□ -2.13
UBP3YER151C ROM1P53046 1155 aa1.75□□□□□ -2.13
UBP3YER151C IOC4Q04213 475 aa1.75□□□□□ -2.13
UBP3YER151C CAB1Q04430 367 aa1.75□□□□□ -2.13
UBP3YER151C YOR296WQ08748 1289 aa1.75□□□□□ -2.13
UBP3YER151C REC8Q12188 680 aa1.75□□□□□ -2.13
UBP3YER151C HAP4P14064 554 aa1.75□□□□□ -2.13
UBP3YER151C QDR2P40474 542 aa1.75□□□□□ -2.13
UBP3YER151C RSC2Q06488 889 aa1.75□□□□□ -2.13
UBP3YER151C FKS3Q04952 1785 aa1.74□□□□□ -2.13
UBP3YER151C LRG1P35688 1017 aa1.74□□□□□ -2.13
UBP3YER151C YJL181WP46987 611 aa1.74□□□□□ -2.13
UBP3YER151C NFS1P25374 497 aa1.74□□□□□ -2.13
UBP3YER151C NCE103P53615 221 aa1.74□□□□□ -2.13
UBP3YER151C GSF2Q04697 403 aaKnown RBP1.74□□□□□ -2.13
UBP3YER151C MRPL33P20084 86 aa1.73□□□□□ -2.13
UBP3YER151C VMA3P25515 160 aa1.73□□□□□ -2.13
UBP3YER151C RTG2P32608 588 aaKnown RBP1.73□□□□□ -2.13
UBP3YER151C YIL165CP40446 119 aa1.73□□□□□ -2.13
UBP3YER151C BIO5P53744 561 aaKnown RBP1.73□□□□□ -2.13
UBP3YER151C MAE1P36013 669 aaKnown RBP1.73□□□□□ -2.13
UBP3YER151C POL5P39985 1022 aaKnown RBP1.73□□□□□ -2.13
UBP3YER151C GUP1P53154 560 aa1.73□□□□□ -2.13
UBP3YER151C SOG2Q08817 791 aa1.73□□□□□ -2.13
UBP3YER151C HVG1P0CE11 249 aa1.72□□□□□ -2.13
UBP3YER151C GAL2P13181 574 aa1.72□□□□□ -2.13
UBP3YER151C GIP1P38229 639 aa1.72□□□□□ -2.13
UBP3YER151C BSD2P38356 321 aa1.72□□□□□ -2.13
UBP3YER151C INP51P40559 946 aaKnown RBP1.72□□□□□ -2.13
UBP3YER151C GIC2Q06648 383 aa1.72□□□□□ -2.13
UBP3YER151C YLL067CQ07888 1374 aa1.72□□□□□ -2.13
UBP3YER151C TSA1P34760 196 aaKnown RBP1.72□□□□□ -2.13
UBP3YER151C TFA2P36145 328 aa1.72□□□□□ -2.13
UBP3YER151C LEM3P42838 414 aa1.72□□□□□ -2.13
UBP3YER151C YML083CQ04526 418 aa1.72□□□□□ -2.13
UBP3YER151C PSK1P31374 1356 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms