RNA–Protein interactions for RNA: YER075C

PTP3, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP3, Length 2,787 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP3	YER075C	DLD3	P39976	496 aa	Known RBP	3.19	□□□□□ -1.9
PTP3	YER075C	SRT1	Q03175	343 aa		3.19	□□□□□ -1.9
PTP3	YER075C	BMS1	Q08965	1183 aa	Known RBP	3.19	□□□□□ -1.9
PTP3	YER075C	PMD1	P32634	1753 aa		3.19	□□□□□ -1.9
PTP3	YER075C	HAP4	P14064	554 aa		3.19	□□□□□ -1.9
PTP3	YER075C	DAL5	P15365	543 aa		3.19	□□□□□ -1.9
PTP3	YER075C	PHO87	P25360	923 aa		3.19	□□□□□ -1.9
PTP3	YER075C	YJR115W	P47152	169 aa		3.19	□□□□□ -1.9
PTP3	YER075C	ERO1	Q03103	563 aa		3.19	□□□□□ -1.9
PTP3	YER075C	ARG82	P07250	355 aa		3.18	□□□□□ -1.9
PTP3	YER075C	GCR2	Q01722	534 aa		3.18	□□□□□ -1.9
PTP3	YER075C	UBX2	Q04228	584 aa		3.18	□□□□□ -1.9
PTP3	YER075C	ALE1	Q08548	619 aa		3.18	□□□□□ -1.9
PTP3	YER075C	CTT1	P06115	562 aa		3.18	□□□□□ -1.9
PTP3	YER075C	MRP7	P12687	371 aa		3.18	□□□□□ -1.9
PTP3	YER075C	STE6	P12866	1290 aa		3.18	□□□□□ -1.9
PTP3	YER075C	GCD7	P32502	381 aa	Predicted RBP	3.18	□□□□□ -1.9
PTP3	YER075C	YKL222C	P35995	705 aa		3.18	□□□□□ -1.9
PTP3	YER075C	UTP7	P40055	554 aa	Known RBP	3.18	□□□□□ -1.9
PTP3	YER075C	RRT14	P40470	206 aa		3.18	□□□□□ -1.9
PTP3	YER075C	WTM2	Q12206	467 aa		3.18	□□□□□ -1.9
PTP3	YER075C	HAT1	Q12341	374 aa		3.18	□□□□□ -1.9
PTP3	YER075C	RVB2	Q12464	471 aa	Known RBP	3.18	□□□□□ -1.9
PTP3	YER075C	FAS2	P19097	1887 aa	Known RBP	3.18	□□□□□ -1.9
PTP3	YER075C	YIL092W	P40497	633 aa		3.17	□□□□□ -1.9
PTP3	YER075C	PTK2	P47116	818 aa	Known RBP	3.17	□□□□□ -1.9
PTP3	YER075C	SWI5	P08153	709 aa		3.17	□□□□□ -1.9
PTP3	YER075C	DLD1	P32891	587 aa		3.17	□□□□□ -1.9
PTP3	YER075C	GEF1	P37020	779 aa		3.17	□□□□□ -1.9
PTP3	YER075C	UBP16	Q02863	499 aa		3.17	□□□□□ -1.9
PTP3	YER075C	SYF1	Q04048	859 aa	Predicted RBP	3.17	□□□□□ -1.9
PTP3	YER075C	SPT2	P06843	333 aa	Predicted RBP	3.17	□□□□□ -1.9
PTP3	YER075C	LPD1	P09624	499 aa	Known RBP	3.17	□□□□□ -1.9
PTP3	YER075C	RPS6A	P0CX37	236 aa	Known RBP	3.17	□□□□□ -1.9
PTP3	YER075C	RPS6B	P0CX38	236 aa	Predicted RBP	3.17	□□□□□ -1.9
PTP3	YER075C	VAN1	P23642	535 aa		3.17	□□□□□ -1.9
PTP3	YER075C	ALA1	P40825	983 aa	Known RBP	3.17	□□□□□ -1.9
PTP3	YER075C	ROM1	P53046	1155 aa		3.17	□□□□□ -1.9
PTP3	YER075C	ADR1	P07248	1323 aa		3.17	□□□□□ -1.9
PTP3	YER075C	SUP35	P05453	685 aa	Known RBP	3.16	□□□□□ -1.9
PTP3	YER075C	SLX8	P40072	274 aa		3.16	□□□□□ -1.9
PTP3	YER075C	AAD14	P42884	376 aa		3.16	□□□□□ -1.9
PTP3	YER075C	GRX6	Q12438	231 aa		3.16	□□□□□ -1.9
PTP3	YER075C	SSF1	P38789	453 aa	Predicted RBP	3.16	□□□□□ -1.9
PTP3	YER075C	BOI2	P39969	1040 aa		3.16	□□□□□ -1.9
PTP3	YER075C	BRE2	P43132	505 aa		3.16	□□□□□ -1.9
PTP3	YER075C	ECM16	Q04217	1267 aa	Known RBP	3.16	□□□□□ -1.9
PTP3	YER075C	PSF3	Q12146	194 aa		3.16	□□□□□ -1.9
PTP3	YER075C	CYT1	P07143	309 aa		3.15	□□□□□ -1.9
PTP3	YER075C	RAD2	P07276	1031 aa		3.15	□□□□□ -1.9
PTP3	YER075C	PUN1	Q06991	263 aa		3.15	□□□□□ -1.9
PTP3	YER075C	NUG1	P40010	520 aa	Known RBP	3.15	□□□□□ -1.91
PTP3	YER075C	BDF2	Q07442	638 aa		3.15	□□□□□ -1.91
PTP3	YER075C	UBP12	P39538	1254 aa		3.14	□□□□□ -1.91
PTP3	YER075C	CWH41	P53008	833 aa		3.14	□□□□□ -1.91
PTP3	YER075C	POM152	P39685	1337 aa		3.14	□□□□□ -1.91
PTP3	YER075C	NUP85	P46673	744 aa		3.14	□□□□□ -1.91
PTP3	YER075C	LSC2	P53312	427 aa		3.14	□□□□□ -1.91
PTP3	YER075C	TRS33	Q99394	268 aa		3.14	□□□□□ -1.91
PTP3	YER075C	CDC3	P32457	520 aa	Known RBP	3.13	□□□□□ -1.91
PTP3	YER075C	MSN5	P52918	1224 aa		3.13	□□□□□ -1.91
PTP3	YER075C	ITC1	P53125	1264 aa		3.13	□□□□□ -1.91
PTP3	YER075C	PIF1	P07271	859 aa		3.13	□□□□□ -1.91
PTP3	YER075C	SHC1	P39000	512 aa		3.13	□□□□□ -1.91
PTP3	YER075C	YER156C	P40093	338 aa	Known RBP	3.13	□□□□□ -1.91
PTP3	YER075C	SUM1	P46676	1062 aa		3.13	□□□□□ -1.91
PTP3	YER075C	KIN4	Q01919	800 aa		3.13	□□□□□ -1.91
PTP3	YER075C	CSI1	Q04368	295 aa		3.13	□□□□□ -1.91
PTP3	YER075C	PUF6	Q04373	656 aa	Known RBP	3.13	□□□□□ -1.91
PTP3	YER075C	YLR346C	Q06139	101 aa		3.13	□□□□□ -1.91
PTP3	YER075C	RIX7	Q07844	837 aa	Known RBP	3.13	□□□□□ -1.91
PTP3	YER075C	DPH6	Q12429	685 aa		3.13	□□□□□ -1.91
PTP3	YER075C	CDC16	P09798	840 aa		3.12	□□□□□ -1.91
PTP3	YER075C	RAD24	P32641	659 aa		3.12	□□□□□ -1.91
PTP3	YER075C	GSC2	P40989	1895 aa		3.12	□□□□□ -1.91
PTP3	YER075C	NOP8	Q08287	484 aa	Predicted RBP	3.12	□□□□□ -1.91
PTP3	YER075C	SER1	P33330	395 aa	Known RBP	3.12	□□□□□ -1.91
PTP3	YER075C	APL2	P36000	726 aa	Predicted RBP	3.12	□□□□□ -1.91
PTP3	YER075C	PNP1	Q05788	311 aa		3.12	□□□□□ -1.91
PTP3	YER075C	NUP133	P36161	1157 aa		3.12	□□□□□ -1.91
PTP3	YER075C	OSH3	P38713	996 aa	Known RBP	3.12	□□□□□ -1.91
PTP3	YER075C	ICP55	P40051	511 aa		3.12	□□□□□ -1.91
PTP3	YER075C	YJR098C	P47139	656 aa		3.12	□□□□□ -1.91
PTP3	YER075C	IRC3	Q06683	689 aa		3.12	□□□□□ -1.91
PTP3	YER075C	PSH1	Q12161	406 aa		3.12	□□□□□ -1.91
PTP3	YER075C	TOM1	Q03280	3268 aa		3.11	□□□□□ -1.91
PTP3	YER075C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
PTP3	YER075C	AHP1	P38013	176 aa	Known RBP	3.11	□□□□□ -1.91
PTP3	YER075C	POL32	P47110	350 aa		3.11	□□□□□ -1.91
PTP3	YER075C	OPT2	Q06593	877 aa		3.11	□□□□□ -1.91
PTP3	YER075C	PDR18	P53756	1333 aa		3.11	□□□□□ -1.91
PTP3	YER075C	SRS2	P12954	1174 aa		3.11	□□□□□ -1.91
PTP3	YER075C	YGL082W	P53155	381 aa		3.11	□□□□□ -1.91
PTP3	YER075C	ZDS2	P54786	942 aa		3.11	□□□□□ -1.91
PTP3	YER075C	UBP2	Q01476	1272 aa		3.11	□□□□□ -1.91
PTP3	YER075C	CWC15	Q03772	175 aa	Known RBP	3.11	□□□□□ -1.91
PTP3	YER075C	VPS64	Q03944	604 aa		3.11	□□□□□ -1.91
PTP3	YER075C	KAR5	Q04746	504 aa		3.11	□□□□□ -1.91
PTP3	YER075C	RAD50	P12753	1312 aa		3.1	□□□□□ -1.91
PTP3	YER075C	CYB2	P00175	591 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 190.7 ms