RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C VPS30Q02948 557 aa12.44□□□□□ -0.42
SPC25YER018C ELG1Q12050 791 aa12.44□□□□□ -0.42
SPC25YER018C YOR111WQ99210 232 aa12.44□□□□□ -0.42
SPC25YER018C SSA4P22202 642 aaKnown RBP12.43□□□□□ -0.42
SPC25YER018C PRX1P34227 261 aaKnown RBP12.43□□□□□ -0.42
SPC25YER018C PEX14P53112 341 aa12.43□□□□□ -0.42
SPC25YER018C YLR407WQ06070 228 aa12.43□□□□□ -0.42
SPC25YER018C CPA2P03965 1118 aaKnown RBP12.42□□□□□ -0.42
SPC25YER018C RPN10P38886 268 aaKnown RBP12.42□□□□□ -0.42
SPC25YER018C PNT1P38969 423 aa12.42□□□□□ -0.42
SPC25YER018C ACA1P39970 489 aa12.42□□□□□ -0.42
SPC25YER018C HRQ1Q05549 1077 aa12.42□□□□□ -0.42
SPC25YER018C SAM2P19358 384 aaKnown RBP12.41□□□□□ -0.42
SPC25YER018C RNR3P21672 869 aaKnown RBP12.41□□□□□ -0.42
SPC25YER018C BMH2P34730 273 aaKnown RBP12.41□□□□□ -0.42
SPC25YER018C RFC5P38251 354 aa12.41□□□□□ -0.42
SPC25YER018C ISW2Q08773 1120 aa12.41□□□□□ -0.42
SPC25YER018C CLF1Q12309 687 aaPredicted RBP12.41□□□□□ -0.42
SPC25YER018C HSP82P02829 709 aaKnown RBP12.4□□□□□ -0.42
SPC25YER018C NUC1P08466 329 aa12.4□□□□□ -0.42
SPC25YER018C DIT2P21595 489 aa12.4□□□□□ -0.42
SPC25YER018C SWI4P25302 1093 aaKnown RBP12.4□□□□□ -0.42
SPC25YER018C VPS45P38932 577 aa12.4□□□□□ -0.42
SPC25YER018C PES4P39684 611 aa12.4□□□□□ -0.42
SPC25YER018C YPL150WQ12152 901 aa12.4□□□□□ -0.42
SPC25YER018C KRS1P15180 591 aaKnown RBP12.39□□□□□ -0.43
SPC25YER018C BDH2P39713 417 aa12.39□□□□□ -0.43
SPC25YER018C UBP9P39967 754 aa12.39□□□□□ -0.43
SPC25YER018C YIL089WP40500 205 aa12.39□□□□□ -0.43
SPC25YER018C PEX29Q03370 554 aa12.39□□□□□ -0.43
SPC25YER018C YDR341CQ05506 607 aaKnown RBP12.39□□□□□ -0.43
SPC25YER018C GIN4Q12263 1142 aa12.39□□□□□ -0.43
SPC25YER018C MET6P05694 767 aaKnown RBP12.38□□□□□ -0.43
SPC25YER018C ERG12P07277 443 aa12.38□□□□□ -0.43
SPC25YER018C TUS1Q06412 1307 aa12.37□□□□□ -0.43
SPC25YER018C CIT1P00890 479 aa12.37□□□□□ -0.43
SPC25YER018C CBP3P21560 335 aa12.37□□□□□ -0.43
SPC25YER018C RXT2P38255 430 aa12.37□□□□□ -0.43
SPC25YER018C PCI8P40512 444 aa12.37□□□□□ -0.43
SPC25YER018C HST1P53685 503 aa12.37□□□□□ -0.43
SPC25YER018C MDM1Q01846 1127 aa12.37□□□□□ -0.43
SPC25YER018C GDE1Q02979 1223 aa12.37□□□□□ -0.43
SPC25YER018C SRP54P20424 541 aaKnown RBP12.36□□□□□ -0.43
SPC25YER018C SPB4P25808 606 aaPredicted RBP12.36□□□□□ -0.43
SPC25YER018C MAL33P38157 468 aa12.36□□□□□ -0.43
SPC25YER018C TIF4631P39935 952 aaKnown RBP12.36□□□□□ -0.43
SPC25YER018C RRT6P53117 311 aaPredicted RBP12.36□□□□□ -0.43
SPC25YER018C PIL1P53252 339 aaKnown RBP12.36□□□□□ -0.43
SPC25YER018C COG8Q04632 607 aa12.36□□□□□ -0.43
SPC25YER018C DSE3Q08729 430 aa12.36□□□□□ -0.43
SPC25YER018C STI1P15705 589 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
SPC25YER018C RDS1P25611 832 aa12.35□□□□□ -0.43
SPC25YER018C TOM71P38825 639 aaKnown RBP12.35□□□□□ -0.43
SPC25YER018C PEX19Q07418 342 aa12.35□□□□□ -0.43
SPC25YER018C CDC6P09119 513 aa12.34□□□□□ -0.43
SPC25YER018C VPS1P21576 704 aaKnown RBP12.34□□□□□ -0.43
SPC25YER018C MSP1P28737 362 aa12.34□□□□□ -0.43
SPC25YER018C GIS4Q04233 774 aa12.34□□□□□ -0.43
SPC25YER018C SUB2Q07478 446 aaKnown RBP12.34□□□□□ -0.43
SPC25YER018C OCT1P35999 772 aa12.33□□□□□ -0.44
SPC25YER018C SOL4P53315 255 aa12.33□□□□□ -0.44
SPC25YER018C SUE1Q06524 206 aa12.33□□□□□ -0.44
SPC25YER018C MYO1P08964 1928 aa12.33□□□□□ -0.44
SPC25YER018C FBP1P09201 348 aa12.32□□□□□ -0.44
SPC25YER018C PGI1P12709 554 aaKnown RBP12.32□□□□□ -0.44
SPC25YER018C LYS14P40971 790 aa12.32□□□□□ -0.44
SPC25YER018C LSB1P53281 241 aa12.32□□□□□ -0.44
SPC25YER018C SEC20P28791 383 aa12.31□□□□□ -0.44
SPC25YER018C TPM2P40414 161 aa12.31□□□□□ -0.44
SPC25YER018C HYR1P40581 163 aaKnown RBP12.31□□□□□ -0.44
SPC25YER018C HAP5Q02516 242 aa12.31□□□□□ -0.44
SPC25YER018C YML037CQ03703 340 aa12.31□□□□□ -0.44
SPC25YER018C SMD2Q06217 110 aaKnown RBP12.31□□□□□ -0.44
SPC25YER018C CSC1Q06538 782 aa12.31□□□□□ -0.44
SPC25YER018C UTP4Q06679 776 aaKnown RBP12.31□□□□□ -0.44
SPC25YER018C TYW1Q08960 810 aaKnown RBP12.31□□□□□ -0.44
SPC25YER018C DCS2Q12123 353 aa12.31□□□□□ -0.44
SPC25YER018C GET3Q12154 354 aaKnown RBP12.31□□□□□ -0.44
SPC25YER018C NBL1Q3E7Y6 73 aa12.31□□□□□ -0.44
SPC25YER018C RPL8AP17076 256 aaKnown RBP12.3□□□□□ -0.44
SPC25YER018C MBR1P23493 339 aa12.3□□□□□ -0.44
SPC25YER018C PCS60P38137 543 aaKnown RBP RIP-Chip data12.3□□□□□ -0.44not detected
SPC25YER018C ASE1P50275 885 aa12.3□□□□□ -0.44
SPC25YER018C YGL138CP53122 345 aa12.3□□□□□ -0.44
SPC25YER018C NAF1P53919 492 aaKnown RBP12.3□□□□□ -0.44
SPC25YER018C VIP1Q06685 1146 aaKnown RBP12.3□□□□□ -0.44
SPC25YER018C CEX1Q12453 761 aa12.3□□□□□ -0.44
SPC25YER018C KEX1P09620 729 aa12.29□□□□□ -0.44
SPC25YER018C RGP1P16664 663 aa12.29□□□□□ -0.44
SPC25YER018C MAK11P20484 414 aaKnown RBP12.29□□□□□ -0.44
SPC25YER018C ASF1P32447 279 aa12.29□□□□□ -0.44
SPC25YER018C CCT3P39077 534 aaKnown RBP12.29□□□□□ -0.44
SPC25YER018C CIR1P42940 261 aa12.29□□□□□ -0.44
SPC25YER018C YJL007CP47080 104 aa12.29□□□□□ -0.44
SPC25YER018C HXK1P04806 485 aaKnown RBP12.28□□□□□ -0.44
SPC25YER018C ROX1P25042 368 aa12.28□□□□□ -0.44
SPC25YER018C YDJ1P25491 409 aaKnown RBP12.28□□□□□ -0.44
SPC25YER018C PWP2P25635 923 aaKnown RBP12.28□□□□□ -0.44
SPC25YER018C VAB2P40003 282 aa12.28□□□□□ -0.44
SPC25YER018C APC11Q12157 165 aa12.28□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms